RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 TECP42680 631 aa12.48□□□□□ -0.41
CKS1B-206ENST00000474215 TFF2Q03403 129 aa12.48□□□□□ -0.41
CKS1B-206ENST00000474215 LAMTOR4Q0VGL1 99 aa12.48□□□□□ -0.41
CKS1B-206ENST00000474215 EMC2Q15006 297 aa12.48□□□□□ -0.41
CKS1B-206ENST00000474215 NAALADL2Q58DX5 795 aa12.48□□□□□ -0.41
CKS1B-206ENST00000474215 ECHDC2Q86YB7 292 aa12.48□□□□□ -0.41
CKS1B-206ENST00000474215 P2RX5Q93086 422 aa12.48□□□□□ -0.41
CKS1B-206ENST00000474215 NLRP4Q96MN2 994 aa12.48□□□□□ -0.41
CKS1B-206ENST00000474215 LMAN2LQ9H0V9 348 aa12.48□□□□□ -0.41
CKS1B-206ENST00000474215 IFT122Q9HBG6 1241 aa12.48□□□□□ -0.41
CKS1B-206ENST00000474215 DACT1Q9NYF0 836 aa12.48□□□□□ -0.41
CKS1B-206ENST00000474215 PLAGL2Q9UPG8 496 aa12.48□□□□□ -0.41
CKS1B-206ENST00000474215 LOXHD1Q8IVV2 1947 aa12.48□□□□□ -0.41
CKS1B-206ENST00000474215 A0A087WWV3 80 aa12.47□□□□□ -0.41
CKS1B-206ENST00000474215 HOXA2O43364 376 aa12.47□□□□□ -0.41
CKS1B-206ENST00000474215 FGFR1P11362 822 aa12.47□□□□□ -0.41
CKS1B-206ENST00000474215 GJB2P29033 226 aa12.47□□□□□ -0.41
CKS1B-206ENST00000474215 TOB1P50616 345 aaPredicted RBP12.47□□□□□ -0.41
CKS1B-206ENST00000474215 TIGD5Q53EQ6 642 aa12.47□□□□□ -0.41
CKS1B-206ENST00000474215 CATSPER4Q7RTX7 472 aa12.47□□□□□ -0.41
CKS1B-206ENST00000474215 FERMT3Q86UX7 667 aa12.47□□□□□ -0.41
CKS1B-206ENST00000474215 CATSPER3Q86XQ3 398 aa12.47□□□□□ -0.41
CKS1B-206ENST00000474215 C4orf32Q8N8J7 132 aa12.47□□□□□ -0.41
CKS1B-206ENST00000474215 PIGOQ8TEQ8 1089 aa12.47□□□□□ -0.41
CKS1B-206ENST00000474215 MTRQ99707 1265 aa12.47□□□□□ -0.41
CKS1B-206ENST00000474215 POLR3CQ9BUI4 534 aaPredicted RBP12.47□□□□□ -0.41
CKS1B-206ENST00000474215 TRAIPQ9BWF2 469 aa12.47□□□□□ -0.41
CKS1B-206ENST00000474215 TMEM117Q9H0C3 514 aa12.47□□□□□ -0.41
CKS1B-206ENST00000474215 TUFT1Q9NNX1 390 aa12.47□□□□□ -0.41
CKS1B-206ENST00000474215 ALG13Q9NP73 1137 aaKnown RBP12.47□□□□□ -0.41
CKS1B-206ENST00000474215 AAASQ9NRG9 546 aa12.47□□□□□ -0.41
CKS1B-206ENST00000474215 BMP2KQ9NSY1 1161 aaPredicted RBP12.47□□□□□ -0.41
CKS1B-206ENST00000474215 TYW1Q9NV66 732 aaKnown RBP12.47□□□□□ -0.41
CKS1B-206ENST00000474215 PCDHB12Q9Y5F1 795 aa12.47□□□□□ -0.41
CKS1B-206ENST00000474215 COL4A4P53420 1690 aaPredicted RBP12.47□□□□□ -0.41
CKS1B-206ENST00000474215 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.46□□□□□ -0.41
CKS1B-206ENST00000474215 MED24O75448 989 aa12.46□□□□□ -0.41
CKS1B-206ENST00000474215 DGAT1O75907 488 aa12.46□□□□□ -0.41
CKS1B-206ENST00000474215 ITGB1P05556 798 aa12.46□□□□□ -0.41
CKS1B-206ENST00000474215 BMP1P13497 986 aa12.46□□□□□ -0.41
CKS1B-206ENST00000474215 RPA1P27694 616 aa12.46□□□□□ -0.41
CKS1B-206ENST00000474215 RARRES1P49788 294 aa12.46□□□□□ -0.41
CKS1B-206ENST00000474215 MXD4Q14582 209 aaPredicted RBP12.46□□□□□ -0.41
CKS1B-206ENST00000474215 NBR1Q14596 966 aa12.46□□□□□ -0.41
CKS1B-206ENST00000474215 SPOUT1Q5T280 376 aaKnown RBP12.46□□□□□ -0.41
CKS1B-206ENST00000474215 MCTP1Q6DN14 999 aa12.46□□□□□ -0.41
CKS1B-206ENST00000474215 SRGAP1Q7Z6B7 1085 aa12.46□□□□□ -0.41
CKS1B-206ENST00000474215 ZNF598Q86UK7 904 aaKnown RBP12.46□□□□□ -0.41
CKS1B-206ENST00000474215 ABI1Q8IZP0 508 aa12.46□□□□□ -0.41
CKS1B-206ENST00000474215 KLHL23Q8NBE8 558 aa12.46□□□□□ -0.41
CKS1B-206ENST00000474215 RNF169Q8NCN4 708 aa12.46□□□□□ -0.41
CKS1B-206ENST00000474215 ERMNQ8TAM6 284 aa12.46□□□□□ -0.41
CKS1B-206ENST00000474215 SPPL3Q8TCT6 385 aa12.46□□□□□ -0.41
CKS1B-206ENST00000474215 CCDC43Q96MW1 224 aaKnown RBP12.46□□□□□ -0.41
CKS1B-206ENST00000474215 CASD1Q96PB1 797 aa12.46□□□□□ -0.41
CKS1B-206ENST00000474215 NACC1Q96RE7 527 aa12.46□□□□□ -0.41
CKS1B-206ENST00000474215 BACH2Q9BYV9 841 aa12.46□□□□□ -0.41
CKS1B-206ENST00000474215 NSUN3Q9H649 340 aaKnown RBP12.46□□□□□ -0.41
CKS1B-206ENST00000474215 XPNPEP1Q9NQW7 623 aa12.46□□□□□ -0.41
CKS1B-206ENST00000474215 RNF19AQ9NV58 838 aa12.46□□□□□ -0.41
CKS1B-206ENST00000474215 XIRP2A4UGR9 3374 aa12.46□□□□□ -0.41
CKS1B-206ENST00000474215 H3BQV1 296 aa12.45□□□□□ -0.42
CKS1B-206ENST00000474215 SKIP12755 728 aa12.45□□□□□ -0.42
CKS1B-206ENST00000474215 PHKA2P46019 1235 aa12.45□□□□□ -0.42
CKS1B-206ENST00000474215 FXR2P51116 673 aaKnown RBP eCLIP12.45□□□□□ -0.42
CKS1B-206ENST00000474215 KCNQ1P51787 676 aa12.45□□□□□ -0.42
CKS1B-206ENST00000474215 POU5F1BQ06416 359 aa12.45□□□□□ -0.42
CKS1B-206ENST00000474215 PTGDRQ13258 359 aa12.45□□□□□ -0.42
CKS1B-206ENST00000474215 CAMK1Q14012 370 aa12.45□□□□□ -0.42
CKS1B-206ENST00000474215 TFDP1Q14186 410 aa12.45□□□□□ -0.42
CKS1B-206ENST00000474215 PDIA5Q14554 519 aa12.45□□□□□ -0.42
CKS1B-206ENST00000474215 TCEAL5Q5H9L2 206 aa12.45□□□□□ -0.42
CKS1B-206ENST00000474215 TWF2Q6IBS0 349 aaKnown RBP12.45□□□□□ -0.42
CKS1B-206ENST00000474215 LRRC55Q6ZSA7 311 aa12.45□□□□□ -0.42
CKS1B-206ENST00000474215 RNF149Q8NC42 400 aa12.45□□□□□ -0.42
CKS1B-206ENST00000474215 CWH43Q9H720 699 aa12.45□□□□□ -0.42
CKS1B-206ENST00000474215 UBE2ZQ9H832 354 aaPredicted RBP12.45□□□□□ -0.42
CKS1B-206ENST00000474215 MINDY3Q9H8M7 445 aa12.45□□□□□ -0.42
CKS1B-206ENST00000474215 LRWD1Q9UFC0 647 aa12.45□□□□□ -0.42
CKS1B-206ENST00000474215 DBR1Q9UK59 544 aaKnown RBP12.45□□□□□ -0.42
CKS1B-206ENST00000474215 SMC3Q9UQE7 1217 aa12.45□□□□□ -0.42
CKS1B-206ENST00000474215 PIN4Q9Y237 131 aaKnown RBP12.45□□□□□ -0.42
CKS1B-206ENST00000474215 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.45□□□□□ -0.42
CKS1B-206ENST00000474215 PCDHB6Q9Y5E3 794 aa12.45□□□□□ -0.42
CKS1B-206ENST00000474215 LAD1O00515 517 aa12.44□□□□□ -0.42
CKS1B-206ENST00000474215 ZNF623O75123 536 aa12.44□□□□□ -0.42
CKS1B-206ENST00000474215 ATF7P17544 494 aaPredicted RBP12.44□□□□□ -0.42
CKS1B-206ENST00000474215 LAG3P18627 525 aa12.44□□□□□ -0.42
CKS1B-206ENST00000474215 MUTP22033 750 aa12.44□□□□□ -0.42
CKS1B-206ENST00000474215 DNAJB1P25685 340 aa12.44□□□□□ -0.42
CKS1B-206ENST00000474215 HOXA11P31270 313 aaPredicted RBP12.44□□□□□ -0.42
CKS1B-206ENST00000474215 ARL2P36404 184 aa12.44□□□□□ -0.42
CKS1B-206ENST00000474215 PTENP60484 403 aa12.44□□□□□ -0.42
CKS1B-206ENST00000474215 CSPP1Q1MSJ5 1256 aa12.44□□□□□ -0.42
CKS1B-206ENST00000474215 RILPL1Q5EBL4 403 aa12.44□□□□□ -0.42
CKS1B-206ENST00000474215 CLLU1OSQ5K130 101 aa12.44□□□□□ -0.42
CKS1B-206ENST00000474215 COLGALT1Q8NBJ5 622 aa12.44□□□□□ -0.42
CKS1B-206ENST00000474215 ADAMTS19Q8TE59 1207 aa12.44□□□□□ -0.42
CKS1B-206ENST00000474215 AGPAT5Q9NUQ2 364 aa12.44□□□□□ -0.42
CKS1B-206ENST00000474215 HCSTQ9UBK5 93 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms