RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 KRT17Q04695 432 aa13.82□□□□□ -0.2
HDAC3-204ENST00000469207 TCF15Q12870 199 aa13.82□□□□□ -0.2
HDAC3-204ENST00000469207 LRRC43Q8N309 656 aa13.82□□□□□ -0.2
HDAC3-204ENST00000469207 FBXL16Q8N461 479 aa13.82□□□□□ -0.2
HDAC3-204ENST00000469207 MRPL43Q8N983 215 aaKnown RBP13.82□□□□□ -0.2
HDAC3-204ENST00000469207 ZNF579Q8NAF0 562 aaKnown RBP13.82□□□□□ -0.2
HDAC3-204ENST00000469207 ASIC4Q96FT7 647 aa13.82□□□□□ -0.2
HDAC3-204ENST00000469207 RIT2Q99578 217 aa13.82□□□□□ -0.2
HDAC3-204ENST00000469207 SMOC2Q9H3U7 446 aa13.82□□□□□ -0.2
HDAC3-204ENST00000469207 NGRNQ9NPE2 291 aaKnown RBP13.82□□□□□ -0.2
HDAC3-204ENST00000469207 TSHZ2Q9NRE2 1034 aa13.82□□□□□ -0.2
HDAC3-204ENST00000469207 SEPT9Q9UHD8 586 aaPredicted RBP13.82□□□□□ -0.2
HDAC3-204ENST00000469207 HCFC2Q9Y5Z7 792 aa13.82□□□□□ -0.2
HDAC3-204ENST00000469207 NID2Q14112 1375 aa13.82□□□□□ -0.2
HDAC3-204ENST00000469207 HOXA2O43364 376 aa13.81□□□□□ -0.2
HDAC3-204ENST00000469207 CLASP2O75122 1294 aaKnown RBP13.81□□□□□ -0.2
HDAC3-204ENST00000469207 EOMESO95936 686 aa13.81□□□□□ -0.2
HDAC3-204ENST00000469207 SIGLEC14Q08ET2 396 aa13.81□□□□□ -0.2
HDAC3-204ENST00000469207 STK3Q13188 491 aa13.81□□□□□ -0.2
HDAC3-204ENST00000469207 NPY5RQ15761 445 aa13.81□□□□□ -0.2
HDAC3-204ENST00000469207 Q4G0T1 1027 aa13.81□□□□□ -0.2
HDAC3-204ENST00000469207 PLA2G4FQ68DD2 849 aa13.81□□□□□ -0.2
HDAC3-204ENST00000469207 B3GNT9Q6UX72 402 aa13.81□□□□□ -0.2
HDAC3-204ENST00000469207 FAM43BQ6ZT52 329 aaPredicted RBP13.81□□□□□ -0.2
HDAC3-204ENST00000469207 RHPN2Q8IUC4 686 aa13.81□□□□□ -0.2
HDAC3-204ENST00000469207 FBXL6Q8N531 539 aa13.81□□□□□ -0.2
HDAC3-204ENST00000469207 CCDC148Q8NFR7 591 aa13.81□□□□□ -0.2
HDAC3-204ENST00000469207 BCL7CQ8WUZ0 217 aaPredicted RBP13.81□□□□□ -0.2
HDAC3-204ENST00000469207 NIFKQ9BYG3 293 aaKnown RBP13.81□□□□□ -0.2
HDAC3-204ENST00000469207 POMKQ9H5K3 350 aa13.81□□□□□ -0.2
HDAC3-204ENST00000469207 FAM86C1Q9NVL1 165 aa13.81□□□□□ -0.2
HDAC3-204ENST00000469207 PCDHA4Q9UN74 947 aa13.81□□□□□ -0.2
HDAC3-204ENST00000469207 PIEZO1Q92508 2521 aa13.8□□□□□ -0.2
HDAC3-204ENST00000469207 IGKV6-21A0A0C4DH24 114 aa13.8□□□□□ -0.2
HDAC3-204ENST00000469207 C2CD4DB7Z1M9 353 aa13.8□□□□□ -0.2
HDAC3-204ENST00000469207 M0R2N6 131 aa13.8□□□□□ -0.2
HDAC3-204ENST00000469207 EML1O00423 815 aa13.8□□□□□ -0.2
HDAC3-204ENST00000469207 B4GALT3O60512 393 aa13.8□□□□□ -0.2
HDAC3-204ENST00000469207 ZC3H11AO75152 810 aaKnown RBP eCLIP13.8□□□□□ -0.24e-10■■■■□ 22.8
HDAC3-204ENST00000469207 AVPR2P30518 371 aa13.8□□□□□ -0.2
HDAC3-204ENST00000469207 SFNP31947 248 aa13.8□□□□□ -0.2
HDAC3-204ENST00000469207 PHKA2P46019 1235 aa13.8□□□□□ -0.2
HDAC3-204ENST00000469207 ALDH7A1P49419 539 aaKnown RBP13.8□□□□□ -0.2
HDAC3-204ENST00000469207 AFF1P51825 1210 aaKnown RBP13.8□□□□□ -0.2
HDAC3-204ENST00000469207 JAK3P52333 1124 aa13.8□□□□□ -0.2
HDAC3-204ENST00000469207 EVCP57679 992 aa13.8□□□□□ -0.2
HDAC3-204ENST00000469207 SSRP1Q08945 709 aaKnown RBP13.8□□□□□ -0.2
HDAC3-204ENST00000469207 SMC1AQ14683 1233 aaKnown RBP13.8□□□□□ -0.2
HDAC3-204ENST00000469207 PTPN21Q16825 1174 aa13.8□□□□□ -0.2
HDAC3-204ENST00000469207 ANO5Q75V66 913 aa13.8□□□□□ -0.2
HDAC3-204ENST00000469207 SUGP1Q8IWZ8 645 aaKnown RBP13.8□□□□□ -0.2
HDAC3-204ENST00000469207 VPS52Q8N1B4 723 aa13.8□□□□□ -0.2
HDAC3-204ENST00000469207 GCOM2Q9BZD3 368 aaPredicted RBP13.8□□□□□ -0.2
HDAC3-204ENST00000469207 NRDE2Q9H7Z3 1164 aa13.8□□□□□ -0.2
HDAC3-204ENST00000469207 SH3GLB2Q9NR46 395 aa13.8□□□□□ -0.2
HDAC3-204ENST00000469207 SUCLA2Q9P2R7 463 aaPredicted RBP13.8□□□□□ -0.2
HDAC3-204ENST00000469207 KCNJ14Q9UNX9 436 aa13.8□□□□□ -0.2
HDAC3-204ENST00000469207 INPP5FQ9Y2H2 1132 aa13.8□□□□□ -0.2
HDAC3-204ENST00000469207 MYO10Q9HD67 2058 aa13.79□□□□□ -0.2
HDAC3-204ENST00000469207 CYP3A7-CYP3A51PA0A087WV96 503 aa13.79□□□□□ -0.2
HDAC3-204ENST00000469207 SLC37A4O43826 429 aa13.79□□□□□ -0.2
HDAC3-204ENST00000469207 MAFO75444 373 aaPredicted RBP13.79□□□□□ -0.2
HDAC3-204ENST00000469207 EPCAMP16422 314 aa13.79□□□□□ -0.2
HDAC3-204ENST00000469207 CYP3A7P24462 503 aa13.79□□□□□ -0.2
HDAC3-204ENST00000469207 PSMA5P28066 241 aa13.79□□□□□ -0.2
HDAC3-204ENST00000469207 PPM1AP35813 382 aa13.79□□□□□ -0.2
HDAC3-204ENST00000469207 NPEPPSP55786 919 aa13.79□□□□□ -0.2
HDAC3-204ENST00000469207 INF2Q27J81 1249 aa13.79□□□□□ -0.2
HDAC3-204ENST00000469207 XKR3Q5GH77 459 aa13.79□□□□□ -0.2
HDAC3-204ENST00000469207 RARS2Q5T160 578 aaKnown RBP13.79□□□□□ -0.2
HDAC3-204ENST00000469207 TWF2Q6IBS0 349 aaKnown RBP13.79□□□□□ -0.2
HDAC3-204ENST00000469207 RUFY3Q7L099 469 aa13.79□□□□□ -0.2
HDAC3-204ENST00000469207 ZBTB33Q86T24 672 aa13.79□□□□□ -0.2
HDAC3-204ENST00000469207 ZNF280BQ86YH2 543 aa13.79□□□□□ -0.2
HDAC3-204ENST00000469207 BLIDQ8IZY5 108 aa13.79□□□□□ -0.2
HDAC3-204ENST00000469207 ETNPPLQ8TBG4 499 aa13.79□□□□□ -0.2
HDAC3-204ENST00000469207 GBP3Q9H0R5 595 aa13.79□□□□□ -0.2
HDAC3-204ENST00000469207 ADAM7Q9H2U9 754 aa13.79□□□□□ -0.2
HDAC3-204ENST00000469207 ZSWIM6Q9HCJ5 1215 aa13.79□□□□□ -0.2
HDAC3-204ENST00000469207 BMP2KQ9NSY1 1161 aaPredicted RBP13.79□□□□□ -0.2
HDAC3-204ENST00000469207 GJB4Q9NTQ9 266 aa13.79□□□□□ -0.2
HDAC3-204ENST00000469207 WRAP73Q9P2S5 460 aaPredicted RBP13.79□□□□□ -0.2
HDAC3-204ENST00000469207 DNAJB4Q9UDY4 337 aa13.79□□□□□ -0.2
HDAC3-204ENST00000469207 USP34Q70CQ2 3546 aa13.78□□□□□ -0.2
HDAC3-204ENST00000469207 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.78□□□□□ -0.2
HDAC3-204ENST00000469207 ZBTB39O15060 712 aa13.78□□□□□ -0.2
HDAC3-204ENST00000469207 OFD1O75665 1012 aa13.78□□□□□ -0.2
HDAC3-204ENST00000469207 BRD1O95696 1058 aa13.78□□□□□ -0.2
HDAC3-204ENST00000469207 ASGR2P07307 311 aa13.78□□□□□ -0.2
HDAC3-204ENST00000469207 GALTP07902 379 aa13.78□□□□□ -0.2
HDAC3-204ENST00000469207 SRGAP2BP0DMP2 458 aa13.78□□□□□ -0.2
HDAC3-204ENST00000469207 HOXB8P17481 243 aaPredicted RBP13.78□□□□□ -0.2
HDAC3-204ENST00000469207 KREMEN2Q8NCW0 462 aa13.78□□□□□ -0.2
HDAC3-204ENST00000469207 CASP10Q92851 521 aa13.78□□□□□ -0.2
HDAC3-204ENST00000469207 TMEM169Q96HH4 297 aa13.78□□□□□ -0.2
HDAC3-204ENST00000469207 IGSF21Q96ID5 467 aa13.78□□□□□ -0.2
HDAC3-204ENST00000469207 RIPOR3Q96MK2 946 aa13.78□□□□□ -0.2
HDAC3-204ENST00000469207 NLRP4Q96MN2 994 aa13.78□□□□□ -0.2
HDAC3-204ENST00000469207 MBOAT7Q96N66 472 aa13.78□□□□□ -0.2
HDAC3-204ENST00000469207 VN1R3Q9BXE9 311 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms