RNA–Protein interactions for RNA: ENST00000470482.5

HDLBP-232, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-232ENST00000470482 SEPT9Q9UHD8 586 aaPredicted RBP13.15□□□□□ -0.3
HDLBP-232ENST00000470482 PLXNA4Q9HCM2 1894 aa13.14□□□□□ -0.31
HDLBP-232ENST00000470482 TBKBP1A7MCY6 615 aa13.14□□□□□ -0.31
HDLBP-232ENST00000470482 H3BQ06 376 aaPredicted RBP13.14□□□□□ -0.31
HDLBP-232ENST00000470482 LINC01565O15544 149 aa13.14□□□□□ -0.31
HDLBP-232ENST00000470482 TBX10O75333 385 aa13.14□□□□□ -0.31
HDLBP-232ENST00000470482 EYA4O95677 639 aa13.14□□□□□ -0.31
HDLBP-232ENST00000470482 GLP2RO95838 553 aa13.14□□□□□ -0.31
HDLBP-232ENST00000470482 SPATA31C1P0DKV0 1188 aa13.14□□□□□ -0.31
HDLBP-232ENST00000470482 IL9P15248 144 aa13.14□□□□□ -0.31
HDLBP-232ENST00000470482 PUS10Q3MIT2 529 aaKnown RBP13.14□□□□□ -0.31
HDLBP-232ENST00000470482 UBXN11Q5T124 520 aa13.14□□□□□ -0.31
HDLBP-232ENST00000470482 MRPL10Q7Z7H8 261 aaKnown RBP13.14□□□□□ -0.31
HDLBP-232ENST00000470482 IFNLR1Q8IU57 520 aaPredicted RBP13.14□□□□□ -0.31
HDLBP-232ENST00000470482 EFHBQ8N7U6 833 aa13.14□□□□□ -0.31
HDLBP-232ENST00000470482 FBXO18Q8NFZ0 1043 aa13.14□□□□□ -0.31
HDLBP-232ENST00000470482 PRPF31Q8WWY3 499 aaKnown RBP13.14□□□□□ -0.31
HDLBP-232ENST00000470482 EIF2AK1Q9BQI3 630 aaKnown RBP13.14□□□□□ -0.31
HDLBP-232ENST00000470482 LXNQ9BS40 222 aa13.14□□□□□ -0.31
HDLBP-232ENST00000470482 GCOM2Q9BZD3 368 aaPredicted RBP13.14□□□□□ -0.31
HDLBP-232ENST00000470482 EPHX3Q9H6B9 360 aa13.14□□□□□ -0.31
HDLBP-232ENST00000470482 ZSWIM4Q9H7M6 989 aa13.14□□□□□ -0.31
HDLBP-232ENST00000470482 LRFN2Q9ULH4 789 aa13.14□□□□□ -0.31
HDLBP-232ENST00000470482 LZTS1Q9Y250 596 aa13.14□□□□□ -0.31
HDLBP-232ENST00000470482 PCDHGC5Q9Y5F6 944 aa13.14□□□□□ -0.31
HDLBP-232ENST00000470482 PI4K2BG5E9Z4 385 aa13.13□□□□□ -0.31
HDLBP-232ENST00000470482 FGF18O76093 207 aa13.13□□□□□ -0.31
HDLBP-232ENST00000470482 XRCC6P12956 609 aaKnown RBP eCLIP13.13□□□□□ -0.31
HDLBP-232ENST00000470482 YWHABP31946 246 aaKnown RBP13.13□□□□□ -0.31
HDLBP-232ENST00000470482 RFC5P40937 340 aa13.13□□□□□ -0.31
HDLBP-232ENST00000470482 PHKA2P46019 1235 aa13.13□□□□□ -0.31
HDLBP-232ENST00000470482 POU5F1BQ06416 359 aa13.13□□□□□ -0.31
HDLBP-232ENST00000470482 CTTNQ14247 550 aaKnown RBP13.13□□□□□ -0.31
HDLBP-232ENST00000470482 PTCRAQ6ISU1 281 aaPredicted RBP13.13□□□□□ -0.31
HDLBP-232ENST00000470482 TMEM184AQ6ZMB5 413 aa13.13□□□□□ -0.31
HDLBP-232ENST00000470482 VN1R2Q8NFZ6 395 aa13.13□□□□□ -0.31
HDLBP-232ENST00000470482 JPH2Q9BR39 696 aaPredicted RBP13.13□□□□□ -0.31
HDLBP-232ENST00000470482 PCDHA12Q9UN75 941 aa13.13□□□□□ -0.31
HDLBP-232ENST00000470482 MEIS3P2A8K0S8 358 aa13.12□□□□□ -0.31
HDLBP-232ENST00000470482 INPPL1O15357 1258 aa13.12□□□□□ -0.31
HDLBP-232ENST00000470482 HOXA2O43364 376 aa13.12□□□□□ -0.31
HDLBP-232ENST00000470482 DKC1O60832 514 aaKnown RBP eCLIP13.12□□□□□ -0.31
HDLBP-232ENST00000470482 EFEMP2O95967 443 aa13.12□□□□□ -0.31
HDLBP-232ENST00000470482 ZSCAN20P17040 1043 aaPredicted RBP13.12□□□□□ -0.31
HDLBP-232ENST00000470482 ARL2P36404 184 aa13.12□□□□□ -0.31
HDLBP-232ENST00000470482 DNM2P50570 870 aa13.12□□□□□ -0.31
HDLBP-232ENST00000470482 ZP2Q05996 745 aa13.12□□□□□ -0.31
HDLBP-232ENST00000470482 LAMTOR4Q0VGL1 99 aa13.12□□□□□ -0.31
HDLBP-232ENST00000470482 SMAD2Q15796 467 aaKnown RBP13.12□□□□□ -0.31
HDLBP-232ENST00000470482 AMHR2Q16671 573 aa13.12□□□□□ -0.31
HDLBP-232ENST00000470482 CSPP1Q1MSJ5 1256 aa13.12□□□□□ -0.31
HDLBP-232ENST00000470482 SRGAP1Q7Z6B7 1085 aa13.12□□□□□ -0.31
HDLBP-232ENST00000470482 FERMT3Q86UX7 667 aa13.12□□□□□ -0.31
HDLBP-232ENST00000470482 RHPN2Q8IUC4 686 aa13.12□□□□□ -0.31
HDLBP-232ENST00000470482 NLRP7Q8WX94 980 aa13.12□□□□□ -0.31
HDLBP-232ENST00000470482 TMEM143Q96AN5 459 aa13.12□□□□□ -0.31
HDLBP-232ENST00000470482 CEP170P1Q96L14 293 aa13.12□□□□□ -0.31
HDLBP-232ENST00000470482 INO80BQ9C086 356 aaPredicted RBP13.12□□□□□ -0.31
HDLBP-232ENST00000470482 TTC12Q9H892 705 aaPredicted RBP13.12□□□□□ -0.31
HDLBP-232ENST00000470482 ANKEF1Q9NU02 776 aa13.12□□□□□ -0.31
HDLBP-232ENST00000470482 AGPAT5Q9NUQ2 364 aa13.12□□□□□ -0.31
HDLBP-232ENST00000470482 COL4A3BPQ9Y5P4 624 aa13.12□□□□□ -0.31
HDLBP-232ENST00000470482 ASAP2O43150 1006 aa13.11□□□□□ -0.31
HDLBP-232ENST00000470482 MBTPS2O43462 519 aa13.11□□□□□ -0.31
HDLBP-232ENST00000470482 GAS2O43903 313 aaKnown RBP13.11□□□□□ -0.31
HDLBP-232ENST00000470482 B4GALT3O60512 393 aa13.11□□□□□ -0.31
HDLBP-232ENST00000470482 OFD1O75665 1012 aa13.11□□□□□ -0.31
HDLBP-232ENST00000470482 BAG4O95429 457 aaKnown RBP13.11□□□□□ -0.31
HDLBP-232ENST00000470482 LAG3P18627 525 aa13.11□□□□□ -0.31
HDLBP-232ENST00000470482 U2AF2P26368 475 aaKnown RBP eCLIP13.11□□□□□ -0.31
HDLBP-232ENST00000470482 PTENP60484 403 aa13.11□□□□□ -0.31
HDLBP-232ENST00000470482 COASYQ13057 564 aa13.11□□□□□ -0.31
HDLBP-232ENST00000470482 NCAPH2Q6IBW4 605 aa13.11□□□□□ -0.31
HDLBP-232ENST00000470482 KCNT2Q6UVM3 1135 aa13.11□□□□□ -0.31
HDLBP-232ENST00000470482 EXOC8Q8IYI6 725 aa13.11□□□□□ -0.31
HDLBP-232ENST00000470482 SLC39A11Q8N1S5 342 aa13.11□□□□□ -0.31
HDLBP-232ENST00000470482 RSPH1Q8WYR4 309 aa13.11□□□□□ -0.31
HDLBP-232ENST00000470482 MRPS27Q92552 414 aaKnown RBP13.11□□□□□ -0.31
HDLBP-232ENST00000470482 ZSCAN31Q96LW9 406 aaPredicted RBP13.11□□□□□ -0.31
HDLBP-232ENST00000470482 FOXP1Q9H334 677 aaPredicted RBP13.11□□□□□ -0.31
HDLBP-232ENST00000470482 CLDND1Q9NY35 253 aa13.11□□□□□ -0.31
HDLBP-232ENST00000470482 DACT1Q9NYF0 836 aa13.11□□□□□ -0.31
HDLBP-232ENST00000470482 PRKAG3Q9UGI9 489 aa13.11□□□□□ -0.31
HDLBP-232ENST00000470482 PCDHB12Q9Y5F1 795 aa13.11□□□□□ -0.31
HDLBP-232ENST00000470482 CENPBP07199 599 aaPredicted RBP13.1□□□□□ -0.31
HDLBP-232ENST00000470482 RARRES1P49788 294 aa13.1□□□□□ -0.31
HDLBP-232ENST00000470482 TOB1P50616 345 aaPredicted RBP13.1□□□□□ -0.31
HDLBP-232ENST00000470482 AFF1P51825 1210 aaKnown RBP13.1□□□□□ -0.31
HDLBP-232ENST00000470482 CYP4A11Q02928 519 aa13.1□□□□□ -0.31
HDLBP-232ENST00000470482 ORC2Q13416 577 aaPredicted RBP13.1□□□□□ -0.31
HDLBP-232ENST00000470482 EMC2Q15006 297 aa13.1□□□□□ -0.31
HDLBP-232ENST00000470482 CALCRLQ16602 461 aa13.1□□□□□ -0.31
HDLBP-232ENST00000470482 DUSP6Q16828 381 aa13.1□□□□□ -0.31
HDLBP-232ENST00000470482 PDE12Q6L8Q7 609 aaKnown RBP13.1□□□□□ -0.31
HDLBP-232ENST00000470482 AGMOQ6ZNB7 445 aa13.1□□□□□ -0.31
HDLBP-232ENST00000470482 OTUD6AQ7L8S5 288 aa13.1□□□□□ -0.31
HDLBP-232ENST00000470482 CATSPER3Q86XQ3 398 aa13.1□□□□□ -0.31
HDLBP-232ENST00000470482 CCDC83Q8IWF9 413 aa13.1□□□□□ -0.31
HDLBP-232ENST00000470482 TPH2Q8IWU9 490 aa13.1□□□□□ -0.31
HDLBP-232ENST00000470482 GJD3Q8N144 294 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms