RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 XKR3Q5GH77 459 aa14.76□□□□□ -0.05
MRPL55-228ENST00000476267 ANO5Q75V66 913 aa14.76□□□□□ -0.05
MRPL55-228ENST00000476267 MIER3Q7Z3K6 550 aa14.76□□□□□ -0.05
MRPL55-228ENST00000476267 BLIDQ8IZY5 108 aa14.76□□□□□ -0.05
MRPL55-228ENST00000476267 HELQQ8TDG4 1101 aa14.76□□□□□ -0.05
MRPL55-228ENST00000476267 NLRP7Q8WX94 980 aa14.76□□□□□ -0.05
MRPL55-228ENST00000476267 ASIC4Q96FT7 647 aa14.76□□□□□ -0.05
MRPL55-228ENST00000476267 SH2D3AQ9BRG2 576 aa14.76□□□□□ -0.05
MRPL55-228ENST00000476267 ENTPD7Q9NQZ7 604 aa14.76□□□□□ -0.05
MRPL55-228ENST00000476267 CHST12Q9NRB3 414 aa14.76□□□□□ -0.05
MRPL55-228ENST00000476267 SPG21Q9NZD8 308 aa14.76□□□□□ -0.05
MRPL55-228ENST00000476267 SEPT9Q9UHD8 586 aaPredicted RBP14.76□□□□□ -0.05
MRPL55-228ENST00000476267 PUF60Q9UHX1 559 aaKnown RBP14.76□□□□□ -0.05
MRPL55-228ENST00000476267 MUC6Q6W4X9 2439 aa14.75□□□□□ -0.05
MRPL55-228ENST00000476267 A0A087WZ62 844 aa14.75□□□□□ -0.05
MRPL55-228ENST00000476267 C2orf71A6NGG8 1288 aa14.75□□□□□ -0.05
MRPL55-228ENST00000476267 SLC37A4O43826 429 aa14.75□□□□□ -0.05
MRPL55-228ENST00000476267 TECP42680 631 aa14.75□□□□□ -0.05
MRPL55-228ENST00000476267 PHKA2P46019 1235 aa14.75□□□□□ -0.05
MRPL55-228ENST00000476267 CDC42EP1Q00587 391 aa14.75□□□□□ -0.05
MRPL55-228ENST00000476267 SSRP1Q08945 709 aaKnown RBP14.75□□□□□ -0.05
MRPL55-228ENST00000476267 TMEM173Q86WV6 379 aaPredicted RBP14.75□□□□□ -0.05
MRPL55-228ENST00000476267 TRIM22Q8IYM9 498 aa14.75□□□□□ -0.05
MRPL55-228ENST00000476267 ABI1Q8IZP0 508 aa14.75□□□□□ -0.05
MRPL55-228ENST00000476267 MRPL43Q8N983 215 aaKnown RBP14.75□□□□□ -0.05
MRPL55-228ENST00000476267 PRSS33Q8NF86 280 aa14.75□□□□□ -0.05
MRPL55-228ENST00000476267 RPGRIP1Q96KN7 1286 aa14.75□□□□□ -0.05
MRPL55-228ENST00000476267 FDXACB1Q9BRP7 624 aaPredicted RBP14.75□□□□□ -0.05
MRPL55-228ENST00000476267 MRPL9Q9BYD2 267 aaKnown RBP14.75□□□□□ -0.05
MRPL55-228ENST00000476267 TM6SF1Q9BZW5 370 aa14.75□□□□□ -0.05
MRPL55-228ENST00000476267 KCNMB3Q9NPA1 279 aa14.75□□□□□ -0.05
MRPL55-228ENST00000476267 DACT1Q9NYF0 836 aa14.75□□□□□ -0.05
MRPL55-228ENST00000476267 VAV3Q9UKW4 847 aa14.75□□□□□ -0.05
MRPL55-228ENST00000476267 HCFC2Q9Y5Z7 792 aa14.75□□□□□ -0.05
MRPL55-228ENST00000476267 MEIS3P2A8K0S8 358 aa14.74□□□□□ -0.05
MRPL55-228ENST00000476267 EML1O00423 815 aa14.74□□□□□ -0.05
MRPL55-228ENST00000476267 SRGAP2BP0DMP2 458 aa14.74□□□□□ -0.05
MRPL55-228ENST00000476267 HOXB8P17481 243 aaPredicted RBP14.74□□□□□ -0.05
MRPL55-228ENST00000476267 MRE11P49959 708 aa14.74□□□□□ -0.05
MRPL55-228ENST00000476267 BCAR1P56945 870 aa14.74□□□□□ -0.05
MRPL55-228ENST00000476267 KRT17Q04695 432 aa14.74□□□□□ -0.05
MRPL55-228ENST00000476267 SIGLEC14Q08ET2 396 aa14.74□□□□□ -0.05
MRPL55-228ENST00000476267 SMC1AQ14683 1233 aaKnown RBP14.74□□□□□ -0.05
MRPL55-228ENST00000476267 GALNT17Q6IS24 598 aa14.74□□□□□ -0.05
MRPL55-228ENST00000476267 ZNF410Q86VK4 478 aa14.74□□□□□ -0.05
MRPL55-228ENST00000476267 RNF169Q8NCN4 708 aa14.74□□□□□ -0.05
MRPL55-228ENST00000476267 RSPH1Q8WYR4 309 aa14.74□□□□□ -0.05
MRPL55-228ENST00000476267 LARP6Q9BRS8 491 aaKnown RBP14.74□□□□□ -0.05
MRPL55-228ENST00000476267 PHF20Q9BVI0 1012 aa14.74□□□□□ -0.05
MRPL55-228ENST00000476267 GCOM2Q9BZD3 368 aaPredicted RBP14.74□□□□□ -0.05
MRPL55-228ENST00000476267 ZBP1Q9H171 429 aa14.74□□□□□ -0.05
MRPL55-228ENST00000476267 IFT122Q9HBG6 1241 aa14.74□□□□□ -0.05
MRPL55-228ENST00000476267 WRAP73Q9P2S5 460 aaPredicted RBP14.74□□□□□ -0.05
MRPL55-228ENST00000476267 CDH22Q9UJ99 828 aa14.74□□□□□ -0.05
MRPL55-228ENST00000476267 CYP46A1Q9Y6A2 500 aa14.74□□□□□ -0.05
MRPL55-228ENST00000476267 CLASP2O75122 1294 aaKnown RBP14.73□□□□□ -0.05
MRPL55-228ENST00000476267 ZNF623O75123 536 aa14.73□□□□□ -0.05
MRPL55-228ENST00000476267 SFPQP23246 707 aaKnown RBP eCLIP14.73□□□□□ -0.05
MRPL55-228ENST00000476267 PPP2R5CQ13362 524 aa14.73□□□□□ -0.05
MRPL55-228ENST00000476267 NONOQ15233 471 aaKnown RBP eCLIP14.73□□□□□ -0.05
MRPL55-228ENST00000476267 PTPN21Q16825 1174 aa14.73□□□□□ -0.05
MRPL55-228ENST00000476267 INF2Q27J81 1249 aa14.73□□□□□ -0.05
MRPL55-228ENST00000476267 IER5LQ5T953 404 aa14.73□□□□□ -0.05
MRPL55-228ENST00000476267 LLGL2Q6P1M3 1020 aa14.73□□□□□ -0.05
MRPL55-228ENST00000476267 TMC7Q7Z402 723 aa14.73□□□□□ -0.05
MRPL55-228ENST00000476267 KSR1Q8IVT5 923 aa14.73□□□□□ -0.05
MRPL55-228ENST00000476267 BCL7CQ8WUZ0 217 aaPredicted RBP14.73□□□□□ -0.05
MRPL55-228ENST00000476267 CASP10Q92851 521 aa14.73□□□□□ -0.05
MRPL55-228ENST00000476267 LPPQ93052 612 aa14.73□□□□□ -0.05
MRPL55-228ENST00000476267 SCLT1Q96NL6 688 aa14.73□□□□□ -0.05
MRPL55-228ENST00000476267 APOL5Q9BWW9 433 aa14.73□□□□□ -0.05
MRPL55-228ENST00000476267 FAM105AQ9NUU6 356 aa14.73□□□□□ -0.05
MRPL55-228ENST00000476267 TBC1D13Q9NVG8 400 aa14.73□□□□□ -0.05
MRPL55-228ENST00000476267 SUCLA2Q9P2R7 463 aaPredicted RBP14.73□□□□□ -0.05
MRPL55-228ENST00000476267 DDX25Q9UHL0 483 aaKnown RBP14.73□□□□□ -0.05
MRPL55-228ENST00000476267 IRAK3Q9Y616 596 aa14.73□□□□□ -0.05
MRPL55-228ENST00000476267 MYO15AQ9UKN7 3530 aa14.73□□□□□ -0.05
MRPL55-228ENST00000476267 NT5C1B-RDH14C9J2C7 533 aa14.72□□□□□ -0.05
MRPL55-228ENST00000476267 B4GALT3O60512 393 aa14.72□□□□□ -0.05
MRPL55-228ENST00000476267 PSMC5P62195 406 aa14.72□□□□□ -0.05
MRPL55-228ENST00000476267 PLA2G4FQ68DD2 849 aa14.72□□□□□ -0.05
MRPL55-228ENST00000476267 KRT25Q7Z3Z0 450 aa14.72□□□□□ -0.05
MRPL55-228ENST00000476267 RHPN2Q8IUC4 686 aa14.72□□□□□ -0.05
MRPL55-228ENST00000476267 FBXL6Q8N531 539 aa14.72□□□□□ -0.05
MRPL55-228ENST00000476267 ZNF579Q8NAF0 562 aaKnown RBP14.72□□□□□ -0.05
MRPL55-228ENST00000476267 PBXIP1Q96AQ6 731 aa14.72□□□□□ -0.05
MRPL55-228ENST00000476267 VN1R3Q9BXE9 311 aa14.72□□□□□ -0.05
MRPL55-228ENST00000476267 DHX33Q9H6R0 707 aaKnown RBP14.72□□□□□ -0.05
MRPL55-228ENST00000476267 NRDE2Q9H7Z3 1164 aa14.72□□□□□ -0.05
MRPL55-228ENST00000476267 CYP26B1Q9NR63 512 aa14.72□□□□□ -0.05
MRPL55-228ENST00000476267 KCNJ14Q9UNX9 436 aa14.72□□□□□ -0.05
MRPL55-228ENST00000476267 PIN4Q9Y237 131 aaKnown RBP14.72□□□□□ -0.05
MRPL55-228ENST00000476267 STK36Q9NRP7 1315 aa14.71□□□□□ -0.05
MRPL55-228ENST00000476267 DDX11L8A8MPP1 907 aa14.71□□□□□ -0.05
MRPL55-228ENST00000476267 CPLX1O14810 134 aa14.71□□□□□ -0.05
MRPL55-228ENST00000476267 OFD1O75665 1012 aa14.71□□□□□ -0.05
MRPL55-228ENST00000476267 ALDH7A1P49419 539 aaKnown RBP14.71□□□□□ -0.05
MRPL55-228ENST00000476267 DNM2P50570 870 aa14.71□□□□□ -0.05
MRPL55-228ENST00000476267 ITIH3Q06033 890 aa14.71□□□□□ -0.05
MRPL55-228ENST00000476267 SPIRE1Q08AE8 756 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms