RNA–Protein interactions for RNA: ENST00000468996.2

TGFBR3-205, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-205ENST00000468996 CTC1Q2NKJ3 1217 aa11.91□□□□□ -0.5
TGFBR3-205ENST00000468996 XKR9Q5GH70 373 aa11.91□□□□□ -0.5
TGFBR3-205ENST00000468996 LRRC55Q6ZSA7 311 aa11.91□□□□□ -0.5
TGFBR3-205ENST00000468996 OTUD6AQ7L8S5 288 aa11.91□□□□□ -0.5
TGFBR3-205ENST00000468996 SLFN12Q8IYM2 578 aa11.91□□□□□ -0.5
TGFBR3-205ENST00000468996 COLGALT1Q8NBJ5 622 aa11.91□□□□□ -0.5
TGFBR3-205ENST00000468996 NSUN7Q8NE18 718 aaKnown RBP11.91□□□□□ -0.5
TGFBR3-205ENST00000468996 HELQQ8TDG4 1101 aa11.91□□□□□ -0.5
TGFBR3-205ENST00000468996 PRPF31Q8WWY3 499 aaKnown RBP11.91□□□□□ -0.5
TGFBR3-205ENST00000468996 SLC7A3Q8WY07 619 aa11.91□□□□□ -0.5
TGFBR3-205ENST00000468996 KHSRPQ92945 711 aaKnown RBP eCLIP11.91□□□□□ -0.5
TGFBR3-205ENST00000468996 TMEM143Q96AN5 459 aa11.91□□□□□ -0.5
TGFBR3-205ENST00000468996 DYDC2Q96IM9 177 aa11.91□□□□□ -0.5
TGFBR3-205ENST00000468996 CASD1Q96PB1 797 aa11.91□□□□□ -0.5
TGFBR3-205ENST00000468996 INO80BQ9C086 356 aaPredicted RBP11.91□□□□□ -0.5
TGFBR3-205ENST00000468996 DACT1Q9NYF0 836 aa11.91□□□□□ -0.5
TGFBR3-205ENST00000468996 WRAP73Q9P2S5 460 aaPredicted RBP11.91□□□□□ -0.5
TGFBR3-205ENST00000468996 PUF60Q9UHX1 559 aaKnown RBP11.91□□□□□ -0.5
TGFBR3-205ENST00000468996 PCDHA12Q9UN75 941 aa11.91□□□□□ -0.5
TGFBR3-205ENST00000468996 COL4A6Q14031 1691 aa11.91□□□□□ -0.5
TGFBR3-205ENST00000468996 A0A0U1RQF3 1178 aa11.9□□□□□ -0.5
TGFBR3-205ENST00000468996 EOMESO95936 686 aa11.9□□□□□ -0.5
TGFBR3-205ENST00000468996 LAG3P18627 525 aa11.9□□□□□ -0.5
TGFBR3-205ENST00000468996 YWHABP31946 246 aaKnown RBP11.9□□□□□ -0.5
TGFBR3-205ENST00000468996 PBX3P40426 434 aa11.9□□□□□ -0.5
TGFBR3-205ENST00000468996 TXKP42681 527 aa11.9□□□□□ -0.5
TGFBR3-205ENST00000468996 NDUFV1P49821 464 aa11.9□□□□□ -0.5
TGFBR3-205ENST00000468996 ERVFC1P60507 584 aa11.9□□□□□ -0.5
TGFBR3-205ENST00000468996 GUCY1B3Q02153 619 aa11.9□□□□□ -0.5
TGFBR3-205ENST00000468996 KRT17Q04695 432 aa11.9□□□□□ -0.5
TGFBR3-205ENST00000468996 COL19A1Q14993 1142 aa11.9□□□□□ -0.5
TGFBR3-205ENST00000468996 CALCRLQ16602 461 aa11.9□□□□□ -0.5
TGFBR3-205ENST00000468996 CSPP1Q1MSJ5 1256 aa11.9□□□□□ -0.5
TGFBR3-205ENST00000468996 TWF2Q6IBS0 349 aaKnown RBP11.9□□□□□ -0.5
TGFBR3-205ENST00000468996 KCNT2Q6UVM3 1135 aa11.9□□□□□ -0.5
TGFBR3-205ENST00000468996 CATSPER4Q7RTX7 472 aa11.9□□□□□ -0.5
TGFBR3-205ENST00000468996 ZNF410Q86VK4 478 aa11.9□□□□□ -0.5
TGFBR3-205ENST00000468996 DIS3L2Q8IYB7 885 aaKnown RBP11.9□□□□□ -0.5
TGFBR3-205ENST00000468996 EXOC8Q8IYI6 725 aa11.9□□□□□ -0.5
TGFBR3-205ENST00000468996 TNFRSF25Q93038 417 aa11.9□□□□□ -0.5
TGFBR3-205ENST00000468996 LXNQ9BS40 222 aa11.9□□□□□ -0.5
TGFBR3-205ENST00000468996 CWH43Q9H720 699 aa11.9□□□□□ -0.5
TGFBR3-205ENST00000468996 ZSWIM4Q9H7M6 989 aa11.9□□□□□ -0.5
TGFBR3-205ENST00000468996 TLR9Q9NR96 1032 aa11.9□□□□□ -0.5
TGFBR3-205ENST00000468996 CHST12Q9NRB3 414 aa11.9□□□□□ -0.5
TGFBR3-205ENST00000468996 RNF19AQ9NV58 838 aa11.9□□□□□ -0.5
TGFBR3-205ENST00000468996 RAPGEFL1Q9UHV5 662 aa11.9□□□□□ -0.5
TGFBR3-205ENST00000468996 LIMCH1Q9UPQ0 1083 aa11.9□□□□□ -0.5
TGFBR3-205ENST00000468996 PIN4Q9Y237 131 aaKnown RBP11.9□□□□□ -0.5
TGFBR3-205ENST00000468996 NLRC5Q86WI3 1866 aa11.89□□□□□ -0.51
TGFBR3-205ENST00000468996 A0A087WWV3 80 aa11.89□□□□□ -0.51
TGFBR3-205ENST00000468996 SLITRK3O94933 977 aa11.89□□□□□ -0.51
TGFBR3-205ENST00000468996 UBE3AQ05086 875 aa11.89□□□□□ -0.51
TGFBR3-205ENST00000468996 SAFBQ15424 915 aaKnown RBP eCLIP11.89□□□□□ -0.51
TGFBR3-205ENST00000468996 CLLU1OSQ5K130 101 aa11.89□□□□□ -0.51
TGFBR3-205ENST00000468996 CCDC83Q8IWF9 413 aa11.89□□□□□ -0.51
TGFBR3-205ENST00000468996 C4orf19Q8IY42 314 aa11.89□□□□□ -0.51
TGFBR3-205ENST00000468996 LPPQ93052 612 aa11.89□□□□□ -0.51
TGFBR3-205ENST00000468996 ZNF558Q96NG5 402 aa11.89□□□□□ -0.51
TGFBR3-205ENST00000468996 EIF2AK1Q9BQI3 630 aaKnown RBP11.89□□□□□ -0.51
TGFBR3-205ENST00000468996 TTC12Q9H892 705 aaPredicted RBP11.89□□□□□ -0.51
TGFBR3-205ENST00000468996 CD207Q9UJ71 328 aa11.89□□□□□ -0.51
TGFBR3-205ENST00000468996 COL4A3BPQ9Y5P4 624 aa11.89□□□□□ -0.51
TGFBR3-205ENST00000468996 NT5C1B-RDH14C9J2C7 533 aa11.88□□□□□ -0.51
TGFBR3-205ENST00000468996 MBTPS2O43462 519 aa11.88□□□□□ -0.51
TGFBR3-205ENST00000468996 TBX10O75333 385 aa11.88□□□□□ -0.51
TGFBR3-205ENST00000468996 MCM7P33993 719 aa11.88□□□□□ -0.51
TGFBR3-205ENST00000468996 CA8P35219 290 aa11.88□□□□□ -0.51
TGFBR3-205ENST00000468996 RFC5P40937 340 aa11.88□□□□□ -0.51
TGFBR3-205ENST00000468996 PHKA2P46019 1235 aa11.88□□□□□ -0.51
TGFBR3-205ENST00000468996 ALDH7A1P49419 539 aaKnown RBP11.88□□□□□ -0.51
TGFBR3-205ENST00000468996 SPIRE1Q08AE8 756 aa11.88□□□□□ -0.51
TGFBR3-205ENST00000468996 LAMTOR4Q0VGL1 99 aa11.88□□□□□ -0.51
TGFBR3-205ENST00000468996 PLPP4Q5VZY2 271 aa11.88□□□□□ -0.51
TGFBR3-205ENST00000468996 TMC7Q7Z402 723 aa11.88□□□□□ -0.51
TGFBR3-205ENST00000468996 ZNF598Q86UK7 904 aaKnown RBP11.88□□□□□ -0.51
TGFBR3-205ENST00000468996 LRRC43Q8N309 656 aa11.88□□□□□ -0.51
TGFBR3-205ENST00000468996 EFHBQ8N7U6 833 aa11.88□□□□□ -0.51
TGFBR3-205ENST00000468996 TCP11Q8WWU5 503 aa11.88□□□□□ -0.51
TGFBR3-205ENST00000468996 PSPC1Q8WXF1 523 aaKnown RBP11.88□□□□□ -0.51
TGFBR3-205ENST00000468996 MRPS27Q92552 414 aaKnown RBP11.88□□□□□ -0.51
TGFBR3-205ENST00000468996 TCF25Q9BQ70 676 aa11.88□□□□□ -0.51
TGFBR3-205ENST00000468996 DHX33Q9H6R0 707 aaKnown RBP11.88□□□□□ -0.51
TGFBR3-205ENST00000468996 IFT122Q9HBG6 1241 aa11.88□□□□□ -0.51
TGFBR3-205ENST00000468996 ENTPD7Q9NQZ7 604 aa11.88□□□□□ -0.51
TGFBR3-205ENST00000468996 SPG21Q9NZD8 308 aa11.88□□□□□ -0.51
TGFBR3-205ENST00000468996 BARX2Q9UMQ3 279 aaPredicted RBP11.88□□□□□ -0.51
TGFBR3-205ENST00000468996 INPP5FQ9Y2H2 1132 aa11.88□□□□□ -0.51
TGFBR3-205ENST00000468996 RALGAPA2Q2PPJ7 1873 aa11.88□□□□□ -0.51
TGFBR3-205ENST00000468996 FAM86C2PA6NEL3 165 aa11.87□□□□□ -0.51
TGFBR3-205ENST00000468996 PI4K2BG5E9Z4 385 aa11.87□□□□□ -0.51
TGFBR3-205ENST00000468996 WNT7AO00755 349 aa11.87□□□□□ -0.51
TGFBR3-205ENST00000468996 NEMFO60524 1076 aa11.87□□□□□ -0.51
TGFBR3-205ENST00000468996 SKIP12755 728 aa11.87□□□□□ -0.51
TGFBR3-205ENST00000468996 ATF7P17544 494 aaPredicted RBP11.87□□□□□ -0.51
TGFBR3-205ENST00000468996 RBM10P98175 930 aaKnown RBP11.87□□□□□ -0.51
TGFBR3-205ENST00000468996 PLCB3Q01970 1234 aa11.87□□□□□ -0.51
TGFBR3-205ENST00000468996 RNASELQ05823 741 aaKnown RBP11.87□□□□□ -0.51
TGFBR3-205ENST00000468996 ST3GAL1Q11201 340 aa11.87□□□□□ -0.51
TGFBR3-205ENST00000468996 EMC2Q15006 297 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms