RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 DRP2Q13474 957 aa12.46□□□□□ -0.41
MSH5-214ENST00000468602 BFSP2Q13515 415 aa12.46□□□□□ -0.41
MSH5-214ENST00000468602 TFDP1Q14186 410 aa12.46□□□□□ -0.41
MSH5-214ENST00000468602 BMT2Q1RMZ1 405 aa12.46□□□□□ -0.41
MSH5-214ENST00000468602 LRRC26Q2I0M4 334 aa12.46□□□□□ -0.41
MSH5-214ENST00000468602 PPP4R3CPQ6ZMV5 832 aa12.46□□□□□ -0.41
MSH5-214ENST00000468602 RUFY4Q6ZNE9 571 aa12.46□□□□□ -0.41
MSH5-214ENST00000468602 EPM2AIP1Q7L775 607 aaPredicted RBP12.46□□□□□ -0.41
MSH5-214ENST00000468602 ZNF720Q7Z2F6 126 aa12.46□□□□□ -0.41
MSH5-214ENST00000468602 PRIMPOLQ96LW4 560 aa12.46□□□□□ -0.41
MSH5-214ENST00000468602 SH2D3AQ9BRG2 576 aa12.46□□□□□ -0.41
MSH5-214ENST00000468602 INO80BQ9C086 356 aaPredicted RBP12.46□□□□□ -0.41
MSH5-214ENST00000468602 POLR3FQ9H1D9 316 aaPredicted RBP12.46□□□□□ -0.41
MSH5-214ENST00000468602 PANK4Q9NVE7 773 aa12.46□□□□□ -0.41
MSH5-214ENST00000468602 PCDHA5Q9Y5H7 936 aa12.46□□□□□ -0.41
MSH5-214ENST00000468602 ALPK3Q96L96 1907 aa12.46□□□□□ -0.42
MSH5-214ENST00000468602 SIP14410 1827 aa12.46□□□□□ -0.42
MSH5-214ENST00000468602 UBE4BO95155 1302 aa12.45□□□□□ -0.42
MSH5-214ENST00000468602 TRAK2O60296 914 aa12.45□□□□□ -0.42
MSH5-214ENST00000468602 TBCAO75347 108 aaKnown RBP12.45□□□□□ -0.42
MSH5-214ENST00000468602 PIGRP01833 764 aa12.45□□□□□ -0.42
MSH5-214ENST00000468602 MYCNP04198 464 aaPredicted RBP12.45□□□□□ -0.42
MSH5-214ENST00000468602 RPN1P04843 607 aaKnown RBP12.45□□□□□ -0.42
MSH5-214ENST00000468602 SSBP05455 408 aaKnown RBP eCLIP12.45□□□□□ -0.42
MSH5-214ENST00000468602 PPP1R2P41236 205 aa12.45□□□□□ -0.42
MSH5-214ENST00000468602 NPTX2P47972 431 aa12.45□□□□□ -0.42
MSH5-214ENST00000468602 CLCN3P51790 818 aa12.45□□□□□ -0.42
MSH5-214ENST00000468602 SNRPFP62306 86 aaKnown RBP12.45□□□□□ -0.42
MSH5-214ENST00000468602 IGBP1P78318 339 aa12.45□□□□□ -0.42
MSH5-214ENST00000468602 ASIC1P78348 528 aa12.45□□□□□ -0.42
MSH5-214ENST00000468602 MRPS6P82932 125 aaKnown RBP12.45□□□□□ -0.42
MSH5-214ENST00000468602 COASYQ13057 564 aa12.45□□□□□ -0.42
MSH5-214ENST00000468602 DMP1Q13316 513 aaPredicted RBP12.45□□□□□ -0.42
MSH5-214ENST00000468602 PNOCQ13519 176 aa12.45□□□□□ -0.42
MSH5-214ENST00000468602 CAPSQ13938 189 aa12.45□□□□□ -0.42
MSH5-214ENST00000468602 MORC3Q14149 939 aa12.45□□□□□ -0.42
MSH5-214ENST00000468602 TRIM60Q495X7 471 aa12.45□□□□□ -0.42
MSH5-214ENST00000468602 FAM47CQ5HY64 1035 aa12.45□□□□□ -0.42
MSH5-214ENST00000468602 LRRC71Q8N4P6 559 aa12.45□□□□□ -0.42
MSH5-214ENST00000468602 TMEM161BQ8NDZ6 487 aa12.45□□□□□ -0.42
MSH5-214ENST00000468602 ASAP3Q8TDY4 903 aa12.45□□□□□ -0.42
MSH5-214ENST00000468602 DNAJB3Q8WWF6 145 aa12.45□□□□□ -0.42
MSH5-214ENST00000468602 BSNDQ8WZ55 320 aa12.45□□□□□ -0.42
MSH5-214ENST00000468602 WNT8BQ93098 351 aa12.45□□□□□ -0.42
MSH5-214ENST00000468602 TMEM143Q96AN5 459 aa12.45□□□□□ -0.42
MSH5-214ENST00000468602 IFT74Q96LB3 600 aa12.45□□□□□ -0.42
MSH5-214ENST00000468602 HTATIP2Q9BUP3 242 aa12.45□□□□□ -0.42
MSH5-214ENST00000468602 NOC4LQ9BVI4 516 aaKnown RBP12.45□□□□□ -0.42
MSH5-214ENST00000468602 CELF4Q9BZC1 486 aaKnown RBP12.45□□□□□ -0.42
MSH5-214ENST00000468602 CCDC113Q9H0I3 377 aa12.45□□□□□ -0.42
MSH5-214ENST00000468602 TRPV6Q9H1D0 765 aa12.45□□□□□ -0.42
MSH5-214ENST00000468602 C2orf40Q9H1Z8 148 aa12.45□□□□□ -0.42
MSH5-214ENST00000468602 FZD8Q9H461 694 aa12.45□□□□□ -0.42
MSH5-214ENST00000468602 SUGCTQ9HAC7 445 aa12.45□□□□□ -0.42
MSH5-214ENST00000468602 GPRC5CQ9NQ84 441 aa12.45□□□□□ -0.42
MSH5-214ENST00000468602 TMEM63CQ9P1W3 806 aa12.45□□□□□ -0.42
MSH5-214ENST00000468602 TANC1Q9C0D5 1861 aa12.44□□□□□ -0.42
MSH5-214ENST00000468602 RSPH10B2B2RC85 870 aa12.44□□□□□ -0.42
MSH5-214ENST00000468602 FAM13AO94988 1023 aa12.44□□□□□ -0.42
MSH5-214ENST00000468602 CHRNA1P02708 482 aa12.44□□□□□ -0.42
MSH5-214ENST00000468602 CXCL10P02778 98 aa12.44□□□□□ -0.42
MSH5-214ENST00000468602 CLTBP09497 229 aa12.44□□□□□ -0.42
MSH5-214ENST00000468602 PRR29P0C7W0 189 aa12.44□□□□□ -0.42
MSH5-214ENST00000468602 RSPH10BP0C881 870 aa12.44□□□□□ -0.42
MSH5-214ENST00000468602 CKBP12277 381 aa12.44□□□□□ -0.42
MSH5-214ENST00000468602 DARSP14868 501 aaKnown RBP12.44□□□□□ -0.42
MSH5-214ENST00000468602 SELPP16109 830 aa12.44□□□□□ -0.42
MSH5-214ENST00000468602 RFC2P35250 354 aa12.44□□□□□ -0.42
MSH5-214ENST00000468602 KMT5BQ4FZB7 885 aa12.44□□□□□ -0.42
MSH5-214ENST00000468602 ODR4Q5SWX8 454 aa12.44□□□□□ -0.42
MSH5-214ENST00000468602 FAM102BQ5T8I3 360 aa12.44□□□□□ -0.42
MSH5-214ENST00000468602 ZNF658Q5TYW1 1059 aaPredicted RBP12.44□□□□□ -0.42
MSH5-214ENST00000468602 DYMQ7RTS9 669 aa12.44□□□□□ -0.42
MSH5-214ENST00000468602 GRAMD1CQ8IYS0 662 aa12.44□□□□□ -0.42
MSH5-214ENST00000468602 METTL13Q8N6R0 699 aa12.44□□□□□ -0.42
MSH5-214ENST00000468602 ZNF507Q8TCN5 953 aa12.44□□□□□ -0.42
MSH5-214ENST00000468602 STAMQ92783 540 aa12.44□□□□□ -0.42
MSH5-214ENST00000468602 SMARCE1Q969G3 411 aa12.44□□□□□ -0.42
MSH5-214ENST00000468602 CCDC47Q96A33 483 aaKnown RBP12.44□□□□□ -0.42
MSH5-214ENST00000468602 TRAIPQ9BWF2 469 aa12.44□□□□□ -0.42
MSH5-214ENST00000468602 TRPV2Q9Y5S1 764 aa12.44□□□□□ -0.42
MSH5-214ENST00000468602 ADGRA3Q8IWK6 1321 aa12.43□□□□□ -0.42
MSH5-214ENST00000468602 NPHP3-ACAD11A0A0J9YXS1 232 aa12.43□□□□□ -0.42
MSH5-214ENST00000468602 KRT18P05783 430 aaKnown RBP12.43□□□□□ -0.42
MSH5-214ENST00000468602 EIF4BP23588 611 aaKnown RBP12.43□□□□□ -0.42
MSH5-214ENST00000468602 AXLP30530 894 aa12.43□□□□□ -0.42
MSH5-214ENST00000468602 PHKA2P46019 1235 aa12.43□□□□□ -0.42
MSH5-214ENST00000468602 NLRP11P59045 1033 aaKnown RBP12.43□□□□□ -0.42
MSH5-214ENST00000468602 MCCD1P59942 119 aaPredicted RBP12.43□□□□□ -0.42
MSH5-214ENST00000468602 AMHR2Q16671 573 aa12.43□□□□□ -0.42
MSH5-214ENST00000468602 HERC4Q5GLZ8 1057 aaPredicted RBP12.43□□□□□ -0.42
MSH5-214ENST00000468602 FAM26FQ5R3K3 315 aa12.43□□□□□ -0.42
MSH5-214ENST00000468602 STXBP4Q6ZWJ1 553 aa12.43□□□□□ -0.42
MSH5-214ENST00000468602 TRMT1LQ7Z2T5 733 aaKnown RBP12.43□□□□□ -0.42
MSH5-214ENST00000468602 HAUS6Q7Z4H7 955 aa12.43□□□□□ -0.42
MSH5-214ENST00000468602 SFR1Q86XK3 245 aa12.43□□□□□ -0.42
MSH5-214ENST00000468602 RHPN2Q8IUC4 686 aa12.43□□□□□ -0.42
MSH5-214ENST00000468602 MAP4K3Q8IVH8 894 aa12.43□□□□□ -0.42
MSH5-214ENST00000468602 GUF1Q8N442 669 aaKnown RBP12.43□□□□□ -0.42
MSH5-214ENST00000468602 MYCT1Q8N699 235 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms