RNA–Protein interactions for RNA: ENST00000472638.1

UBQLN4-203, Transcript of ubiquilin 4, humanhuman

TSL 5

Gene UBQLN4, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-203ENST00000472638 HLA-CQ95604 372 aa22.16■■□□□ 1.14
UBQLN4-203ENST00000472638 ALG13Q9NP73 1137 aaKnown RBP22.16■■□□□ 1.14
UBQLN4-203ENST00000472638 RNF216Q9NWF9 866 aaPredicted RBP22.16■■□□□ 1.14
UBQLN4-203ENST00000472638 HCSTQ9UBK5 93 aa22.16■■□□□ 1.14
UBQLN4-203ENST00000472638 NOL7Q9UMY1 257 aaKnown RBP22.16■■□□□ 1.14
UBQLN4-203ENST00000472638 PPME1Q9Y570 386 aa22.16■■□□□ 1.14
UBQLN4-203ENST00000472638 COL4A3BPQ9Y5P4 624 aa22.16■■□□□ 1.14
UBQLN4-203ENST00000472638 KCNQ1P51787 676 aa22.15■■□□□ 1.14
UBQLN4-203ENST00000472638 ECHDC2Q86YB7 292 aa22.15■■□□□ 1.14
UBQLN4-203ENST00000472638 EXOC8Q8IYI6 725 aa22.15■■□□□ 1.14
UBQLN4-203ENST00000472638 PIGOQ8TEQ8 1089 aa22.15■■□□□ 1.14
UBQLN4-203ENST00000472638 PSPC1Q8WXF1 523 aaKnown RBP22.15■■□□□ 1.14
UBQLN4-203ENST00000472638 SYMPKQ92797 1274 aaKnown RBP22.15■■□□□ 1.14
UBQLN4-203ENST00000472638 CCDC43Q96MW1 224 aaKnown RBP22.15■■□□□ 1.14
UBQLN4-203ENST00000472638 ELAC1Q9H777 363 aaKnown RBP22.15■■□□□ 1.14
UBQLN4-203ENST00000472638 COG5Q9UP83 839 aa22.15■■□□□ 1.14
UBQLN4-203ENST00000472638 NLRC5Q86WI3 1866 aa22.15■■□□□ 1.14
UBQLN4-203ENST00000472638 LYPLA2O95372 231 aa22.14■■□□□ 1.13
UBQLN4-203ENST00000472638 SFPQP23246 707 aaKnown RBP eCLIP22.14■■□□□ 1.13
UBQLN4-203ENST00000472638 LAMTOR4Q0VGL1 99 aa22.14■■□□□ 1.13
UBQLN4-203ENST00000472638 CATSPER4Q7RTX7 472 aa22.14■■□□□ 1.13
UBQLN4-203ENST00000472638 MTRQ99707 1265 aa22.14■■□□□ 1.13
UBQLN4-203ENST00000472638 INO80BQ9C086 356 aaPredicted RBP22.14■■□□□ 1.13
UBQLN4-203ENST00000472638 CIZ1Q9ULV3 898 aaPredicted RBP22.14■■□□□ 1.13
UBQLN4-203ENST00000472638 U2AF2P26368 475 aaKnown RBP eCLIP22.13■■□□□ 1.13
UBQLN4-203ENST00000472638 ORC2Q13416 577 aaPredicted RBP22.13■■□□□ 1.13
UBQLN4-203ENST00000472638 TIGD5Q53EQ6 642 aa22.13■■□□□ 1.13
UBQLN4-203ENST00000472638 TCEAL5Q5H9L2 206 aa22.13■■□□□ 1.13
UBQLN4-203ENST00000472638 MCTP1Q6DN14 999 aa22.13■■□□□ 1.13
UBQLN4-203ENST00000472638 KLHL23Q8NBE8 558 aa22.13■■□□□ 1.13
UBQLN4-203ENST00000472638 TCP11Q8WWU5 503 aa22.13■■□□□ 1.13
UBQLN4-203ENST00000472638 PLVAPQ9BX97 442 aa22.13■■□□□ 1.13
UBQLN4-203ENST00000472638 IFT122Q9HBG6 1241 aa22.13■■□□□ 1.13
UBQLN4-203ENST00000472638 XPNPEP1Q9NQW7 623 aa22.13■■□□□ 1.13
UBQLN4-203ENST00000472638 ANKEF1Q9NU02 776 aa22.13■■□□□ 1.13
UBQLN4-203ENST00000472638 RNF19AQ9NV58 838 aa22.13■■□□□ 1.13
UBQLN4-203ENST00000472638 TYW1Q9NV66 732 aaKnown RBP22.13■■□□□ 1.13
UBQLN4-203ENST00000472638 PLAGL2Q9UPG8 496 aa22.13■■□□□ 1.13
UBQLN4-203ENST00000472638 PIN4Q9Y237 131 aaKnown RBP22.13■■□□□ 1.13
UBQLN4-203ENST00000472638 RALGAPA2Q2PPJ7 1873 aa22.13■■□□□ 1.13
UBQLN4-203ENST00000472638 MED24O75448 989 aa22.12■■□□□ 1.13
UBQLN4-203ENST00000472638 ITGB1P05556 798 aa22.12■■□□□ 1.13
UBQLN4-203ENST00000472638 SPATA31C1P0DKV0 1188 aa22.12■■□□□ 1.13
UBQLN4-203ENST00000472638 TRAPPC10P48553 1259 aa22.12■■□□□ 1.13
UBQLN4-203ENST00000472638 TOB1P50616 345 aaPredicted RBP22.12■■□□□ 1.13
UBQLN4-203ENST00000472638 AAK1Q2M2I8 961 aa22.12■■□□□ 1.13
UBQLN4-203ENST00000472638 LONRF3Q496Y0 759 aa22.12■■□□□ 1.13
UBQLN4-203ENST00000472638 CATSPER3Q86XQ3 398 aa22.12■■□□□ 1.13
UBQLN4-203ENST00000472638 NSUN3Q9H649 340 aaKnown RBP22.12■■□□□ 1.13
UBQLN4-203ENST00000472638 PCDHB6Q9Y5E3 794 aa22.12■■□□□ 1.13
UBQLN4-203ENST00000472638 A0A0U1RQF3 1178 aa22.11■■□□□ 1.13
UBQLN4-203ENST00000472638 GAS2O43903 313 aaKnown RBP22.11■■□□□ 1.13
UBQLN4-203ENST00000472638 DNAJB1P25685 340 aa22.11■■□□□ 1.13
UBQLN4-203ENST00000472638 RARRES1P49788 294 aa22.11■■□□□ 1.13
UBQLN4-203ENST00000472638 LARP1BQ659C4 914 aaKnown RBP22.11■■□□□ 1.13
UBQLN4-203ENST00000472638 TWF2Q6IBS0 349 aaKnown RBP22.11■■□□□ 1.13
UBQLN4-203ENST00000472638 EP400NLQ6ZTU2 488 aa22.11■■□□□ 1.13
UBQLN4-203ENST00000472638 FERMT3Q86UX7 667 aa22.11■■□□□ 1.13
UBQLN4-203ENST00000472638 ABI1Q8IZP0 508 aa22.11■■□□□ 1.13
UBQLN4-203ENST00000472638 C4orf32Q8N8J7 132 aa22.11■■□□□ 1.13
UBQLN4-203ENST00000472638 RNF149Q8NC42 400 aa22.11■■□□□ 1.13
UBQLN4-203ENST00000472638 ADAMTS19Q8TE59 1207 aa22.11■■□□□ 1.13
UBQLN4-203ENST00000472638 P2RX5Q93086 422 aa22.11■■□□□ 1.13
UBQLN4-203ENST00000472638 CASD1Q96PB1 797 aa22.11■■□□□ 1.13
UBQLN4-203ENST00000472638 TMEM117Q9H0C3 514 aa22.11■■□□□ 1.13
UBQLN4-203ENST00000472638 LMAN2LQ9H0V9 348 aa22.11■■□□□ 1.13
UBQLN4-203ENST00000472638 UBE2ZQ9H832 354 aaPredicted RBP22.11■■□□□ 1.13
UBQLN4-203ENST00000472638 MINDY3Q9H8M7 445 aa22.11■■□□□ 1.13
UBQLN4-203ENST00000472638 TUFT1Q9NNX1 390 aa22.11■■□□□ 1.13
UBQLN4-203ENST00000472638 CHST12Q9NRB3 414 aa22.11■■□□□ 1.13
UBQLN4-203ENST00000472638 DACT1Q9NYF0 836 aa22.11■■□□□ 1.13
UBQLN4-203ENST00000472638 HOXA2O43364 376 aa22.1■■□□□ 1.13
UBQLN4-203ENST00000472638 USO1O60763 962 aaKnown RBP22.1■■□□□ 1.13
UBQLN4-203ENST00000472638 ATF7P17544 494 aaPredicted RBP22.1■■□□□ 1.13
UBQLN4-203ENST00000472638 SYT1P21579 422 aa22.1■■□□□ 1.13
UBQLN4-203ENST00000472638 CLLU1OSQ5K130 101 aa22.1■■□□□ 1.13
UBQLN4-203ENST00000472638 MAEAQ7L5Y9 396 aa22.1■■□□□ 1.13
UBQLN4-203ENST00000472638 SPPL3Q8TCT6 385 aa22.1■■□□□ 1.13
UBQLN4-203ENST00000472638 HELQQ8TDG4 1101 aa22.1■■□□□ 1.13
UBQLN4-203ENST00000472638 CWH43Q9H720 699 aa22.1■■□□□ 1.13
UBQLN4-203ENST00000472638 PCDHB12Q9Y5F1 795 aa22.1■■□□□ 1.13
UBQLN4-203ENST00000472638 H3BQV1 296 aa22.09■■□□□ 1.13
UBQLN4-203ENST00000472638 ASAP2O43150 1006 aa22.09■■□□□ 1.13
UBQLN4-203ENST00000472638 STX6O43752 255 aa22.09■■□□□ 1.13
UBQLN4-203ENST00000472638 DGAT1O75907 488 aa22.09■■□□□ 1.13
UBQLN4-203ENST00000472638 BMP1P13497 986 aa22.09■■□□□ 1.13
UBQLN4-203ENST00000472638 KCNA5P22460 613 aa22.09■■□□□ 1.13
UBQLN4-203ENST00000472638 PHKA2P46019 1235 aa22.09■■□□□ 1.13
UBQLN4-203ENST00000472638 PTGDRQ13258 359 aa22.09■■□□□ 1.13
UBQLN4-203ENST00000472638 CAMK1Q14012 370 aa22.09■■□□□ 1.13
UBQLN4-203ENST00000472638 NAALADL2Q58DX5 795 aa22.09■■□□□ 1.13
UBQLN4-203ENST00000472638 POTEGQ6S5H5 508 aa22.09■■□□□ 1.13
UBQLN4-203ENST00000472638 LRRC55Q6ZSA7 311 aa22.09■■□□□ 1.13
UBQLN4-203ENST00000472638 SRGAP1Q7Z6B7 1085 aa22.09■■□□□ 1.13
UBQLN4-203ENST00000472638 ZNF598Q86UK7 904 aaKnown RBP22.09■■□□□ 1.13
UBQLN4-203ENST00000472638 COLGALT1Q8NBJ5 622 aa22.09■■□□□ 1.13
UBQLN4-203ENST00000472638 ERMNQ8TAM6 284 aa22.09■■□□□ 1.13
UBQLN4-203ENST00000472638 ASAP3Q8TDY4 903 aa22.09■■□□□ 1.13
UBQLN4-203ENST00000472638 POF1BQ8WVV4 589 aa22.09■■□□□ 1.13
UBQLN4-203ENST00000472638 LPPQ93052 612 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms