RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 DMAC2Q9NW81 257 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 ZNHIT6Q9NWK9 470 aaKnown RBP6.82□□□□□ -1.32
CLK1-210ENST00000473565 HSPBP1Q9NZL4 362 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 GCNT4Q9P109 453 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 PNMA3Q9UL41 463 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 MAFBQ9Y5Q3 323 aaPredicted RBP6.82□□□□□ -1.32
CLK1-210ENST00000473565 DUSP10Q9Y6W6 482 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 PLXNA1Q9UIW2 1896 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 A0A1W2PQJ5 194 aa6.81□□□□□ -1.32
CLK1-210ENST00000473565 SLC16A3O15427 465 aaKnown RBP6.81□□□□□ -1.32
CLK1-210ENST00000473565 CCP110O43303 1012 aa6.81□□□□□ -1.32
CLK1-210ENST00000473565 ATG7O95352 703 aa6.81□□□□□ -1.32
CLK1-210ENST00000473565 ADRB2P07550 413 aa6.81□□□□□ -1.32
CLK1-210ENST00000473565 TXNP10599 105 aaKnown RBP6.81□□□□□ -1.32
CLK1-210ENST00000473565 PON1P27169 355 aa6.81□□□□□ -1.32
CLK1-210ENST00000473565 ADSSP30520 456 aa6.81□□□□□ -1.32
CLK1-210ENST00000473565 STAT5BP51692 787 aa6.81□□□□□ -1.32
CLK1-210ENST00000473565 NCKAP1LP55160 1127 aa6.81□□□□□ -1.32
CLK1-210ENST00000473565 RBM10P98175 930 aaKnown RBP6.81□□□□□ -1.32
CLK1-210ENST00000473565 GTF2BQ00403 316 aa6.81□□□□□ -1.32
CLK1-210ENST00000473565 ARHGAP29Q52LW3 1261 aa6.81□□□□□ -1.32
CLK1-210ENST00000473565 FIGNQ5HY92 759 aa6.81□□□□□ -1.32
CLK1-210ENST00000473565 DPY19L2P1Q6NXN4 242 aa6.81□□□□□ -1.32
CLK1-210ENST00000473565 SLC39A4Q6P5W5 647 aa6.81□□□□□ -1.32
CLK1-210ENST00000473565 ARMCX2Q7L311 632 aa6.81□□□□□ -1.32
CLK1-210ENST00000473565 TAS1R3Q7RTX0 852 aa6.81□□□□□ -1.32
CLK1-210ENST00000473565 CBWD2Q8IUF1 395 aa6.81□□□□□ -1.32
CLK1-210ENST00000473565 ATP6V0A4Q9HBG4 840 aa6.81□□□□□ -1.32
CLK1-210ENST00000473565 PDLIM7Q9NR12 457 aa6.81□□□□□ -1.32
CLK1-210ENST00000473565 CPA4Q9UI42 421 aa6.81□□□□□ -1.32
CLK1-210ENST00000473565 FAM184BQ9ULE4 1060 aa6.81□□□□□ -1.32
CLK1-210ENST00000473565 TBX20Q9UMR3 447 aa6.81□□□□□ -1.32
CLK1-210ENST00000473565 GUCA1BQ9UMX6 200 aa6.81□□□□□ -1.32
CLK1-210ENST00000473565 HTTP42858 3142 aa6.81□□□□□ -1.32
CLK1-210ENST00000473565 UBE4BO95155 1302 aa6.81□□□□□ -1.32
CLK1-210ENST00000473565 NOP56O00567 594 aaKnown RBP6.81□□□□□ -1.32
CLK1-210ENST00000473565 DGAT1O75907 488 aa6.81□□□□□ -1.32
CLK1-210ENST00000473565 URI1O94763 535 aaPredicted RBP6.81□□□□□ -1.32
CLK1-210ENST00000473565 EDN1P05305 212 aa6.81□□□□□ -1.32
CLK1-210ENST00000473565 GJB1P08034 283 aa6.81□□□□□ -1.32
CLK1-210ENST00000473565 NEDD9Q14511 834 aa6.81□□□□□ -1.32
CLK1-210ENST00000473565 EXOC3L4Q17RC7 722 aa6.81□□□□□ -1.32
CLK1-210ENST00000473565 TDRD12Q587J7 1177 aaKnown RBP6.81□□□□□ -1.32
CLK1-210ENST00000473565 ZNF569Q5MCW4 686 aa6.81□□□□□ -1.32
CLK1-210ENST00000473565 METTL7BQ6UX53 244 aa6.81□□□□□ -1.32
CLK1-210ENST00000473565 LRRC71Q8N4P6 559 aa6.81□□□□□ -1.32
CLK1-210ENST00000473565 CCDC127Q96BQ5 260 aa6.81□□□□□ -1.32
CLK1-210ENST00000473565 SPATA33Q96N06 139 aa6.81□□□□□ -1.32
CLK1-210ENST00000473565 POP1Q99575 1024 aaKnown RBP6.81□□□□□ -1.32
CLK1-210ENST00000473565 GPR20Q99678 358 aa6.81□□□□□ -1.32
CLK1-210ENST00000473565 TOPORSQ9NS56 1045 aaPredicted RBP6.81□□□□□ -1.32
CLK1-210ENST00000473565 ZNF215Q9UL58 517 aaPredicted RBP6.81□□□□□ -1.32
CLK1-210ENST00000473565 PLAGL2Q9UPG8 496 aa6.81□□□□□ -1.32
CLK1-210ENST00000473565 FRMD4BQ9Y2L6 1034 aa6.81□□□□□ -1.32
CLK1-210ENST00000473565 IGKV6D-21A0A0A0MT36 114 aa6.8□□□□□ -1.32
CLK1-210ENST00000473565 LRRIQ4A6NIV6 560 aa6.8□□□□□ -1.32
CLK1-210ENST00000473565 ITGBL1O95965 494 aaPredicted RBP6.8□□□□□ -1.32
CLK1-210ENST00000473565 CNGA1P29973 690 aa6.8□□□□□ -1.32
CLK1-210ENST00000473565 GCLMP48507 274 aa6.8□□□□□ -1.32
CLK1-210ENST00000473565 GFPT1Q06210 699 aaPredicted RBP6.8□□□□□ -1.32
CLK1-210ENST00000473565 GRM1Q13255 1194 aa6.8□□□□□ -1.32
CLK1-210ENST00000473565 HGSNATQ68CP4 663 aa6.8□□□□□ -1.32
CLK1-210ENST00000473565 DHX37Q8IY37 1157 aaKnown RBP6.8□□□□□ -1.32
CLK1-210ENST00000473565 SLC35F6Q8N357 371 aa6.8□□□□□ -1.32
CLK1-210ENST00000473565 SEPT1Q8WYJ6 367 aa6.8□□□□□ -1.32
CLK1-210ENST00000473565 CCDC42Q96M95 316 aa6.8□□□□□ -1.32
CLK1-210ENST00000473565 SUGCTQ9HAC7 445 aa6.8□□□□□ -1.32
CLK1-210ENST00000473565 METTL14Q9HCE5 456 aaKnown RBP6.8□□□□□ -1.32
CLK1-210ENST00000473565 SIX2Q9NPC8 291 aa6.8□□□□□ -1.32
CLK1-210ENST00000473565 CEP72Q9P209 647 aa6.8□□□□□ -1.32
CLK1-210ENST00000473565 PAXBP1Q9Y5B6 917 aa6.8□□□□□ -1.32
CLK1-210ENST00000473565 EVPLQ92817 2033 aa6.8□□□□□ -1.32
CLK1-210ENST00000473565 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.8□□□□□ -1.32
CLK1-210ENST00000473565 IGF2BP3O00425 579 aaKnown RBP eCLIP6.8□□□□□ -1.32
CLK1-210ENST00000473565 HNRNPDLO14979 420 aaKnown RBP6.8□□□□□ -1.32
CLK1-210ENST00000473565 AKR1B10O60218 316 aa6.8□□□□□ -1.32
CLK1-210ENST00000473565 MAPTP10636 758 aaKnown RBP6.8□□□□□ -1.32
CLK1-210ENST00000473565 UCHL3P15374 230 aa6.8□□□□□ -1.32
CLK1-210ENST00000473565 GLRA2P23416 452 aa6.8□□□□□ -1.32
CLK1-210ENST00000473565 ADCYAP1R1P41586 468 aa6.8□□□□□ -1.32
CLK1-210ENST00000473565 FMO5P49326 533 aa6.8□□□□□ -1.32
CLK1-210ENST00000473565 KIF11P52732 1056 aa6.8□□□□□ -1.32
CLK1-210ENST00000473565 SMTNP53814 917 aa6.8□□□□□ -1.32
CLK1-210ENST00000473565 PPP3CAQ08209 521 aa6.8□□□□□ -1.32
CLK1-210ENST00000473565 BFSP1Q12934 665 aa6.8□□□□□ -1.32
CLK1-210ENST00000473565 CELF3Q5SZQ8 465 aaKnown RBP6.8□□□□□ -1.32
CLK1-210ENST00000473565 C1orf220Q5T0J3 134 aa6.8□□□□□ -1.32
CLK1-210ENST00000473565 KLHDC7AQ5VTJ3 777 aa6.8□□□□□ -1.32
CLK1-210ENST00000473565 CCDC62Q6P9F0 684 aa6.8□□□□□ -1.32
CLK1-210ENST00000473565 KIAA1328Q86T90 577 aa6.8□□□□□ -1.32
CLK1-210ENST00000473565 KIFAP3Q92845 792 aa6.8□□□□□ -1.32
CLK1-210ENST00000473565 BICD1Q96G01 975 aa6.8□□□□□ -1.32
CLK1-210ENST00000473565 ZBTB45Q96K62 511 aaPredicted RBP6.8□□□□□ -1.32
CLK1-210ENST00000473565 CEP89Q96ST8 783 aa6.8□□□□□ -1.32
CLK1-210ENST00000473565 DEF6Q9H4E7 631 aa6.8□□□□□ -1.32
CLK1-210ENST00000473565 TMEM206Q9H813 350 aa6.8□□□□□ -1.32
CLK1-210ENST00000473565 EMSYQ7Z589 1322 aa6.8□□□□□ -1.32
CLK1-210ENST00000473565 MACROD2A1Z1Q3 448 aa6.8□□□□□ -1.32
CLK1-210ENST00000473565 TTLL13PA6NNM8 815 aa6.8□□□□□ -1.32
CLK1-210ENST00000473565 DKC1O60832 514 aaKnown RBP eCLIP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms