RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 TBCKQ8TEA7 893 aa12.2□□□□□ -0.46
CDRT1-205ENST00000475944 TMEM169Q96HH4 297 aa12.2□□□□□ -0.46
CDRT1-205ENST00000475944 NECTIN4Q96NY8 510 aa12.2□□□□□ -0.46
CDRT1-205ENST00000475944 APOL5Q9BWW9 433 aa12.2□□□□□ -0.46
CDRT1-205ENST00000475944 INO80BQ9C086 356 aaPredicted RBP12.2□□□□□ -0.46
CDRT1-205ENST00000475944 CHST12Q9NRB3 414 aa12.2□□□□□ -0.46
CDRT1-205ENST00000475944 SEPT9Q9UHD8 586 aaPredicted RBP12.2□□□□□ -0.46
CDRT1-205ENST00000475944 HCFC2Q9Y5Z7 792 aa12.2□□□□□ -0.46
CDRT1-205ENST00000475944 PIEZO1Q92508 2521 aa12.19□□□□□ -0.46
CDRT1-205ENST00000475944 WDR81Q562E7 1941 aa12.19□□□□□ -0.46
CDRT1-205ENST00000475944 C2orf71A6NGG8 1288 aa12.19□□□□□ -0.46
CDRT1-205ENST00000475944 PSMD10O75832 226 aa12.19□□□□□ -0.46
CDRT1-205ENST00000475944 SKIP12755 728 aa12.19□□□□□ -0.46
CDRT1-205ENST00000475944 PDIA3P30101 505 aaKnown RBP12.19□□□□□ -0.46
CDRT1-205ENST00000475944 CA8P35219 290 aa12.19□□□□□ -0.46
CDRT1-205ENST00000475944 BCAR1P56945 870 aa12.19□□□□□ -0.46
CDRT1-205ENST00000475944 CCT2P78371 535 aaKnown RBP12.19□□□□□ -0.46
CDRT1-205ENST00000475944 MTERF2Q49AM1 385 aa12.19□□□□□ -0.46
CDRT1-205ENST00000475944 Q4G0T1 1027 aa12.19□□□□□ -0.46
CDRT1-205ENST00000475944 IER5LQ5T953 404 aa12.19□□□□□ -0.46
CDRT1-205ENST00000475944 ZNF410Q86VK4 478 aa12.19□□□□□ -0.46
CDRT1-205ENST00000475944 TMEM87AQ8NBN3 555 aa12.19□□□□□ -0.46
CDRT1-205ENST00000475944 ASIC4Q96FT7 647 aa12.19□□□□□ -0.46
CDRT1-205ENST00000475944 TRAIPQ9BWF2 469 aa12.19□□□□□ -0.46
CDRT1-205ENST00000475944 NIFKQ9BYG3 293 aaKnown RBP12.19□□□□□ -0.46
CDRT1-205ENST00000475944 ADAM7Q9H2U9 754 aa12.19□□□□□ -0.46
CDRT1-205ENST00000475944 EDIL3O43854 480 aa12.18□□□□□ -0.46
CDRT1-205ENST00000475944 ZC3H11AO75152 810 aaKnown RBP eCLIP12.18□□□□□ -0.46
CDRT1-205ENST00000475944 REC8O95072 547 aa12.18□□□□□ -0.46
CDRT1-205ENST00000475944 SP100P23497 879 aaPredicted RBP12.18□□□□□ -0.46
CDRT1-205ENST00000475944 PHKA2P46019 1235 aa12.18□□□□□ -0.46
CDRT1-205ENST00000475944 EVCP57679 992 aa12.18□□□□□ -0.46
CDRT1-205ENST00000475944 SSRP1Q08945 709 aaKnown RBP12.18□□□□□ -0.46
CDRT1-205ENST00000475944 DRP2Q13474 957 aa12.18□□□□□ -0.46
CDRT1-205ENST00000475944 TWF2Q6IBS0 349 aaKnown RBP12.18□□□□□ -0.46
CDRT1-205ENST00000475944 RIPOR3Q96MK2 946 aa12.18□□□□□ -0.46
CDRT1-205ENST00000475944 JPH2Q9BR39 696 aaPredicted RBP12.18□□□□□ -0.46
CDRT1-205ENST00000475944 IRF2BPLQ9H1B7 796 aa12.18□□□□□ -0.46
CDRT1-205ENST00000475944 NCOA5Q9HCD5 579 aaKnown RBP12.18□□□□□ -0.46
CDRT1-205ENST00000475944 TSHZ2Q9NRE2 1034 aa12.18□□□□□ -0.46
CDRT1-205ENST00000475944 PCDHA4Q9UN74 947 aa12.18□□□□□ -0.46
CDRT1-205ENST00000475944 PIN4Q9Y237 131 aaKnown RBP12.18□□□□□ -0.46
CDRT1-205ENST00000475944 KMT2EQ8IZD2 1858 aa12.18□□□□□ -0.46
CDRT1-205ENST00000475944 CYP3A7-CYP3A51PA0A087WV96 503 aa12.17□□□□□ -0.46
CDRT1-205ENST00000475944 A0A087WZ62 844 aa12.17□□□□□ -0.46
CDRT1-205ENST00000475944 IGKV6-21A0A0C4DH24 114 aa12.17□□□□□ -0.46
CDRT1-205ENST00000475944 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.17□□□□□ -0.46
CDRT1-205ENST00000475944 NT5C1B-RDH14C9J2C7 533 aa12.17□□□□□ -0.46
CDRT1-205ENST00000475944 CPLX1O14810 134 aa12.17□□□□□ -0.46
CDRT1-205ENST00000475944 CLASP2O75122 1294 aaKnown RBP12.17□□□□□ -0.46
CDRT1-205ENST00000475944 CSDE1O75534 798 aaKnown RBP12.17□□□□□ -0.46
CDRT1-205ENST00000475944 TDP2O95551 362 aa12.17□□□□□ -0.46
CDRT1-205ENST00000475944 CXCL14O95715 111 aa12.17□□□□□ -0.46
CDRT1-205ENST00000475944 CYP3A7P24462 503 aa12.17□□□□□ -0.46
CDRT1-205ENST00000475944 AVPR2P30518 371 aa12.17□□□□□ -0.46
CDRT1-205ENST00000475944 MTHFRP42898 656 aa12.17□□□□□ -0.46
CDRT1-205ENST00000475944 RAB27AP51159 221 aa12.17□□□□□ -0.46
CDRT1-205ENST00000475944 POLGP54098 1239 aaPredicted RBP12.17□□□□□ -0.46
CDRT1-205ENST00000475944 TCF15Q12870 199 aa12.17□□□□□ -0.46
CDRT1-205ENST00000475944 MTMR3Q13615 1198 aa12.17□□□□□ -0.46
CDRT1-205ENST00000475944 GIT2Q14161 759 aa12.17□□□□□ -0.46
CDRT1-205ENST00000475944 MOXD1Q6UVY6 613 aa12.17□□□□□ -0.46
CDRT1-205ENST00000475944 GLB1LQ6UWU2 654 aa12.17□□□□□ -0.46
CDRT1-205ENST00000475944 B3GNT9Q6UX72 402 aa12.17□□□□□ -0.46
CDRT1-205ENST00000475944 RHPN2Q8IUC4 686 aa12.17□□□□□ -0.46
CDRT1-205ENST00000475944 UBALD2Q8IYN6 164 aa12.17□□□□□ -0.46
CDRT1-205ENST00000475944 BLIDQ8IZY5 108 aa12.17□□□□□ -0.46
CDRT1-205ENST00000475944 FAM177A1Q8N128 213 aaPredicted RBP12.17□□□□□ -0.46
CDRT1-205ENST00000475944 VPS52Q8N1B4 723 aa12.17□□□□□ -0.46
CDRT1-205ENST00000475944 GJA10Q969M2 543 aa12.17□□□□□ -0.46
CDRT1-205ENST00000475944 PHOX2BQ99453 314 aa12.17□□□□□ -0.46
CDRT1-205ENST00000475944 FDXACB1Q9BRP7 624 aaPredicted RBP12.17□□□□□ -0.46
CDRT1-205ENST00000475944 ZBP1Q9H171 429 aa12.17□□□□□ -0.46
CDRT1-205ENST00000475944 POMKQ9H5K3 350 aa12.17□□□□□ -0.46
CDRT1-205ENST00000475944 DZANK1Q9NVP4 752 aa12.17□□□□□ -0.46
CDRT1-205ENST00000475944 SUCLA2Q9P2R7 463 aaPredicted RBP12.17□□□□□ -0.46
CDRT1-205ENST00000475944 SORCS3Q9UPU3 1222 aa12.17□□□□□ -0.46
CDRT1-205ENST00000475944 TMEM150BA6NC51 233 aa12.16□□□□□ -0.46
CDRT1-205ENST00000475944 DDX11L8A8MPP1 907 aa12.16□□□□□ -0.46
CDRT1-205ENST00000475944 C2CD4DB7Z1M9 353 aa12.16□□□□□ -0.46
CDRT1-205ENST00000475944 DKC1O60832 514 aaKnown RBP eCLIP12.16□□□□□ -0.46
CDRT1-205ENST00000475944 DEXIO95424 95 aa12.16□□□□□ -0.46
CDRT1-205ENST00000475944 NUBP1P53384 320 aa12.16□□□□□ -0.46
CDRT1-205ENST00000475944 VCPP55072 806 aaKnown RBP12.16□□□□□ -0.46
CDRT1-205ENST00000475944 RNASELQ05823 741 aaKnown RBP12.16□□□□□ -0.46
CDRT1-205ENST00000475944 NOMO2Q5JPE7 1267 aa12.16□□□□□ -0.46
CDRT1-205ENST00000475944 GALNT17Q6IS24 598 aa12.16□□□□□ -0.46
CDRT1-205ENST00000475944 CPLX2Q6PUV4 134 aaKnown RBP12.16□□□□□ -0.46
CDRT1-205ENST00000475944 RUFY3Q7L099 469 aa12.16□□□□□ -0.46
CDRT1-205ENST00000475944 CATSPER4Q7RTX7 472 aa12.16□□□□□ -0.46
CDRT1-205ENST00000475944 DDX53Q86TM3 631 aaKnown RBP12.16□□□□□ -0.46
CDRT1-205ENST00000475944 DAGLBQ8NCG7 672 aa12.16□□□□□ -0.46
CDRT1-205ENST00000475944 KREMEN2Q8NCW0 462 aa12.16□□□□□ -0.46
CDRT1-205ENST00000475944 NLRP4Q96MN2 994 aa12.16□□□□□ -0.46
CDRT1-205ENST00000475944 CEP89Q96ST8 783 aa12.16□□□□□ -0.46
CDRT1-205ENST00000475944 SH2D3AQ9BRG2 576 aa12.16□□□□□ -0.46
CDRT1-205ENST00000475944 FAM105AQ9NUU6 356 aa12.16□□□□□ -0.46
CDRT1-205ENST00000475944 STK39Q9UEW8 545 aa12.16□□□□□ -0.46
CDRT1-205ENST00000475944 DDX25Q9UHL0 483 aaKnown RBP12.16□□□□□ -0.46
CDRT1-205ENST00000475944 CDH22Q9UJ99 828 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms