RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 GAS2O43903 313 aaKnown RBP10.77□□□□□ -0.69
HDAC3-208ENST00000476739 CYP11B2P19099 503 aa10.77□□□□□ -0.69
HDAC3-208ENST00000476739 IBSPP21815 317 aaPredicted RBP10.77□□□□□ -0.69
HDAC3-208ENST00000476739 LONP1P36776 959 aaKnown RBP10.77□□□□□ -0.69
HDAC3-208ENST00000476739 DNM1Q05193 864 aaKnown RBP10.77□□□□□ -0.69
HDAC3-208ENST00000476739 CAPSQ13938 189 aa10.77□□□□□ -0.69
HDAC3-208ENST00000476739 KARSQ15046 597 aaKnown RBP10.77□□□□□ -0.69
HDAC3-208ENST00000476739 RAB30Q15771 203 aa10.77□□□□□ -0.69
HDAC3-208ENST00000476739 FAM102BQ5T8I3 360 aa10.77□□□□□ -0.69
HDAC3-208ENST00000476739 ZNF697Q5TEC3 545 aa10.77□□□□□ -0.69
HDAC3-208ENST00000476739 GPR153Q6NV75 609 aa10.77□□□□□ -0.69
HDAC3-208ENST00000476739 EXOC8Q8IYI6 725 aa10.77□□□□□ -0.69
HDAC3-208ENST00000476739 DEFB123Q8N688 67 aa10.77□□□□□ -0.69
HDAC3-208ENST00000476739 TCP11Q8WWU5 503 aa10.77□□□□□ -0.69
HDAC3-208ENST00000476739 GUCD1Q96NT3 240 aa10.77□□□□□ -0.69
HDAC3-208ENST00000476739 ADAM2Q99965 735 aa10.77□□□□□ -0.69
HDAC3-208ENST00000476739 ZBED2Q9BTP6 218 aa10.77□□□□□ -0.69
HDAC3-208ENST00000476739 FTHL17Q9BXU8 183 aa10.77□□□□□ -0.69
HDAC3-208ENST00000476739 GCOM2Q9BZD3 368 aaPredicted RBP10.77□□□□□ -0.69
HDAC3-208ENST00000476739 RGS18Q9NS28 235 aa10.77□□□□□ -0.69
HDAC3-208ENST00000476739 BLOC1S4Q9NUP1 217 aa10.77□□□□□ -0.69
HDAC3-208ENST00000476739 MSRAQ9UJ68 235 aa10.77□□□□□ -0.69
HDAC3-208ENST00000476739 DNM3Q9UQ16 869 aa10.77□□□□□ -0.69
HDAC3-208ENST00000476739 NPHP3-ACAD11A0A0J9YXS1 232 aa10.76□□□□□ -0.69
HDAC3-208ENST00000476739 C9IYK1 514 aa10.76□□□□□ -0.69
HDAC3-208ENST00000476739 SPTLC2O15270 562 aa10.76□□□□□ -0.69
HDAC3-208ENST00000476739 PDIA4P13667 645 aaKnown RBP10.76□□□□□ -0.69
HDAC3-208ENST00000476739 PLCG1P19174 1290 aa10.76□□□□□ -0.69
HDAC3-208ENST00000476739 UBA7P41226 1012 aa10.76□□□□□ -0.69
HDAC3-208ENST00000476739 GATMP50440 423 aa10.76□□□□□ -0.69
HDAC3-208ENST00000476739 SLC12A3P55017 1021 aa10.76□□□□□ -0.69
HDAC3-208ENST00000476739 PTENP60484 403 aa10.76□□□□□ -0.69
HDAC3-208ENST00000476739 HTRA4P83105 476 aaPredicted RBP10.76□□□□□ -0.69
HDAC3-208ENST00000476739 CDC42EP1Q00587 391 aa10.76□□□□□ -0.69
HDAC3-208ENST00000476739 GRIN2CQ14957 1233 aa10.76□□□□□ -0.69
HDAC3-208ENST00000476739 STK38Q15208 465 aa10.76□□□□□ -0.69
HDAC3-208ENST00000476739 RINT1Q6NUQ1 792 aa10.76□□□□□ -0.69
HDAC3-208ENST00000476739 C1orf186Q6ZWK4 172 aa10.76□□□□□ -0.69
HDAC3-208ENST00000476739 DAW1Q8N136 415 aa10.76□□□□□ -0.69
HDAC3-208ENST00000476739 ZNF710Q8N1W2 664 aa10.76□□□□□ -0.69
HDAC3-208ENST00000476739 KRI1Q8N9T8 703 aaKnown RBP10.76□□□□□ -0.69
HDAC3-208ENST00000476739 SYMPKQ92797 1274 aaKnown RBP10.76□□□□□ -0.69
HDAC3-208ENST00000476739 ZNF396Q96N95 335 aaPredicted RBP10.76□□□□□ -0.69
HDAC3-208ENST00000476739 RAD9AQ99638 391 aa10.76□□□□□ -0.69
HDAC3-208ENST00000476739 CCSER1Q9C0I3 900 aa10.76□□□□□ -0.69
HDAC3-208ENST00000476739 ZNF576Q9H609 170 aa10.76□□□□□ -0.69
HDAC3-208ENST00000476739 CERS4Q9HA82 394 aa10.76□□□□□ -0.69
HDAC3-208ENST00000476739 RC3H2Q9HBD1 1191 aaKnown RBP10.76□□□□□ -0.69
HDAC3-208ENST00000476739 MTMR10Q9NXD2 777 aa10.76□□□□□ -0.69
HDAC3-208ENST00000476739 MORC2Q9Y6X9 1032 aaPredicted RBP10.76□□□□□ -0.69
HDAC3-208ENST00000476739 CDH23Q9H251 3354 aa10.76□□□□□ -0.69
HDAC3-208ENST00000476739 A0A087X0B3 334 aa10.75□□□□□ -0.69
HDAC3-208ENST00000476739 DENND3A2RUS2 1198 aa10.75□□□□□ -0.69
HDAC3-208ENST00000476739 EPOPA6NHQ4 379 aa10.75□□□□□ -0.69
HDAC3-208ENST00000476739 ASAP2O43150 1006 aa10.75□□□□□ -0.69
HDAC3-208ENST00000476739 YEATS4O95619 227 aa10.75□□□□□ -0.69
HDAC3-208ENST00000476739 SSBP05455 408 aaKnown RBP eCLIP10.75□□□□□ -0.69
HDAC3-208ENST00000476739 PLA2G4BP0C869 781 aa10.75□□□□□ -0.69
HDAC3-208ENST00000476739 HOXA11P31270 313 aaPredicted RBP10.75□□□□□ -0.69
HDAC3-208ENST00000476739 DDIT3P35638 169 aa10.75□□□□□ -0.69
HDAC3-208ENST00000476739 SARSP49591 514 aaKnown RBP10.75□□□□□ -0.69
HDAC3-208ENST00000476739 CACNB1Q02641 598 aaPredicted RBP10.75□□□□□ -0.69
HDAC3-208ENST00000476739 TAP1Q03518 808 aa10.75□□□□□ -0.69
HDAC3-208ENST00000476739 MBTD1Q05BQ5 628 aa10.75□□□□□ -0.69
HDAC3-208ENST00000476739 RAD51AP2Q09MP3 1159 aa10.75□□□□□ -0.69
HDAC3-208ENST00000476739 MAPK7Q13164 816 aa10.75□□□□□ -0.69
HDAC3-208ENST00000476739 MCM6Q14566 821 aa10.75□□□□□ -0.69
HDAC3-208ENST00000476739 MXD4Q14582 209 aaPredicted RBP10.75□□□□□ -0.69
HDAC3-208ENST00000476739 ARSHQ5FYA8 562 aa10.75□□□□□ -0.69
HDAC3-208ENST00000476739 AXDND1Q5T1B0 1012 aaPredicted RBP10.75□□□□□ -0.69
HDAC3-208ENST00000476739 PPP2R2DQ66LE6 453 aa10.75□□□□□ -0.69
HDAC3-208ENST00000476739 SRGAP1Q7Z6B7 1085 aa10.75□□□□□ -0.69
HDAC3-208ENST00000476739 SYT2Q8N9I0 419 aaPredicted RBP10.75□□□□□ -0.69
HDAC3-208ENST00000476739 MCPH1Q8NEM0 835 aa10.75□□□□□ -0.69
HDAC3-208ENST00000476739 ZNF689Q96CS4 500 aaPredicted RBP10.75□□□□□ -0.69
HDAC3-208ENST00000476739 CDK5RAP3Q96JB5 506 aa10.75□□□□□ -0.69
HDAC3-208ENST00000476739 KIFC3Q9BVG8 833 aa10.75□□□□□ -0.69
HDAC3-208ENST00000476739 PANK2Q9BZ23 570 aa10.75□□□□□ -0.69
HDAC3-208ENST00000476739 NT5C3AQ9H0P0 336 aa10.75□□□□□ -0.69
HDAC3-208ENST00000476739 SLC28A3Q9HAS3 691 aa10.75□□□□□ -0.69
HDAC3-208ENST00000476739 ADGRA3Q8IWK6 1321 aa10.75□□□□□ -0.69
HDAC3-208ENST00000476739 TCHHQ07283 1943 aa10.74□□□□□ -0.69
HDAC3-208ENST00000476739 LINC01553A4QN01 128 aa10.74□□□□□ -0.69
HDAC3-208ENST00000476739 LRRIQ4A6NIV6 560 aa10.74□□□□□ -0.69
HDAC3-208ENST00000476739 TTLL13PA6NNM8 815 aa10.74□□□□□ -0.69
HDAC3-208ENST00000476739 SFI1A8K8P3 1242 aa10.74□□□□□ -0.69
HDAC3-208ENST00000476739 INO80B-WBP1J3KQ70 363 aa10.74□□□□□ -0.69
HDAC3-208ENST00000476739 RFXAPO00287 272 aa10.74□□□□□ -0.69
HDAC3-208ENST00000476739 B4GALT5O43286 388 aa10.74□□□□□ -0.69
HDAC3-208ENST00000476739 HIP1RO75146 1068 aa10.74□□□□□ -0.69
HDAC3-208ENST00000476739 PPP6R2O75170 966 aa10.74□□□□□ -0.69
HDAC3-208ENST00000476739 DGKIO75912 1065 aa10.74□□□□□ -0.69
HDAC3-208ENST00000476739 EDN1P05305 212 aa10.74□□□□□ -0.69
HDAC3-208ENST00000476739 ZSCAN20P17040 1043 aaPredicted RBP10.74□□□□□ -0.69
HDAC3-208ENST00000476739 ATF7P17544 494 aaPredicted RBP10.74□□□□□ -0.69
HDAC3-208ENST00000476739 SFPQP23246 707 aaKnown RBP eCLIP10.74□□□□□ -0.69
HDAC3-208ENST00000476739 DEKP35659 375 aaKnown RBP10.74□□□□□ -0.69
HDAC3-208ENST00000476739 PHKA2P46019 1235 aa10.74□□□□□ -0.69
HDAC3-208ENST00000476739 FAM189BP81408 668 aa10.74□□□□□ -0.69
HDAC3-208ENST00000476739 POU5F1BQ06416 359 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms