RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 SFPQP23246 707 aaKnown RBP eCLIP20.25■□□□□ 0.83
CGREF1-208ENST00000467539 TECP42680 631 aa20.25■□□□□ 0.83
CGREF1-208ENST00000467539 LAMTOR4Q0VGL1 99 aa20.25■□□□□ 0.83
CGREF1-208ENST00000467539 SRGAP1Q7Z6B7 1085 aa20.25■□□□□ 0.83
CGREF1-208ENST00000467539 CATSPER3Q86XQ3 398 aa20.25■□□□□ 0.83
CGREF1-208ENST00000467539 POLR3CQ9BUI4 534 aaPredicted RBP20.25■□□□□ 0.83
CGREF1-208ENST00000467539 TUFT1Q9NNX1 390 aa20.25■□□□□ 0.83
CGREF1-208ENST00000467539 POTEMA6NI47 508 aa20.24■□□□□ 0.83
CGREF1-208ENST00000467539 TBKBP1A7MCY6 615 aa20.24■□□□□ 0.83
CGREF1-208ENST00000467539 HOXA2O43364 376 aa20.24■□□□□ 0.83
CGREF1-208ENST00000467539 OR52Z1P0C646 297 aa20.24■□□□□ 0.83
CGREF1-208ENST00000467539 SRGAP2CP0DJJ0 459 aa20.24■□□□□ 0.83
CGREF1-208ENST00000467539 BMP1P13497 986 aa20.24■□□□□ 0.83
CGREF1-208ENST00000467539 TOB1P50616 345 aaPredicted RBP20.24■□□□□ 0.83
CGREF1-208ENST00000467539 TFF2Q03403 129 aa20.24■□□□□ 0.83
CGREF1-208ENST00000467539 PDIA5Q14554 519 aa20.24■□□□□ 0.83
CGREF1-208ENST00000467539 EMC2Q15006 297 aa20.24■□□□□ 0.83
CGREF1-208ENST00000467539 FERMT3Q86UX7 667 aa20.24■□□□□ 0.83
CGREF1-208ENST00000467539 SPPL3Q8TCT6 385 aa20.24■□□□□ 0.83
CGREF1-208ENST00000467539 PIGOQ8TEQ8 1089 aa20.24■□□□□ 0.83
CGREF1-208ENST00000467539 NLRP4Q96MN2 994 aa20.24■□□□□ 0.83
CGREF1-208ENST00000467539 TMEM117Q9H0C3 514 aa20.24■□□□□ 0.83
CGREF1-208ENST00000467539 TYW1Q9NV66 732 aaKnown RBP20.24■□□□□ 0.83
CGREF1-208ENST00000467539 VCANP13611 3396 aa20.23■□□□□ 0.83
CGREF1-208ENST00000467539 DGAT1O75907 488 aa20.23■□□□□ 0.83
CGREF1-208ENST00000467539 FGFR1P11362 822 aa20.23■□□□□ 0.83
CGREF1-208ENST00000467539 RARRES1P49788 294 aa20.23■□□□□ 0.83
CGREF1-208ENST00000467539 POU5F1BQ06416 359 aa20.23■□□□□ 0.83
CGREF1-208ENST00000467539 MXD4Q14582 209 aaPredicted RBP20.23■□□□□ 0.83
CGREF1-208ENST00000467539 TIGD5Q53EQ6 642 aa20.23■□□□□ 0.83
CGREF1-208ENST00000467539 CATSPER4Q7RTX7 472 aa20.23■□□□□ 0.83
CGREF1-208ENST00000467539 ZNF598Q86UK7 904 aaKnown RBP20.23■□□□□ 0.83
CGREF1-208ENST00000467539 CASD1Q96PB1 797 aa20.23■□□□□ 0.83
CGREF1-208ENST00000467539 NACC1Q96RE7 527 aa20.23■□□□□ 0.83
CGREF1-208ENST00000467539 MTRQ99707 1265 aa20.23■□□□□ 0.83
CGREF1-208ENST00000467539 ALG13Q9NP73 1137 aaKnown RBP20.23■□□□□ 0.83
CGREF1-208ENST00000467539 XPNPEP1Q9NQW7 623 aa20.23■□□□□ 0.83
CGREF1-208ENST00000467539 AAASQ9NRG9 546 aa20.23■□□□□ 0.83
CGREF1-208ENST00000467539 RNF19AQ9NV58 838 aa20.23■□□□□ 0.83
CGREF1-208ENST00000467539 A0A087WWV3 80 aa20.22■□□□□ 0.83
CGREF1-208ENST00000467539 ITGB1P05556 798 aa20.22■□□□□ 0.83
CGREF1-208ENST00000467539 SKIP12755 728 aa20.22■□□□□ 0.83
CGREF1-208ENST00000467539 RPA1P27694 616 aa20.22■□□□□ 0.83
CGREF1-208ENST00000467539 GJB2P29033 226 aa20.22■□□□□ 0.83
CGREF1-208ENST00000467539 FXR2P51116 673 aaKnown RBP eCLIP20.22■□□□□ 0.83
CGREF1-208ENST00000467539 KLHL23Q8NBE8 558 aa20.22■□□□□ 0.83
CGREF1-208ENST00000467539 ERMNQ8TAM6 284 aa20.22■□□□□ 0.83
CGREF1-208ENST00000467539 BACH2Q9BYV9 841 aa20.22■□□□□ 0.83
CGREF1-208ENST00000467539 NSUN3Q9H649 340 aaKnown RBP20.22■□□□□ 0.83
CGREF1-208ENST00000467539 CWH43Q9H720 699 aa20.22■□□□□ 0.83
CGREF1-208ENST00000467539 DBR1Q9UK59 544 aaKnown RBP20.22■□□□□ 0.83
CGREF1-208ENST00000467539 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.22■□□□□ 0.83
CGREF1-208ENST00000467539 PCDHB12Q9Y5F1 795 aa20.22■□□□□ 0.83
CGREF1-208ENST00000467539 ZNF623O75123 536 aa20.21■□□□□ 0.83
CGREF1-208ENST00000467539 MED24O75448 989 aa20.21■□□□□ 0.83
CGREF1-208ENST00000467539 MUTP22033 750 aa20.21■□□□□ 0.83
CGREF1-208ENST00000467539 ARL2P36404 184 aa20.21■□□□□ 0.83
CGREF1-208ENST00000467539 PHKA2P46019 1235 aa20.21■□□□□ 0.83
CGREF1-208ENST00000467539 PTGDRQ13258 359 aa20.21■□□□□ 0.83
CGREF1-208ENST00000467539 CAMK1Q14012 370 aa20.21■□□□□ 0.83
CGREF1-208ENST00000467539 SPOUT1Q5T280 376 aaKnown RBP20.21■□□□□ 0.83
CGREF1-208ENST00000467539 RNF149Q8NC42 400 aa20.21■□□□□ 0.83
CGREF1-208ENST00000467539 MINDY3Q9H8M7 445 aa20.21■□□□□ 0.83
CGREF1-208ENST00000467539 BMP2KQ9NSY1 1161 aaPredicted RBP20.21■□□□□ 0.83
CGREF1-208ENST00000467539 PCDHB6Q9Y5E3 794 aa20.21■□□□□ 0.83
CGREF1-208ENST00000467539 COL4A4P53420 1690 aaPredicted RBP20.21■□□□□ 0.83
CGREF1-208ENST00000467539 RALGAPA2Q2PPJ7 1873 aa20.21■□□□□ 0.83
CGREF1-208ENST00000467539 XIRP2A4UGR9 3374 aa20.21■□□□□ 0.83
CGREF1-208ENST00000467539 NCK2O43639 380 aa20.2■□□□□ 0.82
CGREF1-208ENST00000467539 PTENP60484 403 aa20.2■□□□□ 0.82
CGREF1-208ENST00000467539 NBR1Q14596 966 aa20.2■□□□□ 0.82
CGREF1-208ENST00000467539 PCBP1Q15365 356 aaKnown RBP eCLIP20.2■□□□□ 0.82
CGREF1-208ENST00000467539 CSPP1Q1MSJ5 1256 aa20.2■□□□□ 0.82
CGREF1-208ENST00000467539 TCEAL5Q5H9L2 206 aa20.2■□□□□ 0.82
CGREF1-208ENST00000467539 TWF2Q6IBS0 349 aaKnown RBP20.2■□□□□ 0.82
CGREF1-208ENST00000467539 LRRC55Q6ZSA7 311 aa20.2■□□□□ 0.82
CGREF1-208ENST00000467539 UBE2ZQ9H832 354 aaPredicted RBP20.2■□□□□ 0.82
CGREF1-208ENST00000467539 SMC3Q9UQE7 1217 aa20.2■□□□□ 0.82
CGREF1-208ENST00000467539 PIN4Q9Y237 131 aaKnown RBP20.2■□□□□ 0.82
CGREF1-208ENST00000467539 STK24Q9Y6E0 443 aa20.2■□□□□ 0.82
CGREF1-208ENST00000467539 NLRC5Q86WI3 1866 aa20.2■□□□□ 0.82
CGREF1-208ENST00000467539 LAD1O00515 517 aa20.19■□□□□ 0.82
CGREF1-208ENST00000467539 ATF7P17544 494 aaPredicted RBP20.19■□□□□ 0.82
CGREF1-208ENST00000467539 DNAJB1P25685 340 aa20.19■□□□□ 0.82
CGREF1-208ENST00000467539 HOXA11P31270 313 aaPredicted RBP20.19■□□□□ 0.82
CGREF1-208ENST00000467539 TFDP1Q14186 410 aa20.19■□□□□ 0.82
CGREF1-208ENST00000467539 COL19A1Q14993 1142 aa20.19■□□□□ 0.82
CGREF1-208ENST00000467539 CLLU1OSQ5K130 101 aa20.19■□□□□ 0.82
CGREF1-208ENST00000467539 MCTP1Q6DN14 999 aa20.19■□□□□ 0.82
CGREF1-208ENST00000467539 IFNLR1Q8IU57 520 aaPredicted RBP20.19■□□□□ 0.82
CGREF1-208ENST00000467539 ABI1Q8IZP0 508 aa20.19■□□□□ 0.82
CGREF1-208ENST00000467539 RNF169Q8NCN4 708 aa20.19■□□□□ 0.82
CGREF1-208ENST00000467539 POF1BQ8WVV4 589 aa20.19■□□□□ 0.82
CGREF1-208ENST00000467539 RSPH1Q8WYR4 309 aa20.19■□□□□ 0.82
CGREF1-208ENST00000467539 CCDC43Q96MW1 224 aaKnown RBP20.19■□□□□ 0.82
CGREF1-208ENST00000467539 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.19■□□□□ 0.82
CGREF1-208ENST00000467539 AGPAT5Q9NUQ2 364 aa20.19■□□□□ 0.82
CGREF1-208ENST00000467539 LRWD1Q9UFC0 647 aa20.19■□□□□ 0.82
CGREF1-208ENST00000467539 TTC28Q96AY4 2481 aa20.19■□□□□ 0.82
CGREF1-208ENST00000467539 H3BQV1 296 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms