RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 FAM47CQ5HY64 1035 aa3.18□□□□□ -1.9
XRN1-210ENST00000472697 MAEAQ7L5Y9 396 aa3.18□□□□□ -1.9
XRN1-210ENST00000472697 USHBP1Q8N6Y0 703 aa3.18□□□□□ -1.9
XRN1-210ENST00000472697 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.18□□□□□ -1.9
XRN1-210ENST00000472697 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.18□□□□□ -1.91e-11■■□□□ 14.1
XRN1-210ENST00000472697 KLHDC4Q8TBB5 520 aa3.18□□□□□ -1.9
XRN1-210ENST00000472697 IPO4Q8TEX9 1081 aaKnown RBP3.18□□□□□ -1.9
XRN1-210ENST00000472697 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.18□□□□□ -1.9
XRN1-210ENST00000472697 STYXQ8WUJ0 223 aa3.18□□□□□ -1.9
XRN1-210ENST00000472697 CLEC4DQ8WXI8 215 aa3.18□□□□□ -1.9
XRN1-210ENST00000472697 FOXRED1Q96CU9 486 aaPredicted RBP3.18□□□□□ -1.9
XRN1-210ENST00000472697 TRERF1Q96PN7 1200 aa3.18□□□□□ -1.9
XRN1-210ENST00000472697 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.18□□□□□ -1.99e-7■■□□□ 14
XRN1-210ENST00000472697 DUSP15Q9H1R2 295 aaPredicted RBP3.18□□□□□ -1.9
XRN1-210ENST00000472697 POLG2Q9UHN1 485 aa3.18□□□□□ -1.9
XRN1-210ENST00000472697 HCFC2Q9Y5Z7 792 aa3.18□□□□□ -1.9
XRN1-210ENST00000472697 SLC12A8A0AV02 714 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 TSPY2A6NKD2 308 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 TMEM233B4DJY2 109 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 SLC27A2O14975 620 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 MSL3P1P0C860 447 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 TSPY3P0CV98 308 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 TSPY8P0CW00 308 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 HNRNPLP14866 589 aaKnown RBP eCLIP3.17□□□□□ -1.9
XRN1-210ENST00000472697 AOAHP28039 575 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 MAPK4P31152 587 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 HSPA7P48741 367 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 SNRPNP63162 240 aaKnown RBP3.17□□□□□ -1.9
XRN1-210ENST00000472697 TSPY1Q01534 308 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 CRY1Q16526 586 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 PCSK7Q16549 785 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 MPEG1Q2M385 716 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 SPECC1Q5M775 1068 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 HYIQ5T013 277 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 L1TD1Q5T7N2 865 aaKnown RBP3.17□□□□□ -1.9
XRN1-210ENST00000472697 DARS2Q6PI48 645 aaKnown RBP3.17□□□□□ -1.9
XRN1-210ENST00000472697 OR8H2Q8N162 312 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 MARCH10Q8NA82 808 aaPredicted RBP3.17□□□□□ -1.9
XRN1-210ENST00000472697 ARRDC4Q8NCT1 418 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 MAML1Q92585 1016 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 SLC35A4Q96G79 324 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 P2RX7Q99572 595 aaKnown RBP3.17□□□□□ -1.9
XRN1-210ENST00000472697 CHCHD6Q9BRQ6 235 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 TTLL2Q9BWV7 592 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 BCAS3Q9H6U6 928 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 MBIPQ9NS73 344 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 UCKL1Q9NWZ5 548 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 IGSF9Q9P2J2 1179 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 TCFL5Q9UL49 500 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 TPCN1Q9ULQ1 816 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 PCDHA3Q9Y5H8 950 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 MAGED1Q9Y5V3 778 aaPredicted RBP3.17□□□□□ -1.9
XRN1-210ENST00000472697 B3GALT1Q9Y5Z6 326 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 BCORL1Q5H9F3 1711 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 RPGRIP1LQ68CZ1 1315 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 SOGA1O94964 1423 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 FAM47E-STBD1D6RA91 191 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 ACOT7O00154 380 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 GOLIM4O00461 696 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 ADCY6O43306 1168 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 AHSGP02765 367 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 FTLP02792 175 aaPredicted RBP3.17□□□□□ -1.9
XRN1-210ENST00000472697 SYPP08247 313 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 MYF5P13349 255 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 CAP2P40123 477 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 CD96P40200 585 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 ADKP55263 362 aaKnown RBP3.17□□□□□ -1.9
XRN1-210ENST00000472697 LACTBP83111 547 aaPredicted RBP3.17□□□□□ -1.9
XRN1-210ENST00000472697 CREMQ03060 361 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 TNFAIP2Q03169 654 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 VPS53Q5VIR6 699 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 DIEXFQ68CQ4 756 aaKnown RBP3.17□□□□□ -1.9
XRN1-210ENST00000472697 HHIPL2Q6UWX4 724 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 CYP26C1Q6V0L0 522 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 GAREM2Q75VX8 874 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 DAAM2Q86T65 1068 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 PPP1R3BQ86XI6 285 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 CACNA2D3Q8IZS8 1091 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 ANKRD52Q8NB46 1076 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 CSGALNACT1Q8TDX6 532 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 WHAMMQ8TF30 809 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 PHKBQ93100 1093 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 GCC1Q96CN9 775 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 FDXACB1Q9BRP7 624 aaPredicted RBP3.17□□□□□ -1.9
XRN1-210ENST00000472697 ATXN3LQ9H3M9 355 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 GSX1Q9H4S2 264 aaPredicted RBP3.17□□□□□ -1.9
XRN1-210ENST00000472697 MLXIPQ9HAP2 919 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 ARFGAP3Q9NP61 516 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 GPATCH2Q9NW75 528 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 ASAP1Q9ULH1 1129 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 ZNF652Q9Y2D9 606 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 UHRF1BP1LA0JNW5 1464 aa3.17□□□□□ -1.9
XRN1-210ENST00000472697 A0A087WZ62 844 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 CAPN8A6NHC0 703 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 FUCA1P04066 466 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 SDHBP21912 280 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 GRK6P43250 576 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 PRKAA2P54646 552 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 FAM193AP78312 1265 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 KRT85P78386 507 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms