RNA–Protein interactions for RNA: ENST00000476658.5

DFFA-203, Transcript of DNA fragmentation factor subunit alpha, humanhuman

TSL 3

Gene DFFA, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFA-203ENST00000476658 FOXD4L6Q3SYB3 417 aaPredicted RBP16.7■□□□□ 0.26
DFFA-203ENST00000476658 FOXD4L3Q6VB84 417 aaPredicted RBP16.7■□□□□ 0.26
DFFA-203ENST00000476658 FAM43BQ6ZT52 329 aaPredicted RBP16.7■□□□□ 0.26
DFFA-203ENST00000476658 CATSPER4Q7RTX7 472 aa16.7■□□□□ 0.26
DFFA-203ENST00000476658 RASSF8Q8NHQ8 419 aa16.7■□□□□ 0.26
DFFA-203ENST00000476658 ASAP3Q8TDY4 903 aa16.7■□□□□ 0.26
DFFA-203ENST00000476658 ZNF396Q96N95 335 aaPredicted RBP16.7■□□□□ 0.26
DFFA-203ENST00000476658 NT5C3AQ9H0P0 336 aa16.7■□□□□ 0.26
DFFA-203ENST00000476658 IFT122Q9HBG6 1241 aa16.7■□□□□ 0.26
DFFA-203ENST00000476658 GPRC5CQ9NQ84 441 aa16.7■□□□□ 0.26
DFFA-203ENST00000476658 RGS18Q9NS28 235 aa16.7■□□□□ 0.26
DFFA-203ENST00000476658 C1orf112Q9NSG2 853 aa16.7■□□□□ 0.26
DFFA-203ENST00000476658 LRFN2Q9ULH4 789 aa16.7■□□□□ 0.26
DFFA-203ENST00000476658 ARHGEF15O94989 841 aa16.69■□□□□ 0.26
DFFA-203ENST00000476658 EYA4O95677 639 aa16.69■□□□□ 0.26
DFFA-203ENST00000476658 F13A1P00488 732 aa16.69■□□□□ 0.26
DFFA-203ENST00000476658 STAG3L1P0CL83 205 aa16.69■□□□□ 0.26
DFFA-203ENST00000476658 CYP11B2P19099 503 aa16.69■□□□□ 0.26
DFFA-203ENST00000476658 SARSP49591 514 aaKnown RBP16.69■□□□□ 0.26
DFFA-203ENST00000476658 HTRA4P83105 476 aaPredicted RBP16.69■□□□□ 0.26
DFFA-203ENST00000476658 TAP1Q03518 808 aa16.69■□□□□ 0.26
DFFA-203ENST00000476658 PKP1Q13835 747 aa16.69■□□□□ 0.26
DFFA-203ENST00000476658 SLC24A5Q71RS6 500 aa16.69■□□□□ 0.26
DFFA-203ENST00000476658 SRGAP1Q7Z6B7 1085 aa16.69■□□□□ 0.26
DFFA-203ENST00000476658 NPAS4Q8IUM7 802 aa16.69■□□□□ 0.26
DFFA-203ENST00000476658 CALML4Q96GE6 196 aa16.69■□□□□ 0.26
DFFA-203ENST00000476658 GUCD1Q96NT3 240 aa16.69■□□□□ 0.26
DFFA-203ENST00000476658 PNMA5Q96PV4 448 aa16.69■□□□□ 0.26
DFFA-203ENST00000476658 CDX2Q99626 313 aaPredicted RBP16.69■□□□□ 0.26
DFFA-203ENST00000476658 CERS4Q9HA82 394 aa16.69■□□□□ 0.26
DFFA-203ENST00000476658 PCDHB7Q9Y5E2 793 aa16.69■□□□□ 0.26
DFFA-203ENST00000476658 FNDC1Q4ZHG4 1894 aaPredicted RBP16.68■□□□□ 0.26
DFFA-203ENST00000476658 SSBP05455 408 aaKnown RBP eCLIP16.68■□□□□ 0.26
DFFA-203ENST00000476658 GLRA2P23416 452 aa16.68■□□□□ 0.26
DFFA-203ENST00000476658 GRB10Q13322 594 aa16.68■□□□□ 0.26
DFFA-203ENST00000476658 CAPSQ13938 189 aa16.68■□□□□ 0.26
DFFA-203ENST00000476658 DSC3Q14574 896 aa16.68■□□□□ 0.26
DFFA-203ENST00000476658 STK38Q15208 465 aa16.68■□□□□ 0.26
DFFA-203ENST00000476658 HYIQ5T013 277 aa16.68■□□□□ 0.26
DFFA-203ENST00000476658 KCNK18Q7Z418 384 aa16.68■□□□□ 0.26
DFFA-203ENST00000476658 MYLIPQ8WY64 445 aa16.68■□□□□ 0.26
DFFA-203ENST00000476658 CSRNP2Q9H175 543 aa16.68■□□□□ 0.26
DFFA-203ENST00000476658 PRDM12Q9H4Q4 367 aa16.68■□□□□ 0.26
DFFA-203ENST00000476658 MINDY3Q9H8M7 445 aa16.68■□□□□ 0.26
DFFA-203ENST00000476658 RNF216Q9NWF9 866 aaPredicted RBP16.68■□□□□ 0.26
DFFA-203ENST00000476658 TFIP11Q9UBB9 837 aaKnown RBP16.68■□□□□ 0.26
DFFA-203ENST00000476658 FBXO2Q9UK22 296 aaPredicted RBP16.68■□□□□ 0.26
DFFA-203ENST00000476658 PIN4Q9Y237 131 aaKnown RBP16.68■□□□□ 0.26
DFFA-203ENST00000476658 LINC01553A4QN01 128 aa16.67■□□□□ 0.26
DFFA-203ENST00000476658 LRRIQ4A6NIV6 560 aa16.67■□□□□ 0.26
DFFA-203ENST00000476658 C9IYK1 514 aa16.67■□□□□ 0.26
DFFA-203ENST00000476658 INO80B-WBP1J3KQ70 363 aa16.67■□□□□ 0.26
DFFA-203ENST00000476658 SLC26A4O43511 780 aa16.67■□□□□ 0.26
DFFA-203ENST00000476658 SLC34A2O95436 690 aa16.67■□□□□ 0.26
DFFA-203ENST00000476658 NASPP49321 788 aaPredicted RBP16.67■□□□□ 0.26
DFFA-203ENST00000476658 PTENP60484 403 aa16.67■□□□□ 0.26
DFFA-203ENST00000476658 SLC39A14Q15043 492 aa16.67■□□□□ 0.26
DFFA-203ENST00000476658 SPECC1Q5M775 1068 aa16.67■□□□□ 0.26
DFFA-203ENST00000476658 ARNTL2Q8WYA1 636 aa16.67■□□□□ 0.26
DFFA-203ENST00000476658 POLD4Q9HCU8 107 aa16.67■□□□□ 0.26
DFFA-203ENST00000476658 DACT1Q9NYF0 836 aa16.67■□□□□ 0.26
DFFA-203ENST00000476658 DAXXQ9UER7 740 aaPredicted RBP16.67■□□□□ 0.26
DFFA-203ENST00000476658 MTUS1Q9ULD2 1270 aa16.67■□□□□ 0.26
DFFA-203ENST00000476658 SRPRBQ9Y5M8 271 aaKnown RBP16.67■□□□□ 0.26
DFFA-203ENST00000476658 CHD7Q9P2D1 2997 aa16.67■□□□□ 0.26
DFFA-203ENST00000476658 RALGAPA2Q2PPJ7 1873 aa16.67■□□□□ 0.26
DFFA-203ENST00000476658 DGKIO75912 1065 aa16.66■□□□□ 0.26
DFFA-203ENST00000476658 ERLIN2O94905 339 aa16.66■□□□□ 0.26
DFFA-203ENST00000476658 POU5F1BQ06416 359 aa16.66■□□□□ 0.26
DFFA-203ENST00000476658 BTG3Q14201 252 aaPredicted RBP16.66■□□□□ 0.26
DFFA-203ENST00000476658 KARSQ15046 597 aaKnown RBP16.66■□□□□ 0.26
DFFA-203ENST00000476658 TMEM119Q4V9L6 283 aa16.66■□□□□ 0.26
DFFA-203ENST00000476658 TWF2Q6IBS0 349 aaKnown RBP16.66■□□□□ 0.26
DFFA-203ENST00000476658 SPRED2Q7Z698 418 aa16.66■□□□□ 0.26
DFFA-203ENST00000476658 KCTD17Q8N5Z5 321 aa16.66■□□□□ 0.26
DFFA-203ENST00000476658 SP7Q8TDD2 431 aaPredicted RBP16.66■□□□□ 0.26
DFFA-203ENST00000476658 CLIC6Q96NY7 704 aa16.66■□□□□ 0.26
DFFA-203ENST00000476658 TGS1Q96RS0 853 aaKnown RBP16.66■□□□□ 0.26
DFFA-203ENST00000476658 GAS2L1Q99501 681 aaPredicted RBP16.66■□□□□ 0.26
DFFA-203ENST00000476658 CHST12Q9NRB3 414 aa16.66■□□□□ 0.26
DFFA-203ENST00000476658 ADGRA3Q8IWK6 1321 aa16.66■□□□□ 0.26
DFFA-203ENST00000476658 CDH23Q9H251 3354 aa16.65■□□□□ 0.26
DFFA-203ENST00000476658 PLA2G4BP0C869 781 aa16.65■□□□□ 0.26
DFFA-203ENST00000476658 FOSL2P15408 326 aa16.65■□□□□ 0.26
DFFA-203ENST00000476658 TXLNAP40222 546 aa16.65■□□□□ 0.26
DFFA-203ENST00000476658 PPP2R5AQ15172 486 aa16.65■□□□□ 0.26
DFFA-203ENST00000476658 PAN2Q504Q3 1202 aaKnown RBP16.65■□□□□ 0.26
DFFA-203ENST00000476658 RINT1Q6NUQ1 792 aa16.65■□□□□ 0.26
DFFA-203ENST00000476658 IFNLR1Q8IU57 520 aaPredicted RBP16.65■□□□□ 0.26
DFFA-203ENST00000476658 ZBTB8OSQ8IWT0 167 aa16.65■□□□□ 0.26
DFFA-203ENST00000476658 CRIPAKQ8N1N5 446 aa16.65■□□□□ 0.26
DFFA-203ENST00000476658 FIBCD1Q8N539 461 aa16.65■□□□□ 0.26
DFFA-203ENST00000476658 KRI1Q8N9T8 703 aaKnown RBP16.65■□□□□ 0.26
DFFA-203ENST00000476658 RNF169Q8NCN4 708 aa16.65■□□□□ 0.26
DFFA-203ENST00000476658 LINC00301Q8NCQ3 95 aa16.65■□□□□ 0.26
DFFA-203ENST00000476658 SYMPKQ92797 1274 aaKnown RBP16.65■□□□□ 0.26
DFFA-203ENST00000476658 KIFAP3Q92845 792 aa16.65■□□□□ 0.26
DFFA-203ENST00000476658 EPSTI1Q96J88 318 aa16.65■□□□□ 0.26
DFFA-203ENST00000476658 IFT74Q96LB3 600 aa16.65■□□□□ 0.26
DFFA-203ENST00000476658 RUSC1Q9BVN2 902 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms