RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 CRIPAKQ8N1N5 446 aa12.85□□□□□ -0.35
HLA-DOB-208ENST00000475235 SNRNP27Q8WVK2 155 aaKnown RBP12.85□□□□□ -0.35
HLA-DOB-208ENST00000475235 NLRP7Q8WX94 980 aa12.85□□□□□ -0.35
HLA-DOB-208ENST00000475235 SYMPKQ92797 1274 aaKnown RBP12.85□□□□□ -0.35
HLA-DOB-208ENST00000475235 CEP170P1Q96L14 293 aa12.85□□□□□ -0.35
HLA-DOB-208ENST00000475235 CEP89Q96ST8 783 aa12.85□□□□□ -0.35
HLA-DOB-208ENST00000475235 ADAM2Q99965 735 aa12.85□□□□□ -0.35
HLA-DOB-208ENST00000475235 PAIP2Q9BPZ3 127 aaKnown RBP12.85□□□□□ -0.35
HLA-DOB-208ENST00000475235 TTC12Q9H892 705 aaPredicted RBP12.85□□□□□ -0.35
HLA-DOB-208ENST00000475235 CYP26B1Q9NR63 512 aa12.85□□□□□ -0.35
HLA-DOB-208ENST00000475235 PCDHB7Q9Y5E2 793 aa12.85□□□□□ -0.35
HLA-DOB-208ENST00000475235 CHD7Q9P2D1 2997 aa12.85□□□□□ -0.35
HLA-DOB-208ENST00000475235 GBF1Q92538 1859 aa12.85□□□□□ -0.35
HLA-DOB-208ENST00000475235 TMEM150BA6NC51 233 aa12.84□□□□□ -0.35
HLA-DOB-208ENST00000475235 H3BNC9 293 aa12.84□□□□□ -0.35
HLA-DOB-208ENST00000475235 DARSP14868 501 aaKnown RBP12.84□□□□□ -0.35
HLA-DOB-208ENST00000475235 YWHABP31946 246 aaKnown RBP12.84□□□□□ -0.35
HLA-DOB-208ENST00000475235 RFC5P40937 340 aa12.84□□□□□ -0.35
HLA-DOB-208ENST00000475235 TJAP1Q5JTD0 557 aa12.84□□□□□ -0.35
HLA-DOB-208ENST00000475235 ZNF410Q86VK4 478 aa12.84□□□□□ -0.35
HLA-DOB-208ENST00000475235 CLP1Q92989 425 aaKnown RBP12.84□□□□□ -0.35
HLA-DOB-208ENST00000475235 MTMR9Q96QG7 549 aa12.84□□□□□ -0.35
HLA-DOB-208ENST00000475235 GCOM2Q9BZD3 368 aaPredicted RBP12.84□□□□□ -0.35
HLA-DOB-208ENST00000475235 INO80BQ9C086 356 aaPredicted RBP12.84□□□□□ -0.35
HLA-DOB-208ENST00000475235 ELAC1Q9H777 363 aaKnown RBP12.84□□□□□ -0.35
HLA-DOB-208ENST00000475235 MICAL3Q7RTP6 2002 aa12.83□□□□□ -0.35
HLA-DOB-208ENST00000475235 C5orf67F2Z3F1 127 aa12.83□□□□□ -0.35
HLA-DOB-208ENST00000475235 GAS2O43903 313 aaKnown RBP12.83□□□□□ -0.35
HLA-DOB-208ENST00000475235 MGEA5O60502 916 aa12.83□□□□□ -0.35
HLA-DOB-208ENST00000475235 ZRANB2O95218 330 aaKnown RBP eCLIP12.83□□□□□ -0.35
HLA-DOB-208ENST00000475235 CTNNB1P35222 781 aa12.83□□□□□ -0.35
HLA-DOB-208ENST00000475235 BMPR1AP36894 532 aa12.83□□□□□ -0.35
HLA-DOB-208ENST00000475235 TXKP42681 527 aa12.83□□□□□ -0.35
HLA-DOB-208ENST00000475235 TRAPPC10P48553 1259 aa12.83□□□□□ -0.35
HLA-DOB-208ENST00000475235 POLGP54098 1239 aaPredicted RBP12.83□□□□□ -0.35
HLA-DOB-208ENST00000475235 GPM6BQ13491 265 aa12.83□□□□□ -0.35
HLA-DOB-208ENST00000475235 AAK1Q2M2I8 961 aa12.83□□□□□ -0.35
HLA-DOB-208ENST00000475235 FOXD4L6Q3SYB3 417 aaPredicted RBP12.83□□□□□ -0.35
HLA-DOB-208ENST00000475235 PLA2G4FQ68DD2 849 aa12.83□□□□□ -0.35
HLA-DOB-208ENST00000475235 FOXD4L3Q6VB84 417 aaPredicted RBP12.83□□□□□ -0.35
HLA-DOB-208ENST00000475235 NOSTRINQ8IVI9 506 aa12.83□□□□□ -0.35
HLA-DOB-208ENST00000475235 DYDC2Q96IM9 177 aa12.83□□□□□ -0.35
HLA-DOB-208ENST00000475235 SH2D3AQ9BRG2 576 aa12.83□□□□□ -0.35
HLA-DOB-208ENST00000475235 C11orf84Q9BUA3 381 aaPredicted RBP12.83□□□□□ -0.35
HLA-DOB-208ENST00000475235 PLVAPQ9BX97 442 aa12.83□□□□□ -0.35
HLA-DOB-208ENST00000475235 TMEM161AQ9NX61 479 aa12.83□□□□□ -0.35
HLA-DOB-208ENST00000475235 RGL1Q9NZL6 768 aa12.83□□□□□ -0.35
HLA-DOB-208ENST00000475235 SUCLA2Q9P2R7 463 aaPredicted RBP12.83□□□□□ -0.35
HLA-DOB-208ENST00000475235 NOL7Q9UMY1 257 aaKnown RBP12.83□□□□□ -0.35
HLA-DOB-208ENST00000475235 COG5Q9UP83 839 aa12.83□□□□□ -0.35
HLA-DOB-208ENST00000475235 PTPRSQ13332 1948 aa12.83□□□□□ -0.36
HLA-DOB-208ENST00000475235 C9IYK1 514 aa12.83□□□□□ -0.36
HLA-DOB-208ENST00000475235 HOXA2O43364 376 aa12.83□□□□□ -0.36
HLA-DOB-208ENST00000475235 KIF1CO43896 1103 aaKnown RBP12.83□□□□□ -0.36
HLA-DOB-208ENST00000475235 SLITRK3O94933 977 aa12.83□□□□□ -0.36
HLA-DOB-208ENST00000475235 LYPLA2O95372 231 aa12.83□□□□□ -0.36
HLA-DOB-208ENST00000475235 NEFHP12036 1026 aa12.83□□□□□ -0.36
HLA-DOB-208ENST00000475235 ATP2B1P20020 1258 aa12.83□□□□□ -0.36
HLA-DOB-208ENST00000475235 SFPQP23246 707 aaKnown RBP eCLIP12.83□□□□□ -0.36
HLA-DOB-208ENST00000475235 MCM7P33993 719 aa12.83□□□□□ -0.36
HLA-DOB-208ENST00000475235 MRPS5P82675 430 aaKnown RBP12.83□□□□□ -0.36
HLA-DOB-208ENST00000475235 CYP4A11Q02928 519 aa12.83□□□□□ -0.36
HLA-DOB-208ENST00000475235 DRP2Q13474 957 aa12.83□□□□□ -0.36
HLA-DOB-208ENST00000475235 CTTNQ14247 550 aaKnown RBP12.83□□□□□ -0.36
HLA-DOB-208ENST00000475235 DSC3Q14574 896 aa12.83□□□□□ -0.36
HLA-DOB-208ENST00000475235 TIGD5Q53EQ6 642 aa12.83□□□□□ -0.36
HLA-DOB-208ENST00000475235 ARMCX6Q7L4S7 300 aa12.83□□□□□ -0.36
HLA-DOB-208ENST00000475235 RHPN2Q8IUC4 686 aa12.83□□□□□ -0.36
HLA-DOB-208ENST00000475235 TPH2Q8IWU9 490 aa12.83□□□□□ -0.36
HLA-DOB-208ENST00000475235 TCP11Q8WWU5 503 aa12.83□□□□□ -0.36
HLA-DOB-208ENST00000475235 MRPL38Q96DV4 380 aaKnown RBP12.83□□□□□ -0.36
HLA-DOB-208ENST00000475235 TBC1D32Q96NH3 1257 aa12.83□□□□□ -0.36
HLA-DOB-208ENST00000475235 HSD17B14Q9BPX1 270 aa12.83□□□□□ -0.36
HLA-DOB-208ENST00000475235 EIF2AK1Q9BQI3 630 aaKnown RBP12.83□□□□□ -0.36
HLA-DOB-208ENST00000475235 LMAN2LQ9H0V9 348 aa12.83□□□□□ -0.36
HLA-DOB-208ENST00000475235 DHX33Q9H6R0 707 aaKnown RBP12.83□□□□□ -0.36
HLA-DOB-208ENST00000475235 ATP6V0A4Q9HBG4 840 aa12.83□□□□□ -0.36
HLA-DOB-208ENST00000475235 PRDM6Q9NQX0 595 aa12.83□□□□□ -0.36
HLA-DOB-208ENST00000475235 WRAP73Q9P2S5 460 aaPredicted RBP12.83□□□□□ -0.36
HLA-DOB-208ENST00000475235 KAT6AQ92794 2004 aa12.82□□□□□ -0.36
HLA-DOB-208ENST00000475235 UNC80Q8N2C7 3258 aa12.82□□□□□ -0.36
HLA-DOB-208ENST00000475235 SIP14410 1827 aa12.82□□□□□ -0.36
HLA-DOB-208ENST00000475235 WNT7AO00755 349 aa12.82□□□□□ -0.36
HLA-DOB-208ENST00000475235 LINC00271P0C7V0 271 aa12.82□□□□□ -0.36
HLA-DOB-208ENST00000475235 NPEPPSP55786 919 aa12.82□□□□□ -0.36
HLA-DOB-208ENST00000475235 FAM189BP81408 668 aa12.82□□□□□ -0.36
HLA-DOB-208ENST00000475235 NAALADL2Q58DX5 795 aa12.82□□□□□ -0.36
HLA-DOB-208ENST00000475235 XKR9Q5GH70 373 aa12.82□□□□□ -0.36
HLA-DOB-208ENST00000475235 PSPC1Q8WXF1 523 aaKnown RBP12.82□□□□□ -0.36
HLA-DOB-208ENST00000475235 P2RX5Q93086 422 aa12.82□□□□□ -0.36
HLA-DOB-208ENST00000475235 TMX3Q96JJ7 454 aa12.82□□□□□ -0.36
HLA-DOB-208ENST00000475235 CCDC43Q96MW1 224 aaKnown RBP12.82□□□□□ -0.36
HLA-DOB-208ENST00000475235 ASB2Q96Q27 587 aa12.82□□□□□ -0.36
HLA-DOB-208ENST00000475235 MYCBPQ99417 103 aaPredicted RBP12.82□□□□□ -0.36
HLA-DOB-208ENST00000475235 COL25A1Q9BXS0 654 aaPredicted RBP12.82□□□□□ -0.36
HLA-DOB-208ENST00000475235 CHST12Q9NRB3 414 aa12.82□□□□□ -0.36
HLA-DOB-208ENST00000475235 ANKEF1Q9NU02 776 aa12.82□□□□□ -0.36
HLA-DOB-208ENST00000475235 DACT1Q9NYF0 836 aa12.82□□□□□ -0.36
HLA-DOB-208ENST00000475235 A0A087WZ62 844 aa12.81□□□□□ -0.36
HLA-DOB-208ENST00000475235 ASAP2O43150 1006 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms