RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 NSUN3Q9H649 340 aaKnown RBP13.72□□□□□ -0.21
SSR1-205ENST00000475213 ELAC1Q9H777 363 aaKnown RBP13.72□□□□□ -0.21
SSR1-205ENST00000475213 UBE2ZQ9H832 354 aaPredicted RBP13.72□□□□□ -0.21
SSR1-205ENST00000475213 ALG13Q9NP73 1137 aaKnown RBP13.72□□□□□ -0.21
SSR1-205ENST00000475213 TMEM161AQ9NX61 479 aa13.72□□□□□ -0.21
SSR1-205ENST00000475213 RGL1Q9NZL6 768 aa13.72□□□□□ -0.21
SSR1-205ENST00000475213 SUCLA2Q9P2R7 463 aaPredicted RBP13.72□□□□□ -0.21
SSR1-205ENST00000475213 PLAGL2Q9UPG8 496 aa13.72□□□□□ -0.21
SSR1-205ENST00000475213 A0A087WZ62 844 aa13.71□□□□□ -0.21
SSR1-205ENST00000475213 NEMFO60524 1076 aa13.71□□□□□ -0.21
SSR1-205ENST00000475213 FGFR1P11362 822 aa13.71□□□□□ -0.21
SSR1-205ENST00000475213 YWHABP31946 246 aaKnown RBP13.71□□□□□ -0.21
SSR1-205ENST00000475213 RBM25P49756 843 aaKnown RBP13.71□□□□□ -0.21
SSR1-205ENST00000475213 CYP4A11Q02928 519 aa13.71□□□□□ -0.21
SSR1-205ENST00000475213 CTTNQ14247 550 aaKnown RBP13.71□□□□□ -0.21
SSR1-205ENST00000475213 NAALADL2Q58DX5 795 aa13.71□□□□□ -0.21
SSR1-205ENST00000475213 RHPN2Q8IUC4 686 aa13.71□□□□□ -0.21
SSR1-205ENST00000475213 C8orf76Q96K31 380 aa13.71□□□□□ -0.21
SSR1-205ENST00000475213 CEP170P1Q96L14 293 aa13.71□□□□□ -0.21
SSR1-205ENST00000475213 NECAB3Q96P71 396 aaPredicted RBP13.71□□□□□ -0.21
SSR1-205ENST00000475213 JPH2Q9BR39 696 aaPredicted RBP13.71□□□□□ -0.21
SSR1-205ENST00000475213 FDXACB1Q9BRP7 624 aaPredicted RBP13.71□□□□□ -0.21
SSR1-205ENST00000475213 ATP6V0A4Q9HBG4 840 aa13.71□□□□□ -0.21
SSR1-205ENST00000475213 SH2B1Q9NRF2 756 aaPredicted RBP13.71□□□□□ -0.21
SSR1-205ENST00000475213 PCDHA12Q9UN75 941 aa13.71□□□□□ -0.21
SSR1-205ENST00000475213 PPME1Q9Y570 386 aa13.71□□□□□ -0.21
SSR1-205ENST00000475213 RIOK3O14730 519 aaKnown RBP13.7□□□□□ -0.22
SSR1-205ENST00000475213 ZBTB39O15060 712 aa13.7□□□□□ -0.22
SSR1-205ENST00000475213 SLITRK3O94933 977 aa13.7□□□□□ -0.22
SSR1-205ENST00000475213 ITGB1P05556 798 aa13.7□□□□□ -0.22
SSR1-205ENST00000475213 CAMK1Q14012 370 aa13.7□□□□□ -0.22
SSR1-205ENST00000475213 SAFBQ15424 915 aaKnown RBP eCLIP13.7□□□□□ -0.22
SSR1-205ENST00000475213 ZNF410Q86VK4 478 aa13.7□□□□□ -0.22
SSR1-205ENST00000475213 ECHDC2Q86YB7 292 aa13.7□□□□□ -0.22
SSR1-205ENST00000475213 KSR1Q8IVT5 923 aa13.7□□□□□ -0.22
SSR1-205ENST00000475213 EXOC8Q8IYI6 725 aa13.7□□□□□ -0.22
SSR1-205ENST00000475213 KLHL23Q8NBE8 558 aa13.7□□□□□ -0.22
SSR1-205ENST00000475213 SPPL3Q8TCT6 385 aa13.7□□□□□ -0.22
SSR1-205ENST00000475213 SLC7A3Q8WY07 619 aa13.7□□□□□ -0.22
SSR1-205ENST00000475213 MTMR9Q96QG7 549 aa13.7□□□□□ -0.22
SSR1-205ENST00000475213 EIF2AK1Q9BQI3 630 aaKnown RBP13.7□□□□□ -0.22
SSR1-205ENST00000475213 DHX33Q9H6R0 707 aaKnown RBP13.7□□□□□ -0.22
SSR1-205ENST00000475213 ZSWIM4Q9H7M6 989 aa13.7□□□□□ -0.22
SSR1-205ENST00000475213 TTC12Q9H892 705 aaPredicted RBP13.7□□□□□ -0.22
SSR1-205ENST00000475213 RNF19AQ9NV58 838 aa13.7□□□□□ -0.22
SSR1-205ENST00000475213 HCSTQ9UBK5 93 aa13.7□□□□□ -0.22
SSR1-205ENST00000475213 A0A0U1RQF3 1178 aa13.69□□□□□ -0.22
SSR1-205ENST00000475213 CSPG5O95196 566 aa13.69□□□□□ -0.22
SSR1-205ENST00000475213 ATP2B1P20020 1258 aa13.69□□□□□ -0.22
SSR1-205ENST00000475213 KCNA5P22460 613 aa13.69□□□□□ -0.22
SSR1-205ENST00000475213 DNAJB1P25685 340 aa13.69□□□□□ -0.22
SSR1-205ENST00000475213 RFC5P40937 340 aa13.69□□□□□ -0.22
SSR1-205ENST00000475213 TXKP42681 527 aa13.69□□□□□ -0.22
SSR1-205ENST00000475213 POLGP54098 1239 aaPredicted RBP13.69□□□□□ -0.22
SSR1-205ENST00000475213 HMGN5P82970 282 aaKnown RBP13.69□□□□□ -0.22
SSR1-205ENST00000475213 COL19A1Q14993 1142 aa13.69□□□□□ -0.22
SSR1-205ENST00000475213 LEXMQ3ZCV2 418 aa13.69□□□□□ -0.22
SSR1-205ENST00000475213 SPOUT1Q5T280 376 aaKnown RBP13.69□□□□□ -0.22
SSR1-205ENST00000475213 OTUD6AQ7L8S5 288 aa13.69□□□□□ -0.22
SSR1-205ENST00000475213 TPH2Q8IWU9 490 aa13.69□□□□□ -0.22
SSR1-205ENST00000475213 PABPC5Q96DU9 382 aaKnown RBP13.69□□□□□ -0.22
SSR1-205ENST00000475213 NLRP4Q96MN2 994 aa13.69□□□□□ -0.22
SSR1-205ENST00000475213 CASD1Q96PB1 797 aa13.69□□□□□ -0.22
SSR1-205ENST00000475213 HSD17B14Q9BPX1 270 aa13.69□□□□□ -0.22
SSR1-205ENST00000475213 TMEM117Q9H0C3 514 aa13.69□□□□□ -0.22
SSR1-205ENST00000475213 TMEM60Q9H2L4 133 aa13.69□□□□□ -0.22
SSR1-205ENST00000475213 CWH43Q9H720 699 aa13.69□□□□□ -0.22
SSR1-205ENST00000475213 TYW1Q9NV66 732 aaKnown RBP13.69□□□□□ -0.22
SSR1-205ENST00000475213 DACT1Q9NYF0 836 aa13.69□□□□□ -0.22
SSR1-205ENST00000475213 PCDHB12Q9Y5F1 795 aa13.69□□□□□ -0.22
SSR1-205ENST00000475213 COL4A3BPQ9Y5P4 624 aa13.69□□□□□ -0.22
SSR1-205ENST00000475213 HOXA2O43364 376 aa13.68□□□□□ -0.22
SSR1-205ENST00000475213 SFPQP23246 707 aaKnown RBP eCLIP13.68□□□□□ -0.22
SSR1-205ENST00000475213 MCM7P33993 719 aa13.68□□□□□ -0.22
SSR1-205ENST00000475213 HYAL1Q12794 435 aa13.68□□□□□ -0.22
SSR1-205ENST00000475213 XKR9Q5GH70 373 aa13.68□□□□□ -0.22
SSR1-205ENST00000475213 ZNF598Q86UK7 904 aaKnown RBP13.68□□□□□ -0.22
SSR1-205ENST00000475213 FAM184AQ8NB25 1140 aa13.68□□□□□ -0.22
SSR1-205ENST00000475213 COLGALT1Q8NBJ5 622 aa13.68□□□□□ -0.22
SSR1-205ENST00000475213 FBXO18Q8NFZ0 1043 aa13.68□□□□□ -0.22
SSR1-205ENST00000475213 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.68□□□□□ -0.22
SSR1-205ENST00000475213 NEK9Q8TD19 979 aa13.68□□□□□ -0.22
SSR1-205ENST00000475213 POF1BQ8WVV4 589 aa13.68□□□□□ -0.22
SSR1-205ENST00000475213 PRPF31Q8WWY3 499 aaKnown RBP13.68□□□□□ -0.22
SSR1-205ENST00000475213 PSPC1Q8WXF1 523 aaKnown RBP13.68□□□□□ -0.22
SSR1-205ENST00000475213 TMEM143Q96AN5 459 aa13.68□□□□□ -0.22
SSR1-205ENST00000475213 INO80BQ9C086 356 aaPredicted RBP13.68□□□□□ -0.22
SSR1-205ENST00000475213 FOXP1Q9H334 677 aaPredicted RBP13.68□□□□□ -0.22
SSR1-205ENST00000475213 IFT122Q9HBG6 1241 aa13.68□□□□□ -0.22
SSR1-205ENST00000475213 CHST12Q9NRB3 414 aa13.68□□□□□ -0.22
SSR1-205ENST00000475213 AAASQ9NRG9 546 aa13.68□□□□□ -0.22
SSR1-205ENST00000475213 C5orf42Q9H799 3197 aa13.68□□□□□ -0.22
SSR1-205ENST00000475213 POTEMA6NI47 508 aa13.67□□□□□ -0.22
SSR1-205ENST00000475213 GAS2O43903 313 aaKnown RBP13.67□□□□□ -0.22
SSR1-205ENST00000475213 LYPLA2O95372 231 aa13.67□□□□□ -0.22
SSR1-205ENST00000475213 EOMESO95936 686 aa13.67□□□□□ -0.22
SSR1-205ENST00000475213 ATF7P17544 494 aaPredicted RBP13.67□□□□□ -0.22
SSR1-205ENST00000475213 GTF2F1P35269 517 aaKnown RBP eCLIP13.67□□□□□ -0.22
SSR1-205ENST00000475213 IRS1P35568 1242 aa13.67□□□□□ -0.22
SSR1-205ENST00000475213 LAMTOR4Q0VGL1 99 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms