RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 CLEC17AQ6ZS10 378 aa12.95□□□□□ -0.34
LSM2-212ENST00000477182 PIAS4Q8N2W9 510 aaPredicted RBP12.95□□□□□ -0.34
LSM2-212ENST00000477182 ETNPPLQ8TBG4 499 aa12.95□□□□□ -0.34
LSM2-212ENST00000477182 GJA10Q969M2 543 aa12.95□□□□□ -0.34
LSM2-212ENST00000477182 GPRASP2Q96D09 838 aa12.95□□□□□ -0.34
LSM2-212ENST00000477182 GBP4Q96PP9 640 aa12.95□□□□□ -0.34
LSM2-212ENST00000477182 SCAND2PQ9GZW5 306 aaPredicted RBP12.95□□□□□ -0.34
LSM2-212ENST00000477182 S1PR5Q9H228 398 aa12.95□□□□□ -0.34
LSM2-212ENST00000477182 MLXIPQ9HAP2 919 aa12.95□□□□□ -0.34
LSM2-212ENST00000477182 KCNMB3Q9NPA1 279 aa12.95□□□□□ -0.34
LSM2-212ENST00000477182 KCNH7Q9NS40 1196 aa12.95□□□□□ -0.34
LSM2-212ENST00000477182 PKD2L1Q9P0L9 805 aa12.95□□□□□ -0.34
LSM2-212ENST00000477182 RCOR1Q9UKL0 485 aa12.95□□□□□ -0.34
LSM2-212ENST00000477182 PLXNA4Q9HCM2 1894 aa12.95□□□□□ -0.34
LSM2-212ENST00000477182 ACACBO00763 2458 aa12.94□□□□□ -0.34
LSM2-212ENST00000477182 PER2O15055 1255 aa12.94□□□□□ -0.34
LSM2-212ENST00000477182 STAG3L1P0CL83 205 aa12.94□□□□□ -0.34
LSM2-212ENST00000477182 GHRP10912 638 aa12.94□□□□□ -0.34
LSM2-212ENST00000477182 ANGPT1Q15389 498 aa12.94□□□□□ -0.34
LSM2-212ENST00000477182 GNPTABQ3T906 1256 aa12.94□□□□□ -0.34
LSM2-212ENST00000477182 ANKRD54Q6NXT1 300 aa12.94□□□□□ -0.34
LSM2-212ENST00000477182 NPAS4Q8IUM7 802 aa12.94□□□□□ -0.34
LSM2-212ENST00000477182 KIAA2013Q8IYS2 634 aa12.94□□□□□ -0.34
LSM2-212ENST00000477182 HAS1Q92839 578 aa12.94□□□□□ -0.34
LSM2-212ENST00000477182 NECTIN4Q96NY8 510 aa12.94□□□□□ -0.34
LSM2-212ENST00000477182 MTMR9Q96QG7 549 aa12.94□□□□□ -0.34
LSM2-212ENST00000477182 AGO4Q9HCK5 861 aaKnown RBP12.94□□□□□ -0.34
LSM2-212ENST00000477182 DLL3Q9NYJ7 618 aa12.94□□□□□ -0.34
LSM2-212ENST00000477182 PCDHB12Q9Y5F1 795 aa12.94□□□□□ -0.34
LSM2-212ENST00000477182 SPATA31C2B4DYI2 1134 aa12.93□□□□□ -0.34
LSM2-212ENST00000477182 IPO5O00410 1097 aaKnown RBP12.93□□□□□ -0.34
LSM2-212ENST00000477182 LAD1O00515 517 aa12.93□□□□□ -0.34
LSM2-212ENST00000477182 TBX3O15119 743 aa12.93□□□□□ -0.34
LSM2-212ENST00000477182 CHRNA1P02708 482 aa12.93□□□□□ -0.34
LSM2-212ENST00000477182 LGALS2P05162 132 aa12.93□□□□□ -0.34
LSM2-212ENST00000477182 SP100P23497 879 aaPredicted RBP12.93□□□□□ -0.34
LSM2-212ENST00000477182 TECP42680 631 aa12.93□□□□□ -0.34
LSM2-212ENST00000477182 TXKP42681 527 aa12.93□□□□□ -0.34
LSM2-212ENST00000477182 LPIN1Q14693 890 aa12.93□□□□□ -0.34
LSM2-212ENST00000477182 IL17AQ16552 155 aa12.93□□□□□ -0.34
LSM2-212ENST00000477182 TAF2Q6P1X5 1199 aa12.93□□□□□ -0.34
LSM2-212ENST00000477182 RSPH3Q86UC2 560 aa12.93□□□□□ -0.34
LSM2-212ENST00000477182 CCDC105Q8IYK2 499 aa12.93□□□□□ -0.34
LSM2-212ENST00000477182 SLFN12Q8IYM2 578 aa12.93□□□□□ -0.34
LSM2-212ENST00000477182 VN1R2Q8NFZ6 395 aa12.93□□□□□ -0.34
LSM2-212ENST00000477182 SLC5A5Q92911 643 aa12.93□□□□□ -0.34
LSM2-212ENST00000477182 CDHR1Q96JP9 859 aa12.93□□□□□ -0.34
LSM2-212ENST00000477182 FAM20AQ96MK3 541 aa12.93□□□□□ -0.34
LSM2-212ENST00000477182 RTP3Q9BQQ7 232 aa12.93□□□□□ -0.34
LSM2-212ENST00000477182 ZNF577Q9BSK1 485 aa12.93□□□□□ -0.34
LSM2-212ENST00000477182 FTHL17Q9BXU8 183 aa12.93□□□□□ -0.34
LSM2-212ENST00000477182 AAASQ9NRG9 546 aa12.93□□□□□ -0.34
LSM2-212ENST00000477182 SETD4Q9NVD3 440 aa12.93□□□□□ -0.34
LSM2-212ENST00000477182 FBXO2Q9UK22 296 aaPredicted RBP12.93□□□□□ -0.34
LSM2-212ENST00000477182 MYH9P35579 1960 aaKnown RBP12.92□□□□□ -0.34
LSM2-212ENST00000477182 NOP56O00567 594 aaKnown RBP12.92□□□□□ -0.34
LSM2-212ENST00000477182 SORBS3O60504 671 aa12.92□□□□□ -0.34
LSM2-212ENST00000477182 ATP9AO75110 1047 aa12.92□□□□□ -0.34
LSM2-212ENST00000477182 PPP6R2O75170 966 aa12.92□□□□□ -0.34
LSM2-212ENST00000477182 KCNA2P16389 499 aa12.92□□□□□ -0.34
LSM2-212ENST00000477182 AOC1P19801 751 aa12.92□□□□□ -0.34
LSM2-212ENST00000477182 PRPHP41219 470 aa12.92□□□□□ -0.34
LSM2-212ENST00000477182 ME1P48163 572 aa12.92□□□□□ -0.34
LSM2-212ENST00000477182 RBM10P98175 930 aaKnown RBP12.92□□□□□ -0.34
LSM2-212ENST00000477182 GRIN1Q05586 938 aa12.92□□□□□ -0.34
LSM2-212ENST00000477182 ITGB3BPQ13352 177 aaPredicted RBP12.92□□□□□ -0.34
LSM2-212ENST00000477182 LRCH2Q5VUJ6 765 aa12.92□□□□□ -0.34
LSM2-212ENST00000477182 ARL6IP4Q66PJ3 421 aaKnown RBP12.92□□□□□ -0.34
LSM2-212ENST00000477182 CES5AQ6NT32 575 aa12.92□□□□□ -0.34
LSM2-212ENST00000477182 DTHD1Q6ZMT9 781 aa12.92□□□□□ -0.34
LSM2-212ENST00000477182 FLCNQ8NFG4 579 aa12.92□□□□□ -0.34
LSM2-212ENST00000477182 CLIC6Q96NY7 704 aa12.92□□□□□ -0.34
LSM2-212ENST00000477182 TTC12Q9H892 705 aaPredicted RBP12.92□□□□□ -0.34
LSM2-212ENST00000477182 ZNF215Q9UL58 517 aaPredicted RBP12.92□□□□□ -0.34
LSM2-212ENST00000477182 SRPRBQ9Y5M8 271 aaKnown RBP12.92□□□□□ -0.34
LSM2-212ENST00000477182 MORC2Q9Y6X9 1032 aaPredicted RBP12.92□□□□□ -0.34
LSM2-212ENST00000477182 NRCAMQ92823 1304 aa12.91□□□□□ -0.34
LSM2-212ENST00000477182 ZFHX4Q86UP3 3567 aa12.91□□□□□ -0.34
LSM2-212ENST00000477182 VWA3AA6NCI4 1184 aa12.91□□□□□ -0.34
LSM2-212ENST00000477182 C2CD4DB7Z1M9 353 aa12.91□□□□□ -0.34
LSM2-212ENST00000477182 DDX39AO00148 427 aaKnown RBP12.91□□□□□ -0.34
LSM2-212ENST00000477182 MAFGO15525 162 aa12.91□□□□□ -0.34
LSM2-212ENST00000477182 GAS7O60861 476 aa12.91□□□□□ -0.34
LSM2-212ENST00000477182 PSMD10O75832 226 aa12.91□□□□□ -0.34
LSM2-212ENST00000477182 SDHBP21912 280 aa12.91□□□□□ -0.34
LSM2-212ENST00000477182 UBA1P22314 1058 aaKnown RBP12.91□□□□□ -0.34
LSM2-212ENST00000477182 ADAM17P78536 824 aa12.91□□□□□ -0.34
LSM2-212ENST00000477182 SP2Q02086 613 aa12.91□□□□□ -0.34
LSM2-212ENST00000477182 KCNC3Q14003 757 aa12.91□□□□□ -0.34
LSM2-212ENST00000477182 TPRNQ4KMQ1 711 aa12.91□□□□□ -0.34
LSM2-212ENST00000477182 PAN2Q504Q3 1202 aaKnown RBP12.91□□□□□ -0.34
LSM2-212ENST00000477182 SYCE2Q6PIF2 218 aa12.91□□□□□ -0.34
LSM2-212ENST00000477182 TSHZ1Q6ZSZ6 1077 aa12.91□□□□□ -0.34
LSM2-212ENST00000477182 KRI1Q8N9T8 703 aaKnown RBP12.91□□□□□ -0.34
LSM2-212ENST00000477182 DTWD2Q8NBA8 298 aa12.91□□□□□ -0.34
LSM2-212ENST00000477182 LMBR1Q8WVP7 490 aa12.91□□□□□ -0.34
LSM2-212ENST00000477182 RIT2Q99578 217 aa12.91□□□□□ -0.34
LSM2-212ENST00000477182 HINFPQ9BQA5 517 aa12.91□□□□□ -0.34
LSM2-212ENST00000477182 TEKT3Q9BXF9 490 aa12.91□□□□□ -0.34
LSM2-212ENST00000477182 BCAS3Q9H6U6 928 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms