RNA–Protein interactions for RNA: ENST00000473782.1

HPS4-210, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-210ENST00000473782 ERICH2A1L162 156 aa18.41■□□□□ 0.54
HPS4-210ENST00000473782 E7EWF7 191 aa18.41■□□□□ 0.54
HPS4-210ENST00000473782 ZC3H11AO75152 810 aaKnown RBP eCLIP18.41■□□□□ 0.54
HPS4-210ENST00000473782 PTH1RQ03431 593 aa18.41■□□□□ 0.54
HPS4-210ENST00000473782 VARS2Q5ST30 1063 aaKnown RBP18.41■□□□□ 0.54
HPS4-210ENST00000473782 FAM160B1Q5W0V3 765 aa18.41■□□□□ 0.54
HPS4-210ENST00000473782 MB21D2Q8IYB1 491 aaPredicted RBP18.41■□□□□ 0.54
HPS4-210ENST00000473782 CMASQ8NFW8 434 aaPredicted RBP18.41■□□□□ 0.54
HPS4-210ENST00000473782 BBXQ8WY36 941 aaPredicted RBP18.41■□□□□ 0.54
HPS4-210ENST00000473782 MRPL9Q9BYD2 267 aaKnown RBP18.41■□□□□ 0.54
HPS4-210ENST00000473782 FOXQ1Q9C009 403 aa18.41■□□□□ 0.54
HPS4-210ENST00000473782 DNAJB4Q9UDY4 337 aa18.41■□□□□ 0.54
HPS4-210ENST00000473782 DOCK8Q8NF50 2099 aa18.4■□□□□ 0.54
HPS4-210ENST00000473782 HIP1O00291 1037 aa18.4■□□□□ 0.54
HPS4-210ENST00000473782 DDAH1O94760 285 aa18.4■□□□□ 0.54
HPS4-210ENST00000473782 PAPLNO95428 1278 aa18.4■□□□□ 0.54
HPS4-210ENST00000473782 DARSP14868 501 aaKnown RBP18.4■□□□□ 0.54
HPS4-210ENST00000473782 SLC11A1P49279 550 aa18.4■□□□□ 0.54
HPS4-210ENST00000473782 ST3GAL2Q16842 350 aa18.4■□□□□ 0.54
HPS4-210ENST00000473782 TMEM87AQ8NBN3 555 aa18.4■□□□□ 0.54
HPS4-210ENST00000473782 CTCFLQ8NI51 663 aaPredicted RBP18.4■□□□□ 0.54
HPS4-210ENST00000473782 LPPQ93052 612 aa18.4■□□□□ 0.54
HPS4-210ENST00000473782 LZTS2Q9BRK4 669 aa18.4■□□□□ 0.54
HPS4-210ENST00000473782 RHOBTB2Q9BYZ6 727 aa18.4■□□□□ 0.54
HPS4-210ENST00000473782 ARHGEF3Q9NR81 526 aa18.4■□□□□ 0.54
HPS4-210ENST00000473782 TBC1D13Q9NVG8 400 aa18.4■□□□□ 0.54
HPS4-210ENST00000473782 COL4A3Q01955 1670 aa18.4■□□□□ 0.54
HPS4-210ENST00000473782 DCDC2BA2VCK2 349 aa18.39■□□□□ 0.53
HPS4-210ENST00000473782 CSDE1O75534 798 aaKnown RBP18.39■□□□□ 0.53
HPS4-210ENST00000473782 KLRC2P26717 231 aa18.39■□□□□ 0.53
HPS4-210ENST00000473782 GPC3P51654 580 aa18.39■□□□□ 0.53
HPS4-210ENST00000473782 EFCAB12Q6NXP0 572 aa18.39■□□□□ 0.53
HPS4-210ENST00000473782 ZNF280BQ86YH2 543 aa18.39■□□□□ 0.53
HPS4-210ENST00000473782 LRRC71Q8N4P6 559 aa18.39■□□□□ 0.53
HPS4-210ENST00000473782 PJA1Q8NG27 643 aa18.39■□□□□ 0.53
HPS4-210ENST00000473782 ANHXE9PGG2 379 aa18.38■□□□□ 0.53
HPS4-210ENST00000473782 FAM86B1E9PN63 330 aa18.38■□□□□ 0.53
HPS4-210ENST00000473782 KINO60870 393 aaKnown RBP18.38■□□□□ 0.53
HPS4-210ENST00000473782 OFD1O75665 1012 aa18.38■□□□□ 0.53
HPS4-210ENST00000473782 FAM86B2P0C5J1 330 aa18.38■□□□□ 0.53
HPS4-210ENST00000473782 RXRAP19793 462 aa18.38■□□□□ 0.53
HPS4-210ENST00000473782 GBP2P32456 591 aaPredicted RBP18.38■□□□□ 0.53
HPS4-210ENST00000473782 KIF5BP33176 963 aa18.38■□□□□ 0.53
HPS4-210ENST00000473782 PHKA2P46019 1235 aa18.38■□□□□ 0.53
HPS4-210ENST00000473782 STARD6P59095 220 aa18.38■□□□□ 0.53
HPS4-210ENST00000473782 KIAA0319Q5VV43 1072 aa18.38■□□□□ 0.53
HPS4-210ENST00000473782 TRMT1LQ7Z2T5 733 aaKnown RBP18.38■□□□□ 0.53
HPS4-210ENST00000473782 SMC5Q8IY18 1101 aa18.38■□□□□ 0.53
HPS4-210ENST00000473782 ST13P5Q8NFI4 369 aaPredicted RBP18.38■□□□□ 0.53
HPS4-210ENST00000473782 NCOA7Q8NI08 942 aa18.38■□□□□ 0.53
HPS4-210ENST00000473782 ZNF707Q96C28 371 aaPredicted RBP18.38■□□□□ 0.53
HPS4-210ENST00000473782 TRAIPQ9BWF2 469 aa18.38■□□□□ 0.53
HPS4-210ENST00000473782 SLC2A4RGQ9NR83 387 aa18.38■□□□□ 0.53
HPS4-210ENST00000473782 AKT3Q9Y243 479 aa18.38■□□□□ 0.53
HPS4-210ENST00000473782 U3KPZ7 1027 aaPredicted RBP18.38■□□□□ 0.53
HPS4-210ENST00000473782 IGLV3-22A0A075B6J6 115 aa18.37■□□□□ 0.53
HPS4-210ENST00000473782 CCDC195A0A1B0GUA6 201 aa18.37■□□□□ 0.53
HPS4-210ENST00000473782 ADRB1P08588 477 aa18.37■□□□□ 0.53
HPS4-210ENST00000473782 AFF1P51825 1210 aaKnown RBP18.37■□□□□ 0.53
HPS4-210ENST00000473782 SART3Q15020 963 aaKnown RBP18.37■□□□□ 0.53
HPS4-210ENST00000473782 ZNF528Q3MIS6 628 aa18.37■□□□□ 0.53
HPS4-210ENST00000473782 LONRF3Q496Y0 759 aa18.37■□□□□ 0.53
HPS4-210ENST00000473782 MIS18BP1Q6P0N0 1132 aa18.37■□□□□ 0.53
HPS4-210ENST00000473782 DCLRE1AQ6PJP8 1040 aa18.37■□□□□ 0.53
HPS4-210ENST00000473782 NXPE3Q969Y0 559 aa18.37■□□□□ 0.53
HPS4-210ENST00000473782 RPP25Q9BUL9 199 aaKnown RBP18.37■□□□□ 0.53
HPS4-210ENST00000473782 ANO3Q9BYT9 981 aa18.37■□□□□ 0.53
HPS4-210ENST00000473782 MAN1C1Q9NR34 630 aa18.37■□□□□ 0.53
HPS4-210ENST00000473782 CLUHO75153 1309 aa18.37■□□□□ 0.53
HPS4-210ENST00000473782 MAGEB2O15479 319 aa18.36■□□□□ 0.53
HPS4-210ENST00000473782 RFPL2O75678 378 aa18.36■□□□□ 0.53
HPS4-210ENST00000473782 DDHD2O94830 711 aa18.36■□□□□ 0.53
HPS4-210ENST00000473782 SSBP05455 408 aaKnown RBP eCLIP18.36■□□□□ 0.53
HPS4-210ENST00000473782 RFX1P22670 979 aa18.36■□□□□ 0.53
HPS4-210ENST00000473782 SREBF1P36956 1147 aa18.36■□□□□ 0.53
HPS4-210ENST00000473782 GNAQP50148 359 aa18.36■□□□□ 0.53
HPS4-210ENST00000473782 HTR4Q13639 388 aa18.36■□□□□ 0.53
HPS4-210ENST00000473782 NOMO2Q5JPE7 1267 aa18.36■□□□□ 0.53
HPS4-210ENST00000473782 WWC2Q6AWC2 1192 aa18.36■□□□□ 0.53
HPS4-210ENST00000473782 B4GALNT3Q6L9W6 998 aa18.36■□□□□ 0.53
HPS4-210ENST00000473782 NIPA1Q7RTP0 329 aa18.36■□□□□ 0.53
HPS4-210ENST00000473782 TAS1R1Q7RTX1 841 aa18.36■□□□□ 0.53
HPS4-210ENST00000473782 RALYLQ86SE5 291 aaKnown RBP18.36■□□□□ 0.53
HPS4-210ENST00000473782 CCDC82Q8N4S0 544 aa18.36■□□□□ 0.53
HPS4-210ENST00000473782 CRYGNQ8WXF5 182 aa18.36■□□□□ 0.53
HPS4-210ENST00000473782 NELL1Q92832 810 aa18.36■□□□□ 0.53
HPS4-210ENST00000473782 DDX23Q9BUQ8 820 aaKnown RBP18.36■□□□□ 0.53
HPS4-210ENST00000473782 EMILIN2Q9BXX0 1053 aa18.36■□□□□ 0.53
HPS4-210ENST00000473782 RIC8AQ9NPQ8 531 aa18.36■□□□□ 0.53
HPS4-210ENST00000473782 RALYQ9UKM9 306 aaKnown RBP18.36■□□□□ 0.53
HPS4-210ENST00000473782 MTF2Q9Y483 593 aaPredicted RBP18.36■□□□□ 0.53
HPS4-210ENST00000473782 ZNF862O60290 1169 aa18.35■□□□□ 0.53
HPS4-210ENST00000473782 EFEMP2O95967 443 aa18.35■□□□□ 0.53
HPS4-210ENST00000473782 MYBP10242 640 aa18.35■□□□□ 0.53
HPS4-210ENST00000473782 LAMP2P13473 410 aa18.35■□□□□ 0.53
HPS4-210ENST00000473782 SDHBP21912 280 aa18.35■□□□□ 0.53
HPS4-210ENST00000473782 CLK2P49760 499 aaKnown RBP18.35■□□□□ 0.53
HPS4-210ENST00000473782 DRP2Q13474 957 aa18.35■□□□□ 0.53
HPS4-210ENST00000473782 NONOQ15233 471 aaKnown RBP eCLIP18.35■□□□□ 0.53
HPS4-210ENST00000473782 HEATR3Q7Z4Q2 680 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms