RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 CREB3L3Q68CJ9 461 aa5.6□□□□□ -1.51
TMEM39A-206ENST00000473684 CCDC70Q6NSX1 233 aa5.6□□□□□ -1.51
TMEM39A-206ENST00000473684 CCNI2Q6ZMN8 369 aaPredicted RBP5.6□□□□□ -1.51
TMEM39A-206ENST00000473684 CEP128Q6ZU80 1094 aa5.6□□□□□ -1.51
TMEM39A-206ENST00000473684 DZIP1Q86YF9 867 aaKnown RBP5.6□□□□□ -1.51
TMEM39A-206ENST00000473684 WFDC8Q8IUA0 241 aa5.6□□□□□ -1.51
TMEM39A-206ENST00000473684 SLC15A3Q8IY34 581 aa5.6□□□□□ -1.51
TMEM39A-206ENST00000473684 C16orf71Q8IYS4 520 aaPredicted RBP5.6□□□□□ -1.51
TMEM39A-206ENST00000473684 CACNA2D3Q8IZS8 1091 aa5.6□□□□□ -1.51
TMEM39A-206ENST00000473684 NOA1Q8NC60 698 aaKnown RBP5.6□□□□□ -1.51
TMEM39A-206ENST00000473684 AENQ8WTP8 325 aaKnown RBP5.6□□□□□ -1.51
TMEM39A-206ENST00000473684 NAA15Q9BXJ9 866 aaKnown RBP5.6□□□□□ -1.51
TMEM39A-206ENST00000473684 BHMT2Q9H2M3 363 aa5.6□□□□□ -1.51
TMEM39A-206ENST00000473684 PRDM6Q9NQX0 595 aa5.6□□□□□ -1.51
TMEM39A-206ENST00000473684 PCDHA4Q9UN74 947 aa5.6□□□□□ -1.51
TMEM39A-206ENST00000473684 ADCY9O60503 1353 aa5.6□□□□□ -1.51
TMEM39A-206ENST00000473684 TUBGCP6Q96RT7 1819 aa5.6□□□□□ -1.51
TMEM39A-206ENST00000473684 C5orf60A6NFR6 353 aa5.6□□□□□ -1.51
TMEM39A-206ENST00000473684 HSF2BPO75031 334 aa5.6□□□□□ -1.51
TMEM39A-206ENST00000473684 CTSBP07858 339 aa5.6□□□□□ -1.51
TMEM39A-206ENST00000473684 MMEP08473 750 aa5.6□□□□□ -1.51
TMEM39A-206ENST00000473684 KCNA6P17658 529 aa5.6□□□□□ -1.51
TMEM39A-206ENST00000473684 HOXD12P35452 270 aa5.6□□□□□ -1.51
TMEM39A-206ENST00000473684 CCT6AP40227 531 aaKnown RBP5.6□□□□□ -1.51
TMEM39A-206ENST00000473684 MDH1P40925 334 aaKnown RBP5.6□□□□□ -1.51
TMEM39A-206ENST00000473684 STAT6P42226 847 aa5.6□□□□□ -1.51
TMEM39A-206ENST00000473684 CKAP4Q07065 602 aaKnown RBP5.6□□□□□ -1.51
TMEM39A-206ENST00000473684 TBX2Q13207 712 aaPredicted RBP5.6□□□□□ -1.51
TMEM39A-206ENST00000473684 TOGARAM2Q6ZUX3 1019 aa5.6□□□□□ -1.51
TMEM39A-206ENST00000473684 LRP10Q7Z4F1 713 aa5.6□□□□□ -1.51
TMEM39A-206ENST00000473684 HOOK3Q86VS8 718 aa5.6□□□□□ -1.51
TMEM39A-206ENST00000473684 CCDC83Q8IWF9 413 aa5.6□□□□□ -1.51
TMEM39A-206ENST00000473684 AGAP11Q8TF27 550 aa5.6□□□□□ -1.51
TMEM39A-206ENST00000473684 EDARADDQ8WWZ3 215 aa5.6□□□□□ -1.51
TMEM39A-206ENST00000473684 ATRIPQ8WXE1 791 aa5.6□□□□□ -1.51
TMEM39A-206ENST00000473684 MAML3Q96JK9 1138 aa5.6□□□□□ -1.51
TMEM39A-206ENST00000473684 SRPK1Q96SB4 655 aaKnown RBP5.6□□□□□ -1.51
TMEM39A-206ENST00000473684 PIDD1Q9HB75 910 aa5.6□□□□□ -1.51
TMEM39A-206ENST00000473684 EXOC1Q9NV70 894 aa5.6□□□□□ -1.51
TMEM39A-206ENST00000473684 SNTG2Q9NY99 539 aa5.6□□□□□ -1.51
TMEM39A-206ENST00000473684 MSRB2Q9Y3D2 182 aa5.6□□□□□ -1.51
TMEM39A-206ENST00000473684 EIF3FO00303 357 aaPredicted RBP5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 ZNF862O60290 1169 aa5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 ADAMTS2O95450 1211 aa5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 ATP2A2P16615 1042 aaKnown RBP5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 CA8P35219 290 aa5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 PDE1AP54750 535 aa5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 UBASH3AP57075 661 aa5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 BPIFB4P59827 614 aa5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 ATL3Q6DD88 541 aa5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 IQCEQ6IPM2 695 aa5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 NANOGNBQ7Z5D8 188 aa5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 CELF2-AS1Q8N7Q2 184 aa5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 GALNT6Q8NCL4 622 aa5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 OTUD7AQ8TE49 926 aaPredicted RBP5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 CCT6BQ92526 530 aa5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 NCSTNQ92542 709 aa5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 KLHDC7BQ96G42 594 aa5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 SH3GL1Q99961 368 aa5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 FAM167BQ9BTA0 163 aa5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 API5Q9BZZ5 524 aaKnown RBP5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 IRF2BPLQ9H1B7 796 aa5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 LRRC42Q9Y546 428 aa5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 TMEM247A6NEH6 219 aa5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 E7EVH7 732 aa5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 TERTO14746 1132 aaKnown RBP5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 WDR46O15213 610 aaKnown RBP5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 NUP155O75694 1391 aa5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 WFS1O76024 890 aa5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 EIF2S2P20042 333 aaKnown RBP5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 CDC25CP30307 473 aa5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 MLH1P40692 756 aa5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 CASP7P55210 303 aa5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 ARPC4P59998 168 aa5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 KLC1Q07866 573 aa5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 NSUN2Q08J23 767 aaKnown RBP eCLIP5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 SAFB2Q14151 953 aaKnown RBP eCLIP5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 INPP5AQ14642 412 aa5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 KARSQ15046 597 aaKnown RBP5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 RCN1Q15293 331 aa5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 INAQ16352 499 aa5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 TTMPQ5BVD1 217 aa5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 ANO7Q6IWH7 933 aa5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 NAA16Q6N069 864 aaPredicted RBP5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 EMBQ6PCB8 327 aa5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 LRFN4Q6PJG9 635 aa5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 PACS1Q6VY07 963 aa5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 CACNA2D4Q7Z3S7 1137 aa5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 ZNF554Q86TJ5 538 aa5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 LRRC49Q8IUZ0 686 aa5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 NACC2Q96BF6 587 aa5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 DHTKD1Q96HY7 919 aaPredicted RBP5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 BTBD6Q96KE9 485 aa5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 ZMAT2Q96NC0 199 aaKnown RBP5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 DEPDC7Q96QD5 511 aa5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 PANX2Q96RD6 677 aa5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 HYPKQ9NX55 129 aa5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 UBAP1Q9NZ09 502 aa5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 ACTR10Q9NZ32 417 aa5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 CEP131Q9UPN4 1083 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms