RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 ANO1Q5XXA6 986 aa6.6□□□□□ -1.35
PTCD3-207ENST00000467273 ZNF365Q70YC5 407 aa6.6□□□□□ -1.35
PTCD3-207ENST00000467273 MSL3Q8N5Y2 521 aaKnown RBP6.6□□□□□ -1.35
PTCD3-207ENST00000467273 PCSK9Q8NBP7 692 aaKnown RBP6.6□□□□□ -1.35
PTCD3-207ENST00000467273 ZNF384Q8TF68 577 aa6.6□□□□□ -1.35
PTCD3-207ENST00000467273 ASB11Q8WXH4 323 aa6.6□□□□□ -1.35
PTCD3-207ENST00000467273 GLT1D1Q96MS3 346 aa6.6□□□□□ -1.35
PTCD3-207ENST00000467273 RSRP1Q9BUV0 290 aa6.6□□□□□ -1.35
PTCD3-207ENST00000467273 MOV10L1Q9BXT6 1211 aaKnown RBP6.6□□□□□ -1.35
PTCD3-207ENST00000467273 SPATC1LQ9H0A9 340 aa6.6□□□□□ -1.35
PTCD3-207ENST00000467273 NKX2-4Q9H2Z4 354 aa6.6□□□□□ -1.35
PTCD3-207ENST00000467273 DNAJC18Q9H819 358 aa6.6□□□□□ -1.35
PTCD3-207ENST00000467273 SSU72Q9NP77 194 aaKnown RBP6.6□□□□□ -1.35
PTCD3-207ENST00000467273 HDAC5Q9UQL6 1122 aa6.6□□□□□ -1.35
PTCD3-207ENST00000467273 MTCH2Q9Y6C9 303 aa6.6□□□□□ -1.35
PTCD3-207ENST00000467273 USP34Q70CQ2 3546 aa6.59□□□□□ -1.35
PTCD3-207ENST00000467273 PTPRCP08575 1304 aa6.59□□□□□ -1.35
PTCD3-207ENST00000467273 NPIPB6E9PJ23 425 aa6.59□□□□□ -1.35
PTCD3-207ENST00000467273 SLC25A27O95847 323 aa6.59□□□□□ -1.35
PTCD3-207ENST00000467273 PGK1P00558 417 aa6.59□□□□□ -1.35
PTCD3-207ENST00000467273 FGBP02675 491 aa6.59□□□□□ -1.35
PTCD3-207ENST00000467273 GLI1P08151 1106 aa6.59□□□□□ -1.35
PTCD3-207ENST00000467273 PFKMP08237 780 aa6.59□□□□□ -1.35
PTCD3-207ENST00000467273 CELA3AP09093 270 aa6.59□□□□□ -1.35
PTCD3-207ENST00000467273 FCER1AP12319 257 aa6.59□□□□□ -1.35
PTCD3-207ENST00000467273 EXOSC9Q06265 439 aaKnown RBP6.59□□□□□ -1.35
PTCD3-207ENST00000467273 SF3A1Q15459 793 aaKnown RBP6.59□□□□□ -1.35
PTCD3-207ENST00000467273 TATDN1Q6P1N9 297 aa6.59□□□□□ -1.35
PTCD3-207ENST00000467273 SV2BQ7L1I2 683 aa6.59□□□□□ -1.35
PTCD3-207ENST00000467273 RELL1Q8IUW5 271 aa6.59□□□□□ -1.35
PTCD3-207ENST00000467273 RPUSD2Q8IZ73 545 aaKnown RBP6.59□□□□□ -1.35
PTCD3-207ENST00000467273 SLC43A3Q8NBI5 491 aa6.59□□□□□ -1.35
PTCD3-207ENST00000467273 KLHDC9Q8NEP7 349 aa6.59□□□□□ -1.35
PTCD3-207ENST00000467273 KIRREL1Q96J84 757 aa6.59□□□□□ -1.35
PTCD3-207ENST00000467273 DIRC2Q96SL1 478 aa6.59□□□□□ -1.35
PTCD3-207ENST00000467273 KRTAP17-1Q9BYP8 105 aa6.59□□□□□ -1.35
PTCD3-207ENST00000467273 USP44Q9H0E7 712 aa6.59□□□□□ -1.35
PTCD3-207ENST00000467273 TNKS2Q9H2K2 1166 aa6.59□□□□□ -1.35
PTCD3-207ENST00000467273 DISC1Q9NRI5 854 aa6.59□□□□□ -1.35
PTCD3-207ENST00000467273 INPP5FQ9Y2H2 1132 aa6.59□□□□□ -1.35
PTCD3-207ENST00000467273 YBX2Q9Y2T7 364 aaKnown RBP6.59□□□□□ -1.35
PTCD3-207ENST00000467273 CDK5RAP2Q96SN8 1893 aa6.59□□□□□ -1.35
PTCD3-207ENST00000467273 SMCHD1A6NHR9 2005 aa6.59□□□□□ -1.36
PTCD3-207ENST00000467273 CFAP54Q96N23 3096 aa6.58□□□□□ -1.36
PTCD3-207ENST00000467273 FLT1P17948 1338 aa6.58□□□□□ -1.36
PTCD3-207ENST00000467273 SYNRGQ9UMZ2 1314 aa6.58□□□□□ -1.36
PTCD3-207ENST00000467273 A0A0U1RQG5 324 aaPredicted RBP6.58□□□□□ -1.36
PTCD3-207ENST00000467273 MINDY4BA8MYZ0 360 aa6.58□□□□□ -1.36
PTCD3-207ENST00000467273 ARVCFO00192 962 aa6.58□□□□□ -1.36
PTCD3-207ENST00000467273 DUSP11O75319 330 aaKnown RBP6.58□□□□□ -1.36
PTCD3-207ENST00000467273 GH2P01242 217 aa6.58□□□□□ -1.36
PTCD3-207ENST00000467273 GBP2P32456 591 aaPredicted RBP6.58□□□□□ -1.36
PTCD3-207ENST00000467273 COPB2P35606 906 aa6.58□□□□□ -1.36
PTCD3-207ENST00000467273 PRAMEF19Q5SWL8 479 aa6.58□□□□□ -1.36
PTCD3-207ENST00000467273 CCSAPQ6IQ19 270 aaPredicted RBP6.58□□□□□ -1.36
PTCD3-207ENST00000467273 FAM126BQ8IXS8 530 aa6.58□□□□□ -1.36
PTCD3-207ENST00000467273 SPATA5Q8NB90 893 aa6.58□□□□□ -1.36
PTCD3-207ENST00000467273 TANGO6Q9C0B7 1094 aa6.58□□□□□ -1.36
PTCD3-207ENST00000467273 RPAP3Q9H6T3 665 aaPredicted RBP6.58□□□□□ -1.36
PTCD3-207ENST00000467273 PRKRIP1Q9H875 184 aaPredicted RBP6.58□□□□□ -1.36
PTCD3-207ENST00000467273 SPC25Q9HBM1 224 aa6.58□□□□□ -1.36
PTCD3-207ENST00000467273 PCOLCE2Q9UKZ9 415 aa6.58□□□□□ -1.36
PTCD3-207ENST00000467273 CNPY2Q9Y2B0 182 aa6.58□□□□□ -1.36
PTCD3-207ENST00000467273 SNX11Q9Y5W9 270 aa6.58□□□□□ -1.36
PTCD3-207ENST00000467273 SLC4A7Q9Y6M7 1214 aa6.58□□□□□ -1.36
PTCD3-207ENST00000467273 PRRC2BQ5JSZ5 2229 aaKnown RBP6.57□□□□□ -1.36
PTCD3-207ENST00000467273 ZNFX1Q9P2E3 1918 aaKnown RBP6.57□□□□□ -1.36
PTCD3-207ENST00000467273 FAM86C2PA6NEL3 165 aa6.57□□□□□ -1.36
PTCD3-207ENST00000467273 ENC1O14682 589 aa6.57□□□□□ -1.36
PTCD3-207ENST00000467273 CD4P01730 458 aa6.57□□□□□ -1.36
PTCD3-207ENST00000467273 DNAJA1P31689 397 aaKnown RBP6.57□□□□□ -1.36
PTCD3-207ENST00000467273 NKX3-2P78367 333 aa6.57□□□□□ -1.36
PTCD3-207ENST00000467273 PAK2Q13177 524 aa6.57□□□□□ -1.36
PTCD3-207ENST00000467273 GNL2Q13823 731 aaKnown RBP6.57□□□□□ -1.36
PTCD3-207ENST00000467273 KCNA10Q16322 511 aa6.57□□□□□ -1.36
PTCD3-207ENST00000467273 TMEM67Q5HYA8 995 aa6.57□□□□□ -1.36
PTCD3-207ENST00000467273 TMED8Q6PL24 325 aaPredicted RBP6.57□□□□□ -1.36
PTCD3-207ENST00000467273 SH3RF3Q8TEJ3 882 aaPredicted RBP6.57□□□□□ -1.36
PTCD3-207ENST00000467273 PKNOX2Q96KN3 472 aa6.57□□□□□ -1.36
PTCD3-207ENST00000467273 TMEM74Q96NL1 305 aa6.57□□□□□ -1.36
PTCD3-207ENST00000467273 PRRX2Q99811 253 aa6.57□□□□□ -1.36
PTCD3-207ENST00000467273 CEP44Q9C0F1 390 aa6.57□□□□□ -1.36
PTCD3-207ENST00000467273 NSUN3Q9H649 340 aaKnown RBP6.57□□□□□ -1.36
PTCD3-207ENST00000467273 CABP5Q9NP86 173 aa6.57□□□□□ -1.36
PTCD3-207ENST00000467273 HMG20BQ9P0W2 317 aa6.57□□□□□ -1.36
PTCD3-207ENST00000467273 ADAMTS1Q9UHI8 967 aa6.57□□□□□ -1.36
PTCD3-207ENST00000467273 SERPINB13Q9UIV8 391 aa6.57□□□□□ -1.36
PTCD3-207ENST00000467273 FAM184BQ9ULE4 1060 aa6.57□□□□□ -1.36
PTCD3-207ENST00000467273 PALD1Q9ULE6 856 aa6.57□□□□□ -1.36
PTCD3-207ENST00000467273 A0A1B0GUL7 405 aa6.56□□□□□ -1.36
PTCD3-207ENST00000467273 ZNF862O60290 1169 aa6.56□□□□□ -1.36
PTCD3-207ENST00000467273 PAGE1O75459 146 aa6.56□□□□□ -1.36
PTCD3-207ENST00000467273 CABYRO75952 493 aa6.56□□□□□ -1.36
PTCD3-207ENST00000467273 KRT1P04264 644 aa6.56□□□□□ -1.36
PTCD3-207ENST00000467273 ASGR1P07306 291 aa6.56□□□□□ -1.36
PTCD3-207ENST00000467273 UQCRFS1P1P0C7P4 283 aa6.56□□□□□ -1.36
PTCD3-207ENST00000467273 ACRP10323 421 aa6.56□□□□□ -1.36
PTCD3-207ENST00000467273 ATP2A2P16615 1042 aaKnown RBP6.56□□□□□ -1.36
PTCD3-207ENST00000467273 ADORA1P30542 326 aa6.56□□□□□ -1.36
PTCD3-207ENST00000467273 LIG3P49916 1009 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms