RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 KAT5Q92993 513 aa5.39□□□□□ -1.55
CCDC39-204ENST00000476379 INTS9Q9NV88 658 aaKnown RBP5.39□□□□□ -1.55
CCDC39-204ENST00000476379 ZHX2Q9Y6X8 837 aa5.39□□□□□ -1.55
CCDC39-204ENST00000476379 MED24O75448 989 aa5.39□□□□□ -1.55
CCDC39-204ENST00000476379 TTLL1O95922 423 aa5.39□□□□□ -1.55
CCDC39-204ENST00000476379 AFPP02771 609 aaKnown RBP5.39□□□□□ -1.55
CCDC39-204ENST00000476379 PDHA1P08559 390 aa5.39□□□□□ -1.55
CCDC39-204ENST00000476379 HOXA10P31260 410 aaPredicted RBP5.39□□□□□ -1.55
CCDC39-204ENST00000476379 ATXN3P54252 364 aaPredicted RBP5.39□□□□□ -1.55
CCDC39-204ENST00000476379 TBX2Q13207 712 aaPredicted RBP5.39□□□□□ -1.55
CCDC39-204ENST00000476379 CDKAL1Q5VV42 579 aa5.39□□□□□ -1.55
CCDC39-204ENST00000476379 HAUS3Q68CZ6 603 aa5.39□□□□□ -1.55
CCDC39-204ENST00000476379 RCSD1Q6JBY9 416 aa5.39□□□□□ -1.55
CCDC39-204ENST00000476379 ZNF365Q70YC5 407 aa5.39□□□□□ -1.55
CCDC39-204ENST00000476379 SH3BP5LQ7L8J4 393 aa5.39□□□□□ -1.55
CCDC39-204ENST00000476379 FMNL3Q8IVF7 1028 aa5.39□□□□□ -1.55
CCDC39-204ENST00000476379 SLC16A10Q8TF71 515 aa5.39□□□□□ -1.55
CCDC39-204ENST00000476379 RAD54LQ92698 747 aa5.39□□□□□ -1.55
CCDC39-204ENST00000476379 R3HDMLQ9H3Y0 253 aa5.39□□□□□ -1.55
CCDC39-204ENST00000476379 THAP9Q9H5L6 903 aa5.39□□□□□ -1.55
CCDC39-204ENST00000476379 CACNA1SQ13698 1873 aa5.39□□□□□ -1.55
CCDC39-204ENST00000476379 CCDC160A6NGH7 325 aa5.39□□□□□ -1.55
CCDC39-204ENST00000476379 LRRIQ4A6NIV6 560 aa5.39□□□□□ -1.55
CCDC39-204ENST00000476379 HNRNPDLO14979 420 aaKnown RBP5.39□□□□□ -1.55
CCDC39-204ENST00000476379 CYP26A1O43174 497 aa5.39□□□□□ -1.55
CCDC39-204ENST00000476379 THAP12O43422 761 aa5.39□□□□□ -1.55
CCDC39-204ENST00000476379 CSPG5O95196 566 aa5.39□□□□□ -1.55
CCDC39-204ENST00000476379 CELF2O95319 508 aaKnown RBP5.39□□□□□ -1.55
CCDC39-204ENST00000476379 NR3C1P04150 777 aa5.39□□□□□ -1.55
CCDC39-204ENST00000476379 RPL13P26373 211 aaKnown RBP5.39□□□□□ -1.55
CCDC39-204ENST00000476379 STX2P32856 288 aa5.39□□□□□ -1.55
CCDC39-204ENST00000476379 SARSP49591 514 aaKnown RBP5.39□□□□□ -1.55
CCDC39-204ENST00000476379 HMGCS2P54868 508 aa5.39□□□□□ -1.55
CCDC39-204ENST00000476379 MYO1EQ12965 1108 aa5.39□□□□□ -1.55
CCDC39-204ENST00000476379 CDO1Q16878 200 aa5.39□□□□□ -1.55
CCDC39-204ENST00000476379 ABCB5Q2M3G0 1257 aa5.39□□□□□ -1.55
CCDC39-204ENST00000476379 CHADLQ6NUI6 762 aa5.39□□□□□ -1.55
CCDC39-204ENST00000476379 SCYL2Q6P3W7 929 aa5.39□□□□□ -1.55
CCDC39-204ENST00000476379 GADL1Q6ZQY3 521 aa5.39□□□□□ -1.55
CCDC39-204ENST00000476379 PAF1Q8N7H5 531 aa5.39□□□□□ -1.55
CCDC39-204ENST00000476379 ZNF579Q8NAF0 562 aaKnown RBP5.39□□□□□ -1.55
CCDC39-204ENST00000476379 AGR3Q8TD06 166 aa5.39□□□□□ -1.55
CCDC39-204ENST00000476379 DHX38Q92620 1227 aaKnown RBP5.39□□□□□ -1.55
CCDC39-204ENST00000476379 FNBP1Q96RU3 617 aa5.39□□□□□ -1.55
CCDC39-204ENST00000476379 RTFDC1Q9BY42 306 aaPredicted RBP5.39□□□□□ -1.55
CCDC39-204ENST00000476379 SH2D4AQ9H788 454 aa5.39□□□□□ -1.55
CCDC39-204ENST00000476379 ZNF70Q9UC06 446 aaPredicted RBP5.39□□□□□ -1.55
CCDC39-204ENST00000476379 DAAM1Q9Y4D1 1078 aa5.39□□□□□ -1.55
CCDC39-204ENST00000476379 MYO3BQ8WXR4 1341 aa5.39□□□□□ -1.55
CCDC39-204ENST00000476379 TNRC6CQ9HCJ0 1690 aaKnown RBP5.39□□□□□ -1.55
CCDC39-204ENST00000476379 THSD7AQ9UPZ6 1657 aa5.39□□□□□ -1.55
CCDC39-204ENST00000476379 PGRMC1O00264 195 aaKnown RBP5.38□□□□□ -1.55
CCDC39-204ENST00000476379 SYF2O95926 243 aaKnown RBP5.38□□□□□ -1.55
CCDC39-204ENST00000476379 MMEP08473 750 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 KITP10721 976 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 GALCP54803 685 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 ARHGAP4P98171 946 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 RCN2Q14257 317 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 Q3C1V9 767 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 TRAPPC11Q7Z392 1133 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 MIER3Q7Z3K6 550 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 HOOK3Q86VS8 718 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 SLF2Q8IX21 1173 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 DCLK2Q8N568 766 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 GIMAP8Q8ND71 665 aaPredicted RBP5.38□□□□□ -1.55
CCDC39-204ENST00000476379 SLC20A1Q8WUM9 679 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 POMGNT1Q8WZA1 660 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 PPP1R36Q96LQ0 422 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 CCT8L2Q96SF2 557 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 FMO2Q99518 471 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 PRMT1Q99873 361 aaKnown RBP5.38□□□□□ -1.55
CCDC39-204ENST00000476379 ZNF577Q9BSK1 485 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 RUSC1Q9BVN2 902 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 ZNF341Q9BYN7 854 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 TOPORSQ9NS56 1045 aaPredicted RBP5.38□□□□□ -1.55
CCDC39-204ENST00000476379 TAS2R14Q9NYV8 317 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 NXF1Q9UBU9 619 aaKnown RBP5.38□□□□□ -1.55
CCDC39-204ENST00000476379 FAM198AQ9UFP1 575 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 AGTPBP1Q9UPW5 1226 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 TJP1Q07157 1748 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 NWD2Q9ULI1 1742 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 F5H6K3 240 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 EPHX2P34913 555 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 MARCKSL1P49006 195 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 MYL7Q01449 175 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 PPATQ06203 517 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 KLRC3Q07444 240 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 IFRD2Q12894 506 aaPredicted RBP5.38□□□□□ -1.55
CCDC39-204ENST00000476379 PSMD6Q15008 389 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 PPP2R5AQ15172 486 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 SGSM1Q2NKQ1 1148 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 SYDE2Q5VT97 1194 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 ICE2Q659A1 982 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 STYK1Q6J9G0 422 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 RINT1Q6NUQ1 792 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 DCUN1D2Q6PH85 259 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 UNC13DQ70J99 1090 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 C4orf33Q8N1A6 199 aa5.38□□□□□ -1.55
CCDC39-204ENST00000476379 EPS8L3Q8TE67 593 aaKnown RBP5.38□□□□□ -1.55
CCDC39-204ENST00000476379 C18orf8Q96DM3 657 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms