RNA–Protein interactions for RNA: ENST00000470115.1

GTF3C2-209, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-209ENST00000470115 BMP2KQ9NSY1 1161 aaPredicted RBP18.32■□□□□ 0.52
GTF3C2-209ENST00000470115 RNF19AQ9NV58 838 aa18.32■□□□□ 0.52
GTF3C2-209ENST00000470115 PPME1Q9Y570 386 aa18.32■□□□□ 0.52
GTF3C2-209ENST00000470115 NCOR1O75376 2440 aa18.32■□□□□ 0.52
GTF3C2-209ENST00000470115 KIAA1671Q9BY89 1806 aa18.31■□□□□ 0.52
GTF3C2-209ENST00000470115 RFC5P40937 340 aa18.31■□□□□ 0.52
GTF3C2-209ENST00000470115 RABEP1Q15276 862 aa18.31■□□□□ 0.52
GTF3C2-209ENST00000470115 FAM184AQ8NB25 1140 aa18.31■□□□□ 0.52
GTF3C2-209ENST00000470115 CASD1Q96PB1 797 aa18.31■□□□□ 0.52
GTF3C2-209ENST00000470115 INO80BQ9C086 356 aaPredicted RBP18.31■□□□□ 0.52
GTF3C2-209ENST00000470115 TMEM117Q9H0C3 514 aa18.31■□□□□ 0.52
GTF3C2-209ENST00000470115 FOXP1Q9H334 677 aaPredicted RBP18.31■□□□□ 0.52
GTF3C2-209ENST00000470115 PCDHB12Q9Y5F1 795 aa18.31■□□□□ 0.52
GTF3C2-209ENST00000470115 COL4A3BPQ9Y5P4 624 aa18.31■□□□□ 0.52
GTF3C2-209ENST00000470115 FNDC1Q4ZHG4 1894 aaPredicted RBP18.31■□□□□ 0.52
GTF3C2-209ENST00000470115 A0A0U1RQF3 1178 aa18.3■□□□□ 0.52
GTF3C2-209ENST00000470115 LYPLA2O95372 231 aa18.3■□□□□ 0.52
GTF3C2-209ENST00000470115 SRGAP2CP0DJJ0 459 aa18.3■□□□□ 0.52
GTF3C2-209ENST00000470115 SFPQP23246 707 aaKnown RBP eCLIP18.3■□□□□ 0.52
GTF3C2-209ENST00000470115 LAMTOR4Q0VGL1 99 aa18.3■□□□□ 0.52
GTF3C2-209ENST00000470115 EMC2Q15006 297 aa18.3■□□□□ 0.52
GTF3C2-209ENST00000470115 ZNF174Q15697 407 aa18.3■□□□□ 0.52
GTF3C2-209ENST00000470115 EP400NLQ6ZTU2 488 aa18.3■□□□□ 0.52
GTF3C2-209ENST00000470115 CATSPER4Q7RTX7 472 aa18.3■□□□□ 0.52
GTF3C2-209ENST00000470115 POF1BQ8WVV4 589 aa18.3■□□□□ 0.52
GTF3C2-209ENST00000470115 CWH43Q9H720 699 aa18.3■□□□□ 0.52
GTF3C2-209ENST00000470115 IFT122Q9HBG6 1241 aa18.3■□□□□ 0.52
GTF3C2-209ENST00000470115 CHST12Q9NRB3 414 aa18.3■□□□□ 0.52
GTF3C2-209ENST00000470115 AAASQ9NRG9 546 aa18.3■□□□□ 0.52
GTF3C2-209ENST00000470115 DACT1Q9NYF0 836 aa18.3■□□□□ 0.52
GTF3C2-209ENST00000470115 A0A087WWV3 80 aa18.29■□□□□ 0.52
GTF3C2-209ENST00000470115 POTEMA6NI47 508 aa18.29■□□□□ 0.52
GTF3C2-209ENST00000470115 HOXA2O43364 376 aa18.29■□□□□ 0.52
GTF3C2-209ENST00000470115 EOMESO95936 686 aa18.29■□□□□ 0.52
GTF3C2-209ENST00000470115 HYAL1Q12794 435 aa18.29■□□□□ 0.52
GTF3C2-209ENST00000470115 GNL2Q13823 731 aaKnown RBP18.29■□□□□ 0.52
GTF3C2-209ENST00000470115 COL19A1Q14993 1142 aa18.29■□□□□ 0.52
GTF3C2-209ENST00000470115 LEXMQ3ZCV2 418 aa18.29■□□□□ 0.52
GTF3C2-209ENST00000470115 LRRC55Q6ZSA7 311 aa18.29■□□□□ 0.52
GTF3C2-209ENST00000470115 ZNF598Q86UK7 904 aaKnown RBP18.29■□□□□ 0.52
GTF3C2-209ENST00000470115 COLGALT1Q8NBJ5 622 aa18.29■□□□□ 0.52
GTF3C2-209ENST00000470115 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.29■□□□□ 0.52
GTF3C2-209ENST00000470115 PSPC1Q8WXF1 523 aaKnown RBP18.29■□□□□ 0.52
GTF3C2-209ENST00000470115 PABPC5Q96DU9 382 aaKnown RBP18.29■□□□□ 0.52
GTF3C2-209ENST00000470115 IGFLR1Q9H665 355 aa18.29■□□□□ 0.52
GTF3C2-209ENST00000470115 CLDND1Q9NY35 253 aa18.29■□□□□ 0.52
GTF3C2-209ENST00000470115 PIN4Q9Y237 131 aaKnown RBP18.29■□□□□ 0.52
GTF3C2-209ENST00000470115 H3BQ06 376 aaPredicted RBP18.28■□□□□ 0.52
GTF3C2-209ENST00000470115 GAS2O43903 313 aaKnown RBP18.28■□□□□ 0.52
GTF3C2-209ENST00000470115 ATF7P17544 494 aaPredicted RBP18.28■□□□□ 0.52
GTF3C2-209ENST00000470115 IRS1P35568 1242 aa18.28■□□□□ 0.52
GTF3C2-209ENST00000470115 PHKA2P46019 1235 aa18.28■□□□□ 0.52
GTF3C2-209ENST00000470115 CLLU1OSQ5K130 101 aa18.28■□□□□ 0.52
GTF3C2-209ENST00000470115 TWF2Q6IBS0 349 aaKnown RBP18.28■□□□□ 0.52
GTF3C2-209ENST00000470115 NOSTRINQ8IVI9 506 aa18.28■□□□□ 0.52
GTF3C2-209ENST00000470115 ABI1Q8IZP0 508 aa18.28■□□□□ 0.52
GTF3C2-209ENST00000470115 NEK9Q8TD19 979 aa18.28■□□□□ 0.52
GTF3C2-209ENST00000470115 HELQQ8TDG4 1101 aa18.28■□□□□ 0.52
GTF3C2-209ENST00000470115 PIGOQ8TEQ8 1089 aa18.28■□□□□ 0.52
GTF3C2-209ENST00000470115 TCP11Q8WWU5 503 aa18.28■□□□□ 0.52
GTF3C2-209ENST00000470115 MINDY3Q9H8M7 445 aa18.28■□□□□ 0.52
GTF3C2-209ENST00000470115 XPNPEP1Q9NQW7 623 aa18.28■□□□□ 0.52
GTF3C2-209ENST00000470115 ANKEF1Q9NU02 776 aa18.28■□□□□ 0.52
GTF3C2-209ENST00000470115 ATG2AQ2TAZ0 1938 aa18.27■□□□□ 0.52
GTF3C2-209ENST00000470115 ASAP2O43150 1006 aa18.27■□□□□ 0.52
GTF3C2-209ENST00000470115 NCK2O43639 380 aa18.27■□□□□ 0.52
GTF3C2-209ENST00000470115 ST18O60284 1047 aa18.27■□□□□ 0.52
GTF3C2-209ENST00000470115 FGF18O76093 207 aa18.27■□□□□ 0.52
GTF3C2-209ENST00000470115 SPATA31C1P0DKV0 1188 aa18.27■□□□□ 0.52
GTF3C2-209ENST00000470115 GTF2F1P35269 517 aaKnown RBP eCLIP18.27■□□□□ 0.52
GTF3C2-209ENST00000470115 LONRF3Q496Y0 759 aa18.27■□□□□ 0.52
GTF3C2-209ENST00000470115 SRGAP1Q7Z6B7 1085 aa18.27■□□□□ 0.52
GTF3C2-209ENST00000470115 FERMT3Q86UX7 667 aa18.27■□□□□ 0.52
GTF3C2-209ENST00000470115 THNSL1Q8IYQ7 743 aa18.27■□□□□ 0.52
GTF3C2-209ENST00000470115 MTRQ99707 1265 aa18.27■□□□□ 0.52
GTF3C2-209ENST00000470115 TRAIPQ9BWF2 469 aa18.27■□□□□ 0.52
GTF3C2-209ENST00000470115 UPF2Q9HAU5 1272 aaKnown RBP18.27■□□□□ 0.52
GTF3C2-209ENST00000470115 LAG3P18627 525 aa18.26■□□□□ 0.51
GTF3C2-209ENST00000470115 LTBRP36941 435 aa18.26■□□□□ 0.51
GTF3C2-209ENST00000470115 TECP42680 631 aa18.26■□□□□ 0.51
GTF3C2-209ENST00000470115 ORC2Q13416 577 aaPredicted RBP18.26■□□□□ 0.51
GTF3C2-209ENST00000470115 CTC1Q2NKJ3 1217 aa18.26■□□□□ 0.51
GTF3C2-209ENST00000470115 TTC38Q5R3I4 469 aa18.26■□□□□ 0.51
GTF3C2-209ENST00000470115 PTCRAQ6ISU1 281 aaPredicted RBP18.26■□□□□ 0.51
GTF3C2-209ENST00000470115 ADGRD2Q7Z7M1 963 aa18.26■□□□□ 0.51
GTF3C2-209ENST00000470115 RNF149Q8NC42 400 aa18.26■□□□□ 0.51
GTF3C2-209ENST00000470115 LPPQ93052 612 aa18.26■□□□□ 0.51
GTF3C2-209ENST00000470115 CCDC43Q96MW1 224 aaKnown RBP18.26■□□□□ 0.51
GTF3C2-209ENST00000470115 PCDHGC5Q9Y5F6 944 aa18.26■□□□□ 0.51
GTF3C2-209ENST00000470115 LINC01565O15544 149 aa18.25■□□□□ 0.51
GTF3C2-209ENST00000470115 CD2BP2O95400 341 aaKnown RBP18.25■□□□□ 0.51
GTF3C2-209ENST00000470115 OR52Z1P0C646 297 aa18.25■□□□□ 0.51
GTF3C2-209ENST00000470115 U2AF2P26368 475 aaKnown RBP eCLIP18.25■□□□□ 0.513e-13■■■□□ 17.2
GTF3C2-209ENST00000470115 PBX3P40426 434 aa18.25■□□□□ 0.51
GTF3C2-209ENST00000470115 UBE3AQ05086 875 aa18.25■□□□□ 0.51
GTF3C2-209ENST00000470115 NBR1Q14596 966 aa18.25■□□□□ 0.51
GTF3C2-209ENST00000470115 CSPP1Q1MSJ5 1256 aa18.25■□□□□ 0.51
GTF3C2-209ENST00000470115 KCNT2Q6UVM3 1135 aa18.25■□□□□ 0.51
GTF3C2-209ENST00000470115 CATSPER3Q86XQ3 398 aa18.25■□□□□ 0.51
GTF3C2-209ENST00000470115 LRRC43Q8N309 656 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms