RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 MCM7P33993 719 aa13.26□□□□□ -0.29
CLIP2-204ENST00000474962 TBC1D8BQ0IIM8 1120 aa13.26□□□□□ -0.29
CLIP2-204ENST00000474962 CLUL1Q15846 466 aa13.26□□□□□ -0.29
CLIP2-204ENST00000474962 MTERF2Q49AM1 385 aa13.26□□□□□ -0.29
CLIP2-204ENST00000474962 NAALADL2Q58DX5 795 aa13.26□□□□□ -0.29
CLIP2-204ENST00000474962 TTC38Q5R3I4 469 aa13.26□□□□□ -0.29
CLIP2-204ENST00000474962 ODR4Q5SWX8 454 aa13.26□□□□□ -0.29
CLIP2-204ENST00000474962 SPOUT1Q5T280 376 aaKnown RBP13.26□□□□□ -0.29
CLIP2-204ENST00000474962 FOXD4L5Q5VV16 416 aaPredicted RBP13.26□□□□□ -0.29
CLIP2-204ENST00000474962 GJD3Q8N144 294 aa13.26□□□□□ -0.29
CLIP2-204ENST00000474962 POF1BQ8WVV4 589 aa13.26□□□□□ -0.29
CLIP2-204ENST00000474962 FOXD4L4Q8WXT5 416 aaPredicted RBP13.26□□□□□ -0.29
CLIP2-204ENST00000474962 MAP7D2Q96T17 732 aa13.26□□□□□ -0.29
CLIP2-204ENST00000474962 ATP6V0A4Q9HBG4 840 aa13.26□□□□□ -0.29
CLIP2-204ENST00000474962 MTMR6Q9Y217 621 aa13.26□□□□□ -0.29
CLIP2-204ENST00000474962 NCK2O43639 380 aa13.25□□□□□ -0.29
CLIP2-204ENST00000474962 NEMFO60524 1076 aa13.25□□□□□ -0.29
CLIP2-204ENST00000474962 ZSCAN22P10073 491 aaPredicted RBP13.25□□□□□ -0.29
CLIP2-204ENST00000474962 DARSP14868 501 aaKnown RBP13.25□□□□□ -0.29
CLIP2-204ENST00000474962 GPC3P51654 580 aa13.25□□□□□ -0.29
CLIP2-204ENST00000474962 ORC2Q13416 577 aaPredicted RBP13.25□□□□□ -0.29
CLIP2-204ENST00000474962 ADAM15Q13444 863 aa13.25□□□□□ -0.29
CLIP2-204ENST00000474962 ZNF174Q15697 407 aa13.25□□□□□ -0.29
CLIP2-204ENST00000474962 CALCRLQ16602 461 aa13.25□□□□□ -0.29
CLIP2-204ENST00000474962 XKR3Q5GH77 459 aa13.25□□□□□ -0.29
CLIP2-204ENST00000474962 LRRC55Q6ZSA7 311 aa13.25□□□□□ -0.29
CLIP2-204ENST00000474962 FAM43BQ6ZT52 329 aaPredicted RBP13.25□□□□□ -0.29
CLIP2-204ENST00000474962 ANO5Q75V66 913 aa13.25□□□□□ -0.29
CLIP2-204ENST00000474962 ADGRD2Q7Z7M1 963 aa13.25□□□□□ -0.29
CLIP2-204ENST00000474962 RBM23Q86U06 439 aaKnown RBP13.25□□□□□ -0.29
CLIP2-204ENST00000474962 SLFN12Q8IYM2 578 aa13.25□□□□□ -0.29
CLIP2-204ENST00000474962 ZNF579Q8NAF0 562 aaKnown RBP13.25□□□□□ -0.29
CLIP2-204ENST00000474962 RDM1Q8NG50 284 aa13.25□□□□□ -0.29
CLIP2-204ENST00000474962 NLRP7Q8WX94 980 aa13.25□□□□□ -0.29
CLIP2-204ENST00000474962 HAS1Q92839 578 aa13.25□□□□□ -0.29
CLIP2-204ENST00000474962 CWH43Q9H720 699 aa13.25□□□□□ -0.29
CLIP2-204ENST00000474962 RNF19AQ9NV58 838 aa13.25□□□□□ -0.29
CLIP2-204ENST00000474962 TMEM161AQ9NX61 479 aa13.25□□□□□ -0.29
CLIP2-204ENST00000474962 SEPT9Q9UHD8 586 aaPredicted RBP13.25□□□□□ -0.29
CLIP2-204ENST00000474962 IGKV6-21A0A0C4DH24 114 aa13.24□□□□□ -0.29
CLIP2-204ENST00000474962 ZSCAN20P17040 1043 aaPredicted RBP13.24□□□□□ -0.29
CLIP2-204ENST00000474962 SSTR3P32745 418 aaPredicted RBP13.24□□□□□ -0.29
CLIP2-204ENST00000474962 PUS10Q3MIT2 529 aaKnown RBP13.24□□□□□ -0.29
CLIP2-204ENST00000474962 PLA2G4FQ68DD2 849 aa13.24□□□□□ -0.29
CLIP2-204ENST00000474962 KSR1Q8IVT5 923 aa13.24□□□□□ -0.29
CLIP2-204ENST00000474962 RNF169Q8NCN4 708 aa13.24□□□□□ -0.29
CLIP2-204ENST00000474962 MICAL1Q8TDZ2 1067 aa13.24□□□□□ -0.29
CLIP2-204ENST00000474962 FAM20AQ96MK3 541 aa13.24□□□□□ -0.29
CLIP2-204ENST00000474962 SCLT1Q96NL6 688 aa13.24□□□□□ -0.29
CLIP2-204ENST00000474962 CASD1Q96PB1 797 aa13.24□□□□□ -0.29
CLIP2-204ENST00000474962 C1QTNF1Q9BXJ1 281 aa13.24□□□□□ -0.29
CLIP2-204ENST00000474962 ELAC1Q9H777 363 aaKnown RBP13.24□□□□□ -0.29
CLIP2-204ENST00000474962 KCNMB3Q9NPA1 279 aa13.24□□□□□ -0.29
CLIP2-204ENST00000474962 SUCLA2Q9P2R7 463 aaPredicted RBP13.24□□□□□ -0.29
CLIP2-204ENST00000474962 VAV3Q9UKW4 847 aa13.24□□□□□ -0.29
CLIP2-204ENST00000474962 PCDHB12Q9Y5F1 795 aa13.24□□□□□ -0.29
CLIP2-204ENST00000474962 WDR81Q562E7 1941 aa13.23□□□□□ -0.29
CLIP2-204ENST00000474962 RALGAPA2Q2PPJ7 1873 aa13.23□□□□□ -0.29
CLIP2-204ENST00000474962 WDFY4Q6ZS81 3184 aa13.23□□□□□ -0.29
CLIP2-204ENST00000474962 A0A087WZ62 844 aa13.23□□□□□ -0.29
CLIP2-204ENST00000474962 PI4K2BG5E9Z4 385 aa13.23□□□□□ -0.29
CLIP2-204ENST00000474962 PER2O15055 1255 aa13.23□□□□□ -0.29
CLIP2-204ENST00000474962 ZBTB39O15060 712 aa13.23□□□□□ -0.29
CLIP2-204ENST00000474962 TBX3O15119 743 aa13.23□□□□□ -0.29
CLIP2-204ENST00000474962 MAFO75444 373 aaPredicted RBP13.23□□□□□ -0.29
CLIP2-204ENST00000474962 FGF18O76093 207 aa13.23□□□□□ -0.29
CLIP2-204ENST00000474962 NRIP1P48552 1158 aa13.23□□□□□ -0.29
CLIP2-204ENST00000474962 NPEPPSP55786 919 aa13.23□□□□□ -0.29
CLIP2-204ENST00000474962 ERVFC1P60507 584 aa13.23□□□□□ -0.29
CLIP2-204ENST00000474962 PSMC5P62195 406 aa13.23□□□□□ -0.29
CLIP2-204ENST00000474962 NUCB2P80303 420 aa13.23□□□□□ -0.29
CLIP2-204ENST00000474962 PPP2R5CQ13362 524 aa13.23□□□□□ -0.29
CLIP2-204ENST00000474962 ECHDC2Q86YB7 292 aa13.23□□□□□ -0.29
CLIP2-204ENST00000474962 ZNF710Q8N1W2 664 aa13.23□□□□□ -0.29
CLIP2-204ENST00000474962 ZNF396Q96N95 335 aaPredicted RBP13.23□□□□□ -0.29
CLIP2-204ENST00000474962 FDXACB1Q9BRP7 624 aaPredicted RBP13.23□□□□□ -0.29
CLIP2-204ENST00000474962 AAASQ9NRG9 546 aa13.23□□□□□ -0.29
CLIP2-204ENST00000474962 WRAP73Q9P2S5 460 aaPredicted RBP13.23□□□□□ -0.29
CLIP2-204ENST00000474962 ATP6V1DQ9Y5K8 247 aa13.23□□□□□ -0.29
CLIP2-204ENST00000474962 A0A0U1RQF3 1178 aa13.22□□□□□ -0.29
CLIP2-204ENST00000474962 TBX10O75333 385 aa13.22□□□□□ -0.29
CLIP2-204ENST00000474962 BMP15O95972 392 aa13.22□□□□□ -0.29
CLIP2-204ENST00000474962 F13A1P00488 732 aa13.22□□□□□ -0.29
CLIP2-204ENST00000474962 PBX3P40426 434 aa13.22□□□□□ -0.29
CLIP2-204ENST00000474962 TXKP42681 527 aa13.22□□□□□ -0.29
CLIP2-204ENST00000474962 QARSP47897 775 aaKnown RBP13.22□□□□□ -0.29
CLIP2-204ENST00000474962 DNM2P50570 870 aa13.22□□□□□ -0.29
CLIP2-204ENST00000474962 RESTQ13127 1097 aa13.22□□□□□ -0.29
CLIP2-204ENST00000474962 RHPN2Q8IUC4 686 aa13.22□□□□□ -0.29
CLIP2-204ENST00000474962 COLGALT1Q8NBJ5 622 aa13.22□□□□□ -0.29
CLIP2-204ENST00000474962 LRFN3Q9BTN0 628 aa13.22□□□□□ -0.29
CLIP2-204ENST00000474962 GCOM2Q9BZD3 368 aaPredicted RBP13.22□□□□□ -0.29
CLIP2-204ENST00000474962 TMEM117Q9H0C3 514 aa13.22□□□□□ -0.29
CLIP2-204ENST00000474962 TLE6Q9H808 572 aa13.22□□□□□ -0.29
CLIP2-204ENST00000474962 C11orf16Q9NQ32 467 aa13.22□□□□□ -0.29
CLIP2-204ENST00000474962 RGL1Q9NZL6 768 aa13.22□□□□□ -0.29
CLIP2-204ENST00000474962 CLEC1BQ9P126 229 aa13.22□□□□□ -0.29
CLIP2-204ENST00000474962 PCDHA12Q9UN75 941 aa13.22□□□□□ -0.29
CLIP2-204ENST00000474962 PCDHB6Q9Y5E3 794 aa13.22□□□□□ -0.29
CLIP2-204ENST00000474962 FAM86C2PA6NEL3 165 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms