RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 PRAMEF25A6NGN4 478 aa5.81□□□□□ -1.48
SCFD1-205ENST00000469043 MAN2B1O00754 1011 aa5.81□□□□□ -1.48
SCFD1-205ENST00000469043 PDE8AO60658 829 aa5.81□□□□□ -1.48
SCFD1-205ENST00000469043 ADH4P08319 380 aa5.81□□□□□ -1.48
SCFD1-205ENST00000469043 PYGMP11217 842 aa5.81□□□□□ -1.48
SCFD1-205ENST00000469043 PDE6AP16499 860 aa5.81□□□□□ -1.48
SCFD1-205ENST00000469043 KRT15P19012 456 aa5.81□□□□□ -1.48
SCFD1-205ENST00000469043 AOAHP28039 575 aa5.81□□□□□ -1.48
SCFD1-205ENST00000469043 MSX2P35548 267 aaPredicted RBP5.81□□□□□ -1.48
SCFD1-205ENST00000469043 HERVK_113P62684 666 aa5.81□□□□□ -1.48
SCFD1-205ENST00000469043 DUSP8Q13202 625 aa5.81□□□□□ -1.48
SCFD1-205ENST00000469043 TUBA3CQ13748 450 aa5.81□□□□□ -1.48
SCFD1-205ENST00000469043 GRM7Q14831 915 aa5.81□□□□□ -1.48
SCFD1-205ENST00000469043 STILQ15468 1287 aa5.81□□□□□ -1.48
SCFD1-205ENST00000469043 TUBA3EQ6PEY2 450 aa5.81□□□□□ -1.48
SCFD1-205ENST00000469043 SLC4A10Q6U841 1118 aa5.81□□□□□ -1.48
SCFD1-205ENST00000469043 LARP4Q71RC2 724 aaKnown RBP eCLIP5.81□□□□□ -1.48
SCFD1-205ENST00000469043 ADGRE4PQ86SQ3 457 aa5.81□□□□□ -1.48
SCFD1-205ENST00000469043 FAM9BQ8IZU0 186 aa5.81□□□□□ -1.48
SCFD1-205ENST00000469043 THEMISQ8N1K5 641 aaPredicted RBP5.81□□□□□ -1.48
SCFD1-205ENST00000469043 CACTINQ8WUQ7 758 aaKnown RBP5.81□□□□□ -1.48
SCFD1-205ENST00000469043 PPM1EQ8WY54 764 aa5.81□□□□□ -1.48
SCFD1-205ENST00000469043 SPATA9Q9BWV2 254 aa5.81□□□□□ -1.48
SCFD1-205ENST00000469043 KIAA1683Q9H0B3 1180 aa5.81□□□□□ -1.48
SCFD1-205ENST00000469043 OR10A2Q9H208 303 aa5.81□□□□□ -1.48
SCFD1-205ENST00000469043 TLR9Q9NR96 1032 aa5.81□□□□□ -1.48
SCFD1-205ENST00000469043 FBXO9Q9UK97 447 aaPredicted RBP5.81□□□□□ -1.48
SCFD1-205ENST00000469043 A0A0G2JNJ9 132 aa5.8□□□□□ -1.48
SCFD1-205ENST00000469043 AKAP10O43572 662 aa5.8□□□□□ -1.48
SCFD1-205ENST00000469043 KATNA1O75449 491 aa5.8□□□□□ -1.48
SCFD1-205ENST00000469043 FGAP02671 866 aa5.8□□□□□ -1.48
SCFD1-205ENST00000469043 CD53P19397 219 aa5.8□□□□□ -1.48
SCFD1-205ENST00000469043 MAKP20794 623 aa5.8□□□□□ -1.48
SCFD1-205ENST00000469043 PTMSP20962 102 aa5.8□□□□□ -1.48
SCFD1-205ENST00000469043 BDNFP23560 247 aa5.8□□□□□ -1.48
SCFD1-205ENST00000469043 ECE1P42892 770 aa5.8□□□□□ -1.48
SCFD1-205ENST00000469043 NEK2P51955 445 aa5.8□□□□□ -1.48
SCFD1-205ENST00000469043 GUCY1A3Q02108 690 aa5.8□□□□□ -1.48
SCFD1-205ENST00000469043 POU5F1BQ06416 359 aa5.8□□□□□ -1.48
SCFD1-205ENST00000469043 LMOD3Q0VAK6 560 aa5.8□□□□□ -1.48
SCFD1-205ENST00000469043 PCOLCEQ15113 449 aa5.8□□□□□ -1.48
SCFD1-205ENST00000469043 FAM47CQ5HY64 1035 aa5.8□□□□□ -1.48
SCFD1-205ENST00000469043 C10orf62Q5T681 223 aaPredicted RBP5.8□□□□□ -1.48
SCFD1-205ENST00000469043 TRIM68Q6AZZ1 485 aa5.8□□□□□ -1.48
SCFD1-205ENST00000469043 RNF180Q86T96 592 aa5.8□□□□□ -1.48
SCFD1-205ENST00000469043 PCDH19Q8TAB3 1148 aa5.8□□□□□ -1.48
SCFD1-205ENST00000469043 ASPSCR1Q9BZE9 553 aa5.8□□□□□ -1.48
SCFD1-205ENST00000469043 TMX4Q9H1E5 349 aaPredicted RBP5.8□□□□□ -1.48
SCFD1-205ENST00000469043 ZNF703Q9H7S9 590 aaPredicted RBP5.8□□□□□ -1.48
SCFD1-205ENST00000469043 Q9UFV3 132 aa5.8□□□□□ -1.48
SCFD1-205ENST00000469043 PCDHA8Q9Y5H6 950 aa5.8□□□□□ -1.48
SCFD1-205ENST00000469043 RPS6KL1Q9Y6S9 549 aa5.8□□□□□ -1.48
SCFD1-205ENST00000469043 CYP27B1O15528 508 aa5.79□□□□□ -1.48
SCFD1-205ENST00000469043 CLASP2O75122 1294 aaKnown RBP5.79□□□□□ -1.48
SCFD1-205ENST00000469043 C4BPAP04003 597 aaKnown RBP5.79□□□□□ -1.48
SCFD1-205ENST00000469043 AMY2AP04746 511 aa5.79□□□□□ -1.48
SCFD1-205ENST00000469043 APPP05067 770 aa5.79□□□□□ -1.48
SCFD1-205ENST00000469043 FAM153BP0C7A2 387 aa5.79□□□□□ -1.48
SCFD1-205ENST00000469043 SRGAP2CP0DJJ0 459 aa5.79□□□□□ -1.48
SCFD1-205ENST00000469043 AMY2BP19961 511 aa5.79□□□□□ -1.48
SCFD1-205ENST00000469043 MRE11P49959 708 aa5.79□□□□□ -1.48
SCFD1-205ENST00000469043 JAM2P57087 298 aa5.79□□□□□ -1.48
SCFD1-205ENST00000469043 PABPC4Q13310 644 aaKnown RBP eCLIP5.79□□□□□ -1.48
SCFD1-205ENST00000469043 SVIPQ8NHG7 77 aa5.79□□□□□ -1.48
SCFD1-205ENST00000469043 ZNF483Q8TF39 744 aaPredicted RBP5.79□□□□□ -1.48
SCFD1-205ENST00000469043 CFHR4Q92496 578 aa5.79□□□□□ -1.48
SCFD1-205ENST00000469043 BTBD7Q9P203 1132 aa5.79□□□□□ -1.48
SCFD1-205ENST00000469043 SWAP70Q9UH65 585 aa5.79□□□□□ -1.48
SCFD1-205ENST00000469043 INTUQ9ULD6 942 aa5.79□□□□□ -1.48
SCFD1-205ENST00000469043 GIT1Q9Y2X7 761 aa5.79□□□□□ -1.48
SCFD1-205ENST00000469043 NPHP1O15259 732 aa5.78□□□□□ -1.48
SCFD1-205ENST00000469043 SUMO1P63165 101 aaKnown RBP5.78□□□□□ -1.48
SCFD1-205ENST00000469043 CD83Q01151 205 aa5.78□□□□□ -1.48
SCFD1-205ENST00000469043 KRTAP1-1Q07627 177 aa5.78□□□□□ -1.48
SCFD1-205ENST00000469043 AMOTL1Q8IY63 956 aa5.78□□□□□ -1.48
SCFD1-205ENST00000469043 D2HGDHQ8N465 521 aa5.78□□□□□ -1.48
SCFD1-205ENST00000469043 AFAP1L2Q8N4X5 818 aa5.78□□□□□ -1.48
SCFD1-205ENST00000469043 PAF1Q8N7H5 531 aa5.78□□□□□ -1.48
SCFD1-205ENST00000469043 SMAD5Q99717 465 aaKnown RBP5.78□□□□□ -1.48
SCFD1-205ENST00000469043 OR10A5Q9H207 317 aa5.78□□□□□ -1.48
SCFD1-205ENST00000469043 MMRN2Q9H8L6 949 aa5.78□□□□□ -1.48
SCFD1-205ENST00000469043 PARPBPQ9NWS1 579 aa5.78□□□□□ -1.48
SCFD1-205ENST00000469043 UCKL1Q9NWZ5 548 aa5.78□□□□□ -1.48
SCFD1-205ENST00000469043 FAM184BQ9ULE4 1060 aa5.78□□□□□ -1.48
SCFD1-205ENST00000469043 CBLCQ9ULV8 474 aa5.78□□□□□ -1.48
SCFD1-205ENST00000469043 TRBV23-1A0A0A0MS06 115 aa5.77□□□□□ -1.49
SCFD1-205ENST00000469043 PMS2P1A4D2B8 440 aa5.77□□□□□ -1.49
SCFD1-205ENST00000469043 GSG1L2A8MUP6 293 aa5.77□□□□□ -1.49
SCFD1-205ENST00000469043 CAPN14A8MX76 684 aa5.77□□□□□ -1.49
SCFD1-205ENST00000469043 ARVCFO00192 962 aa5.77□□□□□ -1.49
SCFD1-205ENST00000469043 PPFIA2O75334 1257 aa5.77□□□□□ -1.49
SCFD1-205ENST00000469043 CPEP16870 476 aa5.77□□□□□ -1.49
SCFD1-205ENST00000469043 MC4RP32245 332 aa5.77□□□□□ -1.49
SCFD1-205ENST00000469043 DNM2P50570 870 aa5.77□□□□□ -1.49
SCFD1-205ENST00000469043 GABREP78334 506 aa5.77□□□□□ -1.49
SCFD1-205ENST00000469043 MOGSQ13724 837 aa5.77□□□□□ -1.49
SCFD1-205ENST00000469043 RAPGEF1Q13905 1077 aa5.77□□□□□ -1.49
SCFD1-205ENST00000469043 ZC3H7AQ8IWR0 971 aaKnown RBP5.77□□□□□ -1.49
SCFD1-205ENST00000469043 GPR135Q8IZ08 494 aa5.77□□□□□ -1.49
SCFD1-205ENST00000469043 SHCBP1Q8NEM2 672 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms