RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.55□□□□□ -0.4
NUP188-205ENST00000477069 MOV10L1Q9BXT6 1211 aaKnown RBP12.55□□□□□ -0.4
NUP188-205ENST00000477069 MAF1Q9H063 256 aa12.55□□□□□ -0.4
NUP188-205ENST00000477069 TSKSQ9UJT2 592 aa12.55□□□□□ -0.4
NUP188-205ENST00000477069 DAAM1Q9Y4D1 1078 aa12.55□□□□□ -0.4
NUP188-205ENST00000477069 AFG3L2Q9Y4W6 797 aa12.55□□□□□ -0.4
NUP188-205ENST00000477069 PALMO75781 387 aa12.54□□□□□ -0.4
NUP188-205ENST00000477069 C2orf54Q08AI8 447 aa12.54□□□□□ -0.4
NUP188-205ENST00000477069 KIAA0753Q2KHM9 967 aa12.54□□□□□ -0.4
NUP188-205ENST00000477069 ANO5Q75V66 913 aa12.54□□□□□ -0.4
NUP188-205ENST00000477069 ACCSQ96QU6 501 aa12.54□□□□□ -0.4
NUP188-205ENST00000477069 INTS2Q9H0H0 1204 aaKnown RBP12.54□□□□□ -0.4
NUP188-205ENST00000477069 GGA3Q9NZ52 723 aa12.54□□□□□ -0.4
NUP188-205ENST00000477069 MYPNQ86TC9 1320 aa12.54□□□□□ -0.4
NUP188-205ENST00000477069 GRID2IPA4D2P6 1211 aa12.54□□□□□ -0.4
NUP188-205ENST00000477069 MAPK13O15264 365 aa12.54□□□□□ -0.4
NUP188-205ENST00000477069 MAFGO15525 162 aa12.54□□□□□ -0.4
NUP188-205ENST00000477069 ERLIN1O75477 346 aa12.54□□□□□ -0.4
NUP188-205ENST00000477069 FERP16591 822 aa12.54□□□□□ -0.4
NUP188-205ENST00000477069 SNRPFP62306 86 aaKnown RBP12.54□□□□□ -0.4
NUP188-205ENST00000477069 ENOX2Q16206 610 aaKnown RBP12.54□□□□□ -0.4
NUP188-205ENST00000477069 C1orf220Q5T0J3 134 aa12.54□□□□□ -0.4
NUP188-205ENST00000477069 MEI1Q5TIA1 1274 aa12.54□□□□□ -0.4
NUP188-205ENST00000477069 PLA2G4FQ68DD2 849 aa12.54□□□□□ -0.4
NUP188-205ENST00000477069 SYCP3Q8IZU3 236 aa12.54□□□□□ -0.4
NUP188-205ENST00000477069 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.54□□□□□ -0.4
NUP188-205ENST00000477069 SLC30A5Q8TAD4 765 aa12.54□□□□□ -0.4
NUP188-205ENST00000477069 SH2D3AQ9BRG2 576 aa12.54□□□□□ -0.4
NUP188-205ENST00000477069 STK33Q9BYT3 514 aa12.54□□□□□ -0.4
NUP188-205ENST00000477069 GPRC5CQ9NQ84 441 aa12.54□□□□□ -0.4
NUP188-205ENST00000477069 CYP39A1Q9NYL5 469 aa12.54□□□□□ -0.4
NUP188-205ENST00000477069 NFASCO94856 1347 aa12.53□□□□□ -0.4
NUP188-205ENST00000477069 EXOC3O60645 756 aa12.53□□□□□ -0.4
NUP188-205ENST00000477069 SOX5P35711 763 aa12.53□□□□□ -0.4
NUP188-205ENST00000477069 DLG4P78352 724 aa12.53□□□□□ -0.4
NUP188-205ENST00000477069 MYL7Q01449 175 aa12.53□□□□□ -0.4
NUP188-205ENST00000477069 DMTNQ08495 405 aa12.53□□□□□ -0.4
NUP188-205ENST00000477069 PLS1Q14651 629 aa12.53□□□□□ -0.4
NUP188-205ENST00000477069 SH3D19Q5HYK7 790 aa12.53□□□□□ -0.4
NUP188-205ENST00000477069 UTP14CQ5TAP6 766 aaKnown RBP12.53□□□□□ -0.4
NUP188-205ENST00000477069 HAUS6Q7Z4H7 955 aa12.53□□□□□ -0.4
NUP188-205ENST00000477069 GPC2Q8N158 579 aa12.53□□□□□ -0.4
NUP188-205ENST00000477069 CAGE1Q8TC20 777 aa12.53□□□□□ -0.4
NUP188-205ENST00000477069 CBWD1Q9BRT8 395 aa12.53□□□□□ -0.4
NUP188-205ENST00000477069 SUGCTQ9HAC7 445 aa12.53□□□□□ -0.4
NUP188-205ENST00000477069 APEX2Q9UBZ4 518 aa12.53□□□□□ -0.4
NUP188-205ENST00000477069 SPDYE16A6NNV3 312 aaPredicted RBP12.53□□□□□ -0.4
NUP188-205ENST00000477069 DDX3XO00571 662 aaKnown RBP eCLIP12.53□□□□□ -0.4
NUP188-205ENST00000477069 STAT1P42224 750 aa12.53□□□□□ -0.4
NUP188-205ENST00000477069 NPEPPSP55786 919 aa12.53□□□□□ -0.4
NUP188-205ENST00000477069 SPATA4Q8NEY3 305 aa12.53□□□□□ -0.4
NUP188-205ENST00000477069 LNX1Q8TBB1 728 aaPredicted RBP12.53□□□□□ -0.4
NUP188-205ENST00000477069 NSUN6Q8TEA1 469 aaKnown RBP12.53□□□□□ -0.4
NUP188-205ENST00000477069 TEX13BQ9BXU2 312 aa12.53□□□□□ -0.4
NUP188-205ENST00000477069 A1CFQ9NQ94 594 aaKnown RBP12.53□□□□□ -0.4
NUP188-205ENST00000477069 DNAJC12Q9UKB3 198 aa12.53□□□□□ -0.4
NUP188-205ENST00000477069 ZNF862O60290 1169 aa12.52□□□□□ -0.4
NUP188-205ENST00000477069 EVI5O60447 810 aa12.52□□□□□ -0.4
NUP188-205ENST00000477069 GFPT2O94808 682 aa12.52□□□□□ -0.4
NUP188-205ENST00000477069 CXCR5P32302 372 aa12.52□□□□□ -0.4
NUP188-205ENST00000477069 PDE4CQ08493 712 aa12.52□□□□□ -0.4
NUP188-205ENST00000477069 INTS8Q75QN2 995 aaKnown RBP12.52□□□□□ -0.4
NUP188-205ENST00000477069 HDXQ7Z353 690 aa12.52□□□□□ -0.4
NUP188-205ENST00000477069 NLRX1Q86UT6 975 aa12.52□□□□□ -0.4
NUP188-205ENST00000477069 LRRC57Q8N9N7 239 aa12.52□□□□□ -0.4
NUP188-205ENST00000477069 ZSWIM2Q8NEG5 633 aa12.52□□□□□ -0.4
NUP188-205ENST00000477069 PLEKHO2Q8TD55 490 aa12.52□□□□□ -0.4
NUP188-205ENST00000477069 TELO2Q9Y4R8 837 aa12.52□□□□□ -0.4
NUP188-205ENST00000477069 PCDHA10Q9Y5I2 948 aa12.52□□□□□ -0.4
NUP188-205ENST00000477069 ZBTB48P10074 688 aaPredicted RBP12.52□□□□□ -0.41
NUP188-205ENST00000477069 PEX3P56589 373 aa12.52□□□□□ -0.41
NUP188-205ENST00000477069 TERF2Q15554 542 aa12.52□□□□□ -0.41
NUP188-205ENST00000477069 EPC2Q52LR7 807 aa12.52□□□□□ -0.41
NUP188-205ENST00000477069 XKR9Q5GH70 373 aa12.52□□□□□ -0.41
NUP188-205ENST00000477069 ALKBH5Q6P6C2 394 aaKnown RBP12.52□□□□□ -0.41
NUP188-205ENST00000477069 SLC17A8Q8NDX2 589 aa12.52□□□□□ -0.41
NUP188-205ENST00000477069 TMEM161BQ8NDZ6 487 aa12.52□□□□□ -0.41
NUP188-205ENST00000477069 ACAD9Q9H845 621 aa12.52□□□□□ -0.41
NUP188-205ENST00000477069 PDLIM7Q9NR12 457 aa12.52□□□□□ -0.41
NUP188-205ENST00000477069 HSPBP1Q9NZL4 362 aa12.52□□□□□ -0.41
NUP188-205ENST00000477069 EHD2Q9NZN4 543 aa12.52□□□□□ -0.41
NUP188-205ENST00000477069 INTUQ9ULD6 942 aa12.52□□□□□ -0.41
NUP188-205ENST00000477069 USP20Q9Y2K6 914 aa12.52□□□□□ -0.41
NUP188-205ENST00000477069 PMM2O15305 246 aa12.51□□□□□ -0.41
NUP188-205ENST00000477069 SLC16A4O15374 487 aa12.51□□□□□ -0.41
NUP188-205ENST00000477069 STAM2O75886 525 aa12.51□□□□□ -0.41
NUP188-205ENST00000477069 RFX1P22670 979 aa12.51□□□□□ -0.41
NUP188-205ENST00000477069 PPP3CAQ08209 521 aa12.51□□□□□ -0.41
NUP188-205ENST00000477069 SMC1AQ14683 1233 aaKnown RBP12.51□□□□□ -0.41
NUP188-205ENST00000477069 DRAP1Q14919 205 aaPredicted RBP12.51□□□□□ -0.41
NUP188-205ENST00000477069 PHLDB3Q6NSJ2 640 aa12.51□□□□□ -0.41
NUP188-205ENST00000477069 RUBCNQ92622 972 aa12.51□□□□□ -0.41
NUP188-205ENST00000477069 UPF1Q92900 1129 aaKnown RBP eCLIP12.51□□□□□ -0.41
NUP188-205ENST00000477069 HVCN1Q96D96 273 aa12.51□□□□□ -0.41
NUP188-205ENST00000477069 PCIF1Q9H4Z3 704 aa12.51□□□□□ -0.41
NUP188-205ENST00000477069 RNF216Q9NWF9 866 aaPredicted RBP12.51□□□□□ -0.41
NUP188-205ENST00000477069 SMARCAL1Q9NZC9 954 aa12.51□□□□□ -0.41
NUP188-205ENST00000477069 PFASO15067 1338 aa12.51□□□□□ -0.41
NUP188-205ENST00000477069 A0A0A6YYK5 440 aaPredicted RBP12.51□□□□□ -0.41
NUP188-205ENST00000477069 P4HA2O15460 535 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms