RNA–Protein interactions for RNA: ENST00000475663.2

NIPAL3-206, Transcript of NIPA like domain containing 3, humanhuman

TSL 3

Gene NIPAL3, Length 694 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-206ENST00000475663 POLR3FQ9H1D9 316 aaPredicted RBP14.66□□□□□ -0.06
NIPAL3-206ENST00000475663 ATP6V0A4Q9HBG4 840 aa14.66□□□□□ -0.06
NIPAL3-206ENST00000475663 PIN4Q9Y237 131 aaKnown RBP14.66□□□□□ -0.06
NIPAL3-206ENST00000475663 RPA1P27694 616 aa14.65□□□□□ -0.06
NIPAL3-206ENST00000475663 FAM189BP81408 668 aa14.65□□□□□ -0.06
NIPAL3-206ENST00000475663 RILPL1Q5EBL4 403 aa14.65□□□□□ -0.06
NIPAL3-206ENST00000475663 ECHDC2Q86YB7 292 aa14.65□□□□□ -0.06
NIPAL3-206ENST00000475663 SPRYD3Q8NCJ5 442 aa14.65□□□□□ -0.06
NIPAL3-206ENST00000475663 ERMNQ8TAM6 284 aa14.65□□□□□ -0.06
NIPAL3-206ENST00000475663 LPPQ93052 612 aa14.65□□□□□ -0.06
NIPAL3-206ENST00000475663 C1orf112Q9NSG2 853 aa14.65□□□□□ -0.06
NIPAL3-206ENST00000475663 RNF19AQ9NV58 838 aa14.65□□□□□ -0.06
NIPAL3-206ENST00000475663 KIAA1024Q9UPX6 916 aa14.65□□□□□ -0.06
NIPAL3-206ENST00000475663 PPME1Q9Y570 386 aa14.65□□□□□ -0.06
NIPAL3-206ENST00000475663 ARHGEF35A5YM69 484 aa14.64□□□□□ -0.07
NIPAL3-206ENST00000475663 VWA3AA6NCI4 1184 aa14.64□□□□□ -0.07
NIPAL3-206ENST00000475663 MEIS3P2A8K0S8 358 aa14.64□□□□□ -0.07
NIPAL3-206ENST00000475663 E9PMD0 336 aa14.64□□□□□ -0.07
NIPAL3-206ENST00000475663 DGAT1O75907 488 aa14.64□□□□□ -0.07
NIPAL3-206ENST00000475663 ATF7P17544 494 aaPredicted RBP14.64□□□□□ -0.07
NIPAL3-206ENST00000475663 SYT1P21579 422 aa14.64□□□□□ -0.07
NIPAL3-206ENST00000475663 SFPQP23246 707 aaKnown RBP eCLIP14.64□□□□□ -0.07
NIPAL3-206ENST00000475663 GLRA2P23416 452 aa14.64□□□□□ -0.07
NIPAL3-206ENST00000475663 BMPR1AP36894 532 aa14.64□□□□□ -0.07
NIPAL3-206ENST00000475663 ATP2C1P98194 919 aaPredicted RBP14.64□□□□□ -0.07
NIPAL3-206ENST00000475663 CAPSQ13938 189 aa14.64□□□□□ -0.07
NIPAL3-206ENST00000475663 SPOUT1Q5T280 376 aaKnown RBP14.64□□□□□ -0.07
NIPAL3-206ENST00000475663 TWF2Q6IBS0 349 aaKnown RBP14.64□□□□□ -0.07
NIPAL3-206ENST00000475663 PADI6Q6TGC4 694 aa14.64□□□□□ -0.07
NIPAL3-206ENST00000475663 DTHD1Q6ZMT9 781 aa14.64□□□□□ -0.07
NIPAL3-206ENST00000475663 KCNK18Q7Z418 384 aa14.64□□□□□ -0.07
NIPAL3-206ENST00000475663 IGSF22Q8N9C0 903 aa14.64□□□□□ -0.07
NIPAL3-206ENST00000475663 TCP11Q8WWU5 503 aa14.64□□□□□ -0.07
NIPAL3-206ENST00000475663 NACC1Q96RE7 527 aa14.64□□□□□ -0.07
NIPAL3-206ENST00000475663 MMTAG2Q9BU76 263 aaKnown RBP14.64□□□□□ -0.07
NIPAL3-206ENST00000475663 ALG13Q9NP73 1137 aaKnown RBP14.64□□□□□ -0.07
NIPAL3-206ENST00000475663 DDX19AQ9NUU7 478 aaKnown RBP14.64□□□□□ -0.07
NIPAL3-206ENST00000475663 TMEM161AQ9NX61 479 aa14.64□□□□□ -0.07
NIPAL3-206ENST00000475663 TTC3P53804 2025 aa14.64□□□□□ -0.07
NIPAL3-206ENST00000475663 COL4A4P53420 1690 aaPredicted RBP14.63□□□□□ -0.07
NIPAL3-206ENST00000475663 H3BNC9 293 aa14.63□□□□□ -0.07
NIPAL3-206ENST00000475663 GRM6O15303 877 aa14.63□□□□□ -0.07
NIPAL3-206ENST00000475663 ARL2P36404 184 aa14.63□□□□□ -0.07
NIPAL3-206ENST00000475663 CDC42EP1Q00587 391 aa14.63□□□□□ -0.07
NIPAL3-206ENST00000475663 GRIN1Q05586 938 aa14.63□□□□□ -0.07
NIPAL3-206ENST00000475663 CLLU1OSQ5K130 101 aa14.63□□□□□ -0.07
NIPAL3-206ENST00000475663 FOXD4L5Q5VV16 416 aaPredicted RBP14.63□□□□□ -0.07
NIPAL3-206ENST00000475663 HAUS3Q68CZ6 603 aa14.63□□□□□ -0.07
NIPAL3-206ENST00000475663 CDR2LQ86X02 465 aaPredicted RBP14.63□□□□□ -0.07
NIPAL3-206ENST00000475663 EXOC8Q8IYI6 725 aa14.63□□□□□ -0.07
NIPAL3-206ENST00000475663 CMTR2Q8IYT2 770 aaKnown RBP14.63□□□□□ -0.07
NIPAL3-206ENST00000475663 ZNF710Q8N1W2 664 aa14.63□□□□□ -0.07
NIPAL3-206ENST00000475663 HELQQ8TDG4 1101 aa14.63□□□□□ -0.07
NIPAL3-206ENST00000475663 FOXD4L4Q8WXT5 416 aaPredicted RBP14.63□□□□□ -0.07
NIPAL3-206ENST00000475663 BSNDQ8WZ55 320 aa14.63□□□□□ -0.07
NIPAL3-206ENST00000475663 CPB2Q96IY4 423 aa14.63□□□□□ -0.07
NIPAL3-206ENST00000475663 BHMT2Q9H2M3 363 aa14.63□□□□□ -0.07
NIPAL3-206ENST00000475663 TYW1Q9NV66 732 aaKnown RBP14.63□□□□□ -0.07
NIPAL3-206ENST00000475663 DBR1Q9UK59 544 aaKnown RBP14.63□□□□□ -0.07
NIPAL3-206ENST00000475663 USP20Q9Y2K6 914 aa14.63□□□□□ -0.07
NIPAL3-206ENST00000475663 PRUNE2Q8WUY3 3088 aa14.63□□□□□ -0.07
NIPAL3-206ENST00000475663 PRRC2BQ5JSZ5 2229 aaKnown RBP14.62□□□□□ -0.07
NIPAL3-206ENST00000475663 LRRIQ4A6NIV6 560 aa14.62□□□□□ -0.07
NIPAL3-206ENST00000475663 INO80B-WBP1J3KQ70 363 aa14.62□□□□□ -0.07
NIPAL3-206ENST00000475663 B4GALT5O43286 388 aa14.62□□□□□ -0.07
NIPAL3-206ENST00000475663 GAS2O43903 313 aaKnown RBP14.62□□□□□ -0.07
NIPAL3-206ENST00000475663 LIG1P18858 919 aa14.62□□□□□ -0.07
NIPAL3-206ENST00000475663 PBX3P40426 434 aa14.62□□□□□ -0.07
NIPAL3-206ENST00000475663 PRPHP41219 470 aa14.62□□□□□ -0.07
NIPAL3-206ENST00000475663 PHKA2P46019 1235 aa14.62□□□□□ -0.07
NIPAL3-206ENST00000475663 TFF2Q03403 129 aa14.62□□□□□ -0.07
NIPAL3-206ENST00000475663 CEBPZQ03701 1054 aaKnown RBP14.62□□□□□ -0.07
NIPAL3-206ENST00000475663 RESTQ13127 1097 aa14.62□□□□□ -0.07
NIPAL3-206ENST00000475663 PDIA5Q14554 519 aa14.62□□□□□ -0.07
NIPAL3-206ENST00000475663 SF3A1Q15459 793 aaKnown RBP14.62□□□□□ -0.07
NIPAL3-206ENST00000475663 LRRC55Q6ZSA7 311 aa14.62□□□□□ -0.07
NIPAL3-206ENST00000475663 SRGAP1Q7Z6B7 1085 aa14.62□□□□□ -0.07
NIPAL3-206ENST00000475663 CLP1Q92989 425 aaKnown RBP14.62□□□□□ -0.07
NIPAL3-206ENST00000475663 SAMD11Q96NU1 681 aa14.62□□□□□ -0.07
NIPAL3-206ENST00000475663 CASD1Q96PB1 797 aa14.62□□□□□ -0.07
NIPAL3-206ENST00000475663 INO80BQ9C086 356 aaPredicted RBP14.62□□□□□ -0.07
NIPAL3-206ENST00000475663 CLIC4Q9Y696 253 aa14.62□□□□□ -0.07
NIPAL3-206ENST00000475663 A0A0U1RQF3 1178 aa14.61□□□□□ -0.07
NIPAL3-206ENST00000475663 LAD1O00515 517 aa14.61□□□□□ -0.07
NIPAL3-206ENST00000475663 ASAP2O43150 1006 aa14.61□□□□□ -0.07
NIPAL3-206ENST00000475663 ITGB1P05556 798 aa14.61□□□□□ -0.07
NIPAL3-206ENST00000475663 XRCC6P12956 609 aaKnown RBP eCLIP14.61□□□□□ -0.07
NIPAL3-206ENST00000475663 POU3F3P20264 500 aaPredicted RBP14.61□□□□□ -0.07
NIPAL3-206ENST00000475663 DNAJB1P25685 340 aa14.61□□□□□ -0.07
NIPAL3-206ENST00000475663 HOXA11P31270 313 aaPredicted RBP14.61□□□□□ -0.07
NIPAL3-206ENST00000475663 PTENP60484 403 aa14.61□□□□□ -0.07
NIPAL3-206ENST00000475663 MXD4Q14582 209 aaPredicted RBP14.61□□□□□ -0.07
NIPAL3-206ENST00000475663 KRT79Q5XKE5 535 aa14.61□□□□□ -0.07
NIPAL3-206ENST00000475663 BRAPQ7Z569 592 aa14.61□□□□□ -0.07
NIPAL3-206ENST00000475663 ZNF598Q86UK7 904 aaKnown RBP14.61□□□□□ -0.07
NIPAL3-206ENST00000475663 HSCBQ8IWL3 235 aa14.61□□□□□ -0.07
NIPAL3-206ENST00000475663 KLHL23Q8NBE8 558 aa14.61□□□□□ -0.07
NIPAL3-206ENST00000475663 SNX21Q969T3 373 aa14.61□□□□□ -0.07
NIPAL3-206ENST00000475663 PNMA5Q96PV4 448 aa14.61□□□□□ -0.07
NIPAL3-206ENST00000475663 KIFC3Q9BVG8 833 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms