RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 HPS3Q969F9 1004 aa11.49□□□□□ -0.57
CASC3-204ENST00000474190 PPP1R16BQ96T49 567 aa11.49□□□□□ -0.57
CASC3-204ENST00000474190 CCDC113Q9H0I3 377 aa11.49□□□□□ -0.57
CASC3-204ENST00000474190 MAGEF1Q9HAY2 307 aa11.49□□□□□ -0.57
CASC3-204ENST00000474190 ARHGAP28Q9P2N2 729 aa11.49□□□□□ -0.57
CASC3-204ENST00000474190 COL4A3BPQ9Y5P4 624 aa11.49□□□□□ -0.57
CASC3-204ENST00000474190 CDY2AQ9Y6F7 541 aa11.49□□□□□ -0.57
CASC3-204ENST00000474190 A0A087WZ62 844 aa11.48□□□□□ -0.57
CASC3-204ENST00000474190 GTPBP6O43824 516 aaPredicted RBP11.48□□□□□ -0.57
CASC3-204ENST00000474190 TIMP1P01033 207 aa11.48□□□□□ -0.57
CASC3-204ENST00000474190 CXCL10P02778 98 aa11.48□□□□□ -0.57
CASC3-204ENST00000474190 CTSHP09668 335 aa11.48□□□□□ -0.57
CASC3-204ENST00000474190 PLS3P13797 630 aa11.48□□□□□ -0.57
CASC3-204ENST00000474190 DARSP14868 501 aaKnown RBP11.48□□□□□ -0.57
CASC3-204ENST00000474190 SELPP16109 830 aa11.48□□□□□ -0.57
CASC3-204ENST00000474190 HOXA11P31270 313 aaPredicted RBP11.48□□□□□ -0.57
CASC3-204ENST00000474190 THPOP40225 353 aa11.48□□□□□ -0.57
CASC3-204ENST00000474190 NLRP11P59045 1033 aaKnown RBP11.48□□□□□ -0.57
CASC3-204ENST00000474190 PTENP60484 403 aa11.48□□□□□ -0.57
CASC3-204ENST00000474190 POU5F1BQ06416 359 aa11.48□□□□□ -0.57
CASC3-204ENST00000474190 PNOCQ13519 176 aa11.48□□□□□ -0.57
CASC3-204ENST00000474190 LPIN1Q14693 890 aa11.48□□□□□ -0.57
CASC3-204ENST00000474190 FBXO47Q5MNV8 452 aa11.48□□□□□ -0.57
CASC3-204ENST00000474190 NT5DC1Q5TFE4 455 aa11.48□□□□□ -0.57
CASC3-204ENST00000474190 C7orf61Q8IZ16 206 aa11.48□□□□□ -0.57
CASC3-204ENST00000474190 TMEM161BQ8NDZ6 487 aa11.48□□□□□ -0.57
CASC3-204ENST00000474190 CNNM3Q8NE01 707 aa11.48□□□□□ -0.57
CASC3-204ENST00000474190 SPIRE2Q8WWL2 714 aa11.48□□□□□ -0.57
CASC3-204ENST00000474190 SCLYQ96I15 445 aa11.48□□□□□ -0.57
CASC3-204ENST00000474190 LRCH3Q96II8 777 aa11.48□□□□□ -0.57
CASC3-204ENST00000474190 FDXACB1Q9BRP7 624 aaPredicted RBP11.48□□□□□ -0.57
CASC3-204ENST00000474190 TIPINQ9BVW5 301 aa11.48□□□□□ -0.57
CASC3-204ENST00000474190 NFKBIZQ9BYH8 718 aa11.48□□□□□ -0.57
CASC3-204ENST00000474190 CELF4Q9BZC1 486 aaKnown RBP11.48□□□□□ -0.57
CASC3-204ENST00000474190 PPP1R12CQ9BZL4 782 aa11.48□□□□□ -0.57
CASC3-204ENST00000474190 IKZF4Q9H2S9 585 aa11.48□□□□□ -0.57
CASC3-204ENST00000474190 HIPK3Q9H422 1215 aa11.48□□□□□ -0.57
CASC3-204ENST00000474190 TMEM39AQ9NV64 488 aa11.48□□□□□ -0.57
CASC3-204ENST00000474190 ODF2LQ9ULJ1 636 aa11.48□□□□□ -0.57
CASC3-204ENST00000474190 USP20Q9Y2K6 914 aa11.48□□□□□ -0.57
CASC3-204ENST00000474190 NOC2LQ9Y3T9 749 aaKnown RBP11.48□□□□□ -0.57
CASC3-204ENST00000474190 TRIP12Q14669 1992 aaPredicted RBP11.47□□□□□ -0.57
CASC3-204ENST00000474190 ABLIM1O14639 778 aa11.47□□□□□ -0.57
CASC3-204ENST00000474190 FGFR4P22455 802 aa11.47□□□□□ -0.57
CASC3-204ENST00000474190 NAMPTP43490 491 aa11.47□□□□□ -0.57
CASC3-204ENST00000474190 CRYBB1P53674 252 aaPredicted RBP11.47□□□□□ -0.57
CASC3-204ENST00000474190 NCKAP1LP55160 1127 aa11.47□□□□□ -0.57
CASC3-204ENST00000474190 CCL23P55773 120 aa11.47□□□□□ -0.57
CASC3-204ENST00000474190 MBTD1Q05BQ5 628 aa11.47□□□□□ -0.57
CASC3-204ENST00000474190 KCNA1Q09470 495 aa11.47□□□□□ -0.57
CASC3-204ENST00000474190 COASYQ13057 564 aa11.47□□□□□ -0.57
CASC3-204ENST00000474190 POSTNQ15063 836 aa11.47□□□□□ -0.57
CASC3-204ENST00000474190 NFKBIBQ15653 356 aa11.47□□□□□ -0.57
CASC3-204ENST00000474190 RBM43Q6ZSC3 357 aaKnown RBP11.47□□□□□ -0.57
CASC3-204ENST00000474190 UNC13DQ70J99 1090 aa11.47□□□□□ -0.57
CASC3-204ENST00000474190 LRRC8DQ7L1W4 858 aa11.47□□□□□ -0.57
CASC3-204ENST00000474190 EPM2AIP1Q7L775 607 aaPredicted RBP11.47□□□□□ -0.57
CASC3-204ENST00000474190 ZNF410Q86VK4 478 aa11.47□□□□□ -0.57
CASC3-204ENST00000474190 FAM228AQ86W67 206 aa11.47□□□□□ -0.57
CASC3-204ENST00000474190 SFR1Q86XK3 245 aa11.47□□□□□ -0.57
CASC3-204ENST00000474190 RHPN2Q8IUC4 686 aa11.47□□□□□ -0.57
CASC3-204ENST00000474190 RNF149Q8NC42 400 aa11.47□□□□□ -0.57
CASC3-204ENST00000474190 RETREG2Q8NC44 543 aa11.47□□□□□ -0.57
CASC3-204ENST00000474190 KIAA0895Q8NCT3 520 aa11.47□□□□□ -0.57
CASC3-204ENST00000474190 RASSF8Q8NHQ8 419 aa11.47□□□□□ -0.57
CASC3-204ENST00000474190 PSPC1Q8WXF1 523 aaKnown RBP11.47□□□□□ -0.57
CASC3-204ENST00000474190 LINC01599Q8WXQ3 324 aa11.47□□□□□ -0.57
CASC3-204ENST00000474190 DPF3Q92784 378 aa11.47□□□□□ -0.57
CASC3-204ENST00000474190 KIFAP3Q92845 792 aa11.47□□□□□ -0.57
CASC3-204ENST00000474190 OSMRQ99650 979 aa11.47□□□□□ -0.57
CASC3-204ENST00000474190 JPH2Q9BR39 696 aaPredicted RBP11.47□□□□□ -0.57
CASC3-204ENST00000474190 PYM1Q9BRP8 204 aaKnown RBP11.47□□□□□ -0.57
CASC3-204ENST00000474190 TMX1Q9H3N1 280 aa11.47□□□□□ -0.57
CASC3-204ENST00000474190 FZD8Q9H461 694 aa11.47□□□□□ -0.57
CASC3-204ENST00000474190 CLSTN2Q9H4D0 955 aa11.47□□□□□ -0.57
CASC3-204ENST00000474190 TMEM63CQ9P1W3 806 aa11.47□□□□□ -0.57
CASC3-204ENST00000474190 AKT3Q9Y243 479 aa11.47□□□□□ -0.57
CASC3-204ENST00000474190 PCDHA5Q9Y5H7 936 aa11.47□□□□□ -0.57
CASC3-204ENST00000474190 TRPV2Q9Y5S1 764 aa11.47□□□□□ -0.57
CASC3-204ENST00000474190 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.46□□□□□ -0.57
CASC3-204ENST00000474190 PVALEFA0A1B0GWK0 134 aa11.46□□□□□ -0.57
CASC3-204ENST00000474190 GOLGA6L4A6NEF3 574 aa11.46□□□□□ -0.57
CASC3-204ENST00000474190 TLR3O15455 904 aaKnown RBP11.46□□□□□ -0.57
CASC3-204ENST00000474190 SRGAP2CP0DJJ0 459 aa11.46□□□□□ -0.57
CASC3-204ENST00000474190 MAPTP10636 758 aaKnown RBP11.46□□□□□ -0.57
CASC3-204ENST00000474190 SYN1P17600 705 aa11.46□□□□□ -0.57
CASC3-204ENST00000474190 TMOD1P28289 359 aa11.46□□□□□ -0.57
CASC3-204ENST00000474190 NMT1P30419 496 aaKnown RBP11.46□□□□□ -0.57
CASC3-204ENST00000474190 PEX3P56589 373 aa11.46□□□□□ -0.57
CASC3-204ENST00000474190 STK4Q13043 487 aa11.46□□□□□ -0.57
CASC3-204ENST00000474190 MXD4Q14582 209 aaPredicted RBP11.46□□□□□ -0.57
CASC3-204ENST00000474190 KMT5BQ4FZB7 885 aa11.46□□□□□ -0.57
CASC3-204ENST00000474190 MFSD5Q6N075 450 aa11.46□□□□□ -0.57
CASC3-204ENST00000474190 ZNF720Q7Z2F6 126 aa11.46□□□□□ -0.57
CASC3-204ENST00000474190 RTN4RL1Q86UN2 441 aaPredicted RBP11.46□□□□□ -0.57
CASC3-204ENST00000474190 EXOC8Q8IYI6 725 aa11.46□□□□□ -0.57
CASC3-204ENST00000474190 TCP11Q8WWU5 503 aa11.46□□□□□ -0.57
CASC3-204ENST00000474190 HTATIP2Q9BUP3 242 aa11.46□□□□□ -0.57
CASC3-204ENST00000474190 ST6GALNAC4Q9H4F1 302 aa11.46□□□□□ -0.57
CASC3-204ENST00000474190 C17orf75Q9HAS0 396 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms