RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 ITGB1P05556 798 aa20.16■□□□□ 0.82
SNX4-204ENST00000473417 IBSPP21815 317 aaPredicted RBP20.16■□□□□ 0.82
SNX4-204ENST00000473417 FAM189BP81408 668 aa20.16■□□□□ 0.82
SNX4-204ENST00000473417 RESTQ13127 1097 aa20.16■□□□□ 0.82
SNX4-204ENST00000473417 DRP2Q13474 957 aa20.16■□□□□ 0.82
SNX4-204ENST00000473417 CAMK1Q14012 370 aa20.16■□□□□ 0.82
SNX4-204ENST00000473417 TPH2Q8IWU9 490 aa20.16■□□□□ 0.82
SNX4-204ENST00000473417 SH2D3AQ9BRG2 576 aa20.16■□□□□ 0.82
SNX4-204ENST00000473417 LXNQ9BS40 222 aa20.16■□□□□ 0.82
SNX4-204ENST00000473417 C1QTNF1Q9BXJ1 281 aa20.16■□□□□ 0.82
SNX4-204ENST00000473417 ELAC1Q9H777 363 aaKnown RBP20.16■□□□□ 0.82
SNX4-204ENST00000473417 IGKV6-21A0A0C4DH24 114 aa20.15■□□□□ 0.82
SNX4-204ENST00000473417 DKC1O60832 514 aaKnown RBP eCLIP20.15■□□□□ 0.82
SNX4-204ENST00000473417 SLITRK3O94933 977 aa20.15■□□□□ 0.82
SNX4-204ENST00000473417 DARSP14868 501 aaKnown RBP20.15■□□□□ 0.82
SNX4-204ENST00000473417 DNAJB1P25685 340 aa20.15■□□□□ 0.82
SNX4-204ENST00000473417 CTC1Q2NKJ3 1217 aa20.15■□□□□ 0.82
SNX4-204ENST00000473417 FAM102BQ5T8I3 360 aa20.15■□□□□ 0.82
SNX4-204ENST00000473417 FAM173BQ6P4H8 233 aa20.15■□□□□ 0.82
SNX4-204ENST00000473417 ANO5Q75V66 913 aa20.15■□□□□ 0.82
SNX4-204ENST00000473417 KLHL23Q8NBE8 558 aa20.15■□□□□ 0.82
SNX4-204ENST00000473417 SPPL3Q8TCT6 385 aa20.15■□□□□ 0.82
SNX4-204ENST00000473417 ZNF668Q96K58 619 aaPredicted RBP20.15■□□□□ 0.82
SNX4-204ENST00000473417 HSD17B14Q9BPX1 270 aa20.15■□□□□ 0.82
SNX4-204ENST00000473417 TBKBP1A7MCY6 615 aa20.14■□□□□ 0.81
SNX4-204ENST00000473417 H3BQ06 376 aaPredicted RBP20.14■□□□□ 0.81
SNX4-204ENST00000473417 LAD1O00515 517 aa20.14■□□□□ 0.81
SNX4-204ENST00000473417 NCK2O43639 380 aa20.14■□□□□ 0.81
SNX4-204ENST00000473417 IL9P15248 144 aa20.14■□□□□ 0.81
SNX4-204ENST00000473417 HYAL1Q12794 435 aa20.14■□□□□ 0.81
SNX4-204ENST00000473417 FOXD4L5Q5VV16 416 aaPredicted RBP20.14■□□□□ 0.81
SNX4-204ENST00000473417 PLA2G4FQ68DD2 849 aa20.14■□□□□ 0.81
SNX4-204ENST00000473417 PTCRAQ6ISU1 281 aaPredicted RBP20.14■□□□□ 0.81
SNX4-204ENST00000473417 C4orf19Q8IY42 314 aa20.14■□□□□ 0.81
SNX4-204ENST00000473417 NLRP7Q8WX94 980 aa20.14■□□□□ 0.81
SNX4-204ENST00000473417 FOXD4L4Q8WXT5 416 aaPredicted RBP20.14■□□□□ 0.81
SNX4-204ENST00000473417 ZSWIM4Q9H7M6 989 aa20.14■□□□□ 0.81
SNX4-204ENST00000473417 ATP6V0A4Q9HBG4 840 aa20.14■□□□□ 0.81
SNX4-204ENST00000473417 CLDND1Q9NY35 253 aa20.14■□□□□ 0.81
SNX4-204ENST00000473417 GRXCR2A6NFK2 248 aa20.13■□□□□ 0.81
SNX4-204ENST00000473417 MAFO75444 373 aaPredicted RBP20.13■□□□□ 0.81
SNX4-204ENST00000473417 FGFR1P11362 822 aa20.13■□□□□ 0.81
SNX4-204ENST00000473417 LTBRP36941 435 aa20.13■□□□□ 0.81
SNX4-204ENST00000473417 FXR2P51116 673 aaKnown RBP eCLIP20.13■□□□□ 0.81
SNX4-204ENST00000473417 ATP2C1P98194 919 aaPredicted RBP20.13■□□□□ 0.81
SNX4-204ENST00000473417 BECN1Q14457 450 aa20.13■□□□□ 0.81
SNX4-204ENST00000473417 IL17AQ16552 155 aa20.13■□□□□ 0.81
SNX4-204ENST00000473417 PUS10Q3MIT2 529 aaKnown RBP20.13■□□□□ 0.81
SNX4-204ENST00000473417 FAM178BQ8IXR5 827 aa20.13■□□□□ 0.81
SNX4-204ENST00000473417 SCLT1Q96NL6 688 aa20.13■□□□□ 0.81
SNX4-204ENST00000473417 HCSTQ9UBK5 93 aa20.13■□□□□ 0.81
SNX4-204ENST00000473417 ZBTB39O15060 712 aa20.12■□□□□ 0.81
SNX4-204ENST00000473417 CSPG5O95196 566 aa20.12■□□□□ 0.81
SNX4-204ENST00000473417 ZSCAN20P17040 1043 aaPredicted RBP20.12■□□□□ 0.81
SNX4-204ENST00000473417 YWHABP31946 246 aaKnown RBP20.12■□□□□ 0.81
SNX4-204ENST00000473417 PRPHP41219 470 aa20.12■□□□□ 0.81
SNX4-204ENST00000473417 NPEPPSP55786 919 aa20.12■□□□□ 0.81
SNX4-204ENST00000473417 CDC42EP1Q00587 391 aa20.12■□□□□ 0.81
SNX4-204ENST00000473417 SF3A1Q15459 793 aaKnown RBP20.12■□□□□ 0.81
SNX4-204ENST00000473417 DTHD1Q6ZMT9 781 aa20.12■□□□□ 0.81
SNX4-204ENST00000473417 ERMNQ8TAM6 284 aa20.12■□□□□ 0.81
SNX4-204ENST00000473417 POF1BQ8WVV4 589 aa20.12■□□□□ 0.81
SNX4-204ENST00000473417 ZSCAN16Q9H4T2 348 aaPredicted RBP20.12■□□□□ 0.81
SNX4-204ENST00000473417 CWH43Q9H720 699 aa20.12■□□□□ 0.81
SNX4-204ENST00000473417 AAASQ9NRG9 546 aa20.12■□□□□ 0.81
SNX4-204ENST00000473417 RNF19AQ9NV58 838 aa20.12■□□□□ 0.81
SNX4-204ENST00000473417 LRWD1Q9UFC0 647 aa20.12■□□□□ 0.81
SNX4-204ENST00000473417 PCDHB12Q9Y5F1 795 aa20.12■□□□□ 0.81
SNX4-204ENST00000473417 A0A087WWV3 80 aa20.11■□□□□ 0.81
SNX4-204ENST00000473417 HOXA2O43364 376 aa20.11■□□□□ 0.81
SNX4-204ENST00000473417 MED24O75448 989 aa20.11■□□□□ 0.81
SNX4-204ENST00000473417 SPATA31C1P0DKV0 1188 aa20.11■□□□□ 0.81
SNX4-204ENST00000473417 FGFR4P22455 802 aa20.11■□□□□ 0.81
SNX4-204ENST00000473417 GTF2F1P35269 517 aaKnown RBP eCLIP20.11■□□□□ 0.81
SNX4-204ENST00000473417 IRS1P35568 1242 aa20.11■□□□□ 0.81
SNX4-204ENST00000473417 DNM2P50570 870 aa20.11■□□□□ 0.81
SNX4-204ENST00000473417 SPOUT1Q5T280 376 aaKnown RBP20.11■□□□□ 0.81
SNX4-204ENST00000473417 EP400NLQ6ZTU2 488 aa20.11■□□□□ 0.81
SNX4-204ENST00000473417 ZNF410Q86VK4 478 aa20.11■□□□□ 0.81
SNX4-204ENST00000473417 CATSPER3Q86XQ3 398 aa20.11■□□□□ 0.81
SNX4-204ENST00000473417 ECHDC2Q86YB7 292 aa20.11■□□□□ 0.81
SNX4-204ENST00000473417 ZNF579Q8NAF0 562 aaKnown RBP20.11■□□□□ 0.81
SNX4-204ENST00000473417 COLGALT1Q8NBJ5 622 aa20.11■□□□□ 0.81
SNX4-204ENST00000473417 CEP170P1Q96L14 293 aa20.11■□□□□ 0.81
SNX4-204ENST00000473417 GCOM2Q9BZD3 368 aaPredicted RBP20.11■□□□□ 0.81
SNX4-204ENST00000473417 TMEM117Q9H0C3 514 aa20.11■□□□□ 0.81
SNX4-204ENST00000473417 CD320Q9NPF0 282 aa20.11■□□□□ 0.81
SNX4-204ENST00000473417 CYP26B1Q9NR63 512 aa20.11■□□□□ 0.81
SNX4-204ENST00000473417 TYW1Q9NV66 732 aaKnown RBP20.11■□□□□ 0.81
SNX4-204ENST00000473417 A0A087WZ62 844 aa20.1■□□□□ 0.81
SNX4-204ENST00000473417 TBX10O75333 385 aa20.1■□□□□ 0.81
SNX4-204ENST00000473417 UBE3AQ05086 875 aa20.1■□□□□ 0.81
SNX4-204ENST00000473417 PKP1Q13835 747 aa20.1■□□□□ 0.81
SNX4-204ENST00000473417 PDIA5Q14554 519 aa20.1■□□□□ 0.81
SNX4-204ENST00000473417 CSPP1Q1MSJ5 1256 aa20.1■□□□□ 0.81
SNX4-204ENST00000473417 XKR9Q5GH70 373 aa20.1■□□□□ 0.81
SNX4-204ENST00000473417 OTUD6AQ7L8S5 288 aa20.1■□□□□ 0.81
SNX4-204ENST00000473417 ADGRD2Q7Z7M1 963 aa20.1■□□□□ 0.81
SNX4-204ENST00000473417 PPP2R3CQ969Q6 453 aa20.1■□□□□ 0.81
SNX4-204ENST00000473417 CASD1Q96PB1 797 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms