RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 LOXL4Q96JB6 756 aa14.59□□□□□ -0.07
UBR4-210ENST00000466969 RNF19AQ9NV58 838 aa14.59□□□□□ -0.07
UBR4-210ENST00000466969 MAP3K20Q9NYL2 800 aaKnown RBP14.59□□□□□ -0.07
UBR4-210ENST00000466969 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.59□□□□□ -0.07
UBR4-210ENST00000466969 TELO2Q9Y4R8 837 aa14.59□□□□□ -0.07
UBR4-210ENST00000466969 PCDHA2Q9Y5H9 948 aa14.59□□□□□ -0.07
UBR4-210ENST00000466969 TENM4Q6N022 2769 aa14.59□□□□□ -0.07
UBR4-210ENST00000466969 HECTD1Q9ULT8 2610 aa14.59□□□□□ -0.07
UBR4-210ENST00000466969 ZC3H11AO75152 810 aaKnown RBP eCLIP14.58□□□□□ -0.08
UBR4-210ENST00000466969 GOLGA8HP0CJ92 632 aa14.58□□□□□ -0.08
UBR4-210ENST00000466969 INSRRP14616 1297 aa14.58□□□□□ -0.08
UBR4-210ENST00000466969 ZNF605Q86T29 641 aa14.58□□□□□ -0.08
UBR4-210ENST00000466969 IGSF21Q96ID5 467 aa14.58□□□□□ -0.08
UBR4-210ENST00000466969 LRIG1Q96JA1 1093 aa14.58□□□□□ -0.08
UBR4-210ENST00000466969 CPVLQ9H3G5 476 aa14.58□□□□□ -0.08
UBR4-210ENST00000466969 NDRG2Q9UN36 371 aaKnown RBP14.58□□□□□ -0.08
UBR4-210ENST00000466969 DOCK5Q9H7D0 1870 aa14.57□□□□□ -0.08
UBR4-210ENST00000466969 SPATA31C2B4DYI2 1134 aa14.57□□□□□ -0.08
UBR4-210ENST00000466969 FIBPO43427 364 aa14.57□□□□□ -0.08
UBR4-210ENST00000466969 RFPL2O75678 378 aa14.57□□□□□ -0.08
UBR4-210ENST00000466969 MYBP10242 640 aa14.57□□□□□ -0.08
UBR4-210ENST00000466969 TRIM27P14373 513 aa14.57□□□□□ -0.08
UBR4-210ENST00000466969 TMEM173Q86WV6 379 aaPredicted RBP14.57□□□□□ -0.08
UBR4-210ENST00000466969 HNRNPLLQ8WVV9 542 aaKnown RBP14.57□□□□□ -0.08
UBR4-210ENST00000466969 EDEM2Q9BV94 578 aa14.57□□□□□ -0.08
UBR4-210ENST00000466969 SMARCAD1Q9H4L7 1026 aa14.57□□□□□ -0.08
UBR4-210ENST00000466969 STK39Q9UEW8 545 aa14.57□□□□□ -0.08
UBR4-210ENST00000466969 KLK13Q9UKR3 277 aa14.57□□□□□ -0.08
UBR4-210ENST00000466969 RAI2Q9Y5P3 530 aa14.57□□□□□ -0.08
UBR4-210ENST00000466969 ASXL3Q9C0F0 2248 aa14.57□□□□□ -0.08
UBR4-210ENST00000466969 LAMA1P25391 3075 aa14.56□□□□□ -0.08
UBR4-210ENST00000466969 SMIM35A0A1B0GVV1 85 aa14.56□□□□□ -0.08
UBR4-210ENST00000466969 C4orf47A7E2U8 309 aa14.56□□□□□ -0.08
UBR4-210ENST00000466969 DHX16O60231 1041 aaKnown RBP14.56□□□□□ -0.08
UBR4-210ENST00000466969 STAM2O75886 525 aa14.56□□□□□ -0.08
UBR4-210ENST00000466969 EPN2O95208 641 aa14.56□□□□□ -0.08
UBR4-210ENST00000466969 PRB1P04280 392 aa14.56□□□□□ -0.08
UBR4-210ENST00000466969 SSBP05455 408 aaKnown RBP eCLIP14.56□□□□□ -0.08
UBR4-210ENST00000466969 SNHG28P0DPA3 235 aa14.56□□□□□ -0.08
UBR4-210ENST00000466969 SATB1Q01826 763 aa14.56□□□□□ -0.08
UBR4-210ENST00000466969 QRICH1Q2TAL8 776 aa14.56□□□□□ -0.08
UBR4-210ENST00000466969 CLLU1OSQ5K130 101 aa14.56□□□□□ -0.08
UBR4-210ENST00000466969 HEATR6Q6AI08 1181 aaKnown RBP14.56□□□□□ -0.08
UBR4-210ENST00000466969 GIMAP8Q8ND71 665 aaPredicted RBP14.56□□□□□ -0.08
UBR4-210ENST00000466969 HELQQ8TDG4 1101 aa14.56□□□□□ -0.08
UBR4-210ENST00000466969 TMEM40Q8WWA1 233 aa14.56□□□□□ -0.08
UBR4-210ENST00000466969 KIF1BPQ96EK5 621 aa14.56□□□□□ -0.08
UBR4-210ENST00000466969 MRPL17Q9NRX2 175 aaKnown RBP14.56□□□□□ -0.08
UBR4-210ENST00000466969 TOMM22Q9NS69 142 aa14.56□□□□□ -0.08
UBR4-210ENST00000466969 MAN2B1O00754 1011 aa14.55□□□□□ -0.08
UBR4-210ENST00000466969 ARHGAP6O43182 974 aa14.55□□□□□ -0.08
UBR4-210ENST00000466969 GLUD1P00367 558 aa14.55□□□□□ -0.08
UBR4-210ENST00000466969 ADH1AP07327 375 aa14.55□□□□□ -0.08
UBR4-210ENST00000466969 ZSCAN20P17040 1043 aaPredicted RBP14.55□□□□□ -0.08
UBR4-210ENST00000466969 CSRP1P21291 193 aaKnown RBP14.55□□□□□ -0.08
UBR4-210ENST00000466969 FSHRP23945 695 aa14.55□□□□□ -0.08
UBR4-210ENST00000466969 HOXA13P31271 388 aaPredicted RBP14.55□□□□□ -0.08
UBR4-210ENST00000466969 GHRHRQ02643 423 aa14.55□□□□□ -0.08
UBR4-210ENST00000466969 CTDSPL2Q05D32 466 aa14.55□□□□□ -0.08
UBR4-210ENST00000466969 ADGRF4Q8IZF3 695 aa14.55□□□□□ -0.08
UBR4-210ENST00000466969 SEPT1Q8WYJ6 367 aa14.55□□□□□ -0.08
UBR4-210ENST00000466969 ZNF707Q96C28 371 aaPredicted RBP14.55□□□□□ -0.08
UBR4-210ENST00000466969 INPP4AQ96PE3 977 aaPredicted RBP14.55□□□□□ -0.08
UBR4-210ENST00000466969 SENP7Q9BQF6 1050 aa14.55□□□□□ -0.08
UBR4-210ENST00000466969 PHF20Q9BVI0 1012 aa14.55□□□□□ -0.08
UBR4-210ENST00000466969 SMOC1Q9H4F8 434 aa14.55□□□□□ -0.08
UBR4-210ENST00000466969 HEBP1Q9NRV9 189 aa14.55□□□□□ -0.08
UBR4-210ENST00000466969 VPS45Q9NRW7 570 aa14.55□□□□□ -0.08
UBR4-210ENST00000466969 CDH7Q9ULB5 785 aa14.55□□□□□ -0.08
UBR4-210ENST00000466969 TICRRQ7Z2Z1 1910 aa14.54□□□□□ -0.08
UBR4-210ENST00000466969 SEMA3FQ13275 785 aa14.54□□□□□ -0.08
UBR4-210ENST00000466969 PLA2G2CQ5R387 149 aa14.54□□□□□ -0.08
UBR4-210ENST00000466969 FCHSD1Q86WN1 690 aa14.54□□□□□ -0.08
UBR4-210ENST00000466969 ECHDC2Q86YB7 292 aa14.54□□□□□ -0.08
UBR4-210ENST00000466969 NT5C3AQ9H0P0 336 aa14.54□□□□□ -0.08
UBR4-210ENST00000466969 ADAMTS10Q9H324 1103 aa14.54□□□□□ -0.08
UBR4-210ENST00000466969 LMAN1LQ9HAT1 526 aa14.54□□□□□ -0.08
UBR4-210ENST00000466969 CDHR5Q9HBB8 845 aa14.54□□□□□ -0.08
UBR4-210ENST00000466969 RTEL1Q9NZ71 1219 aa14.54□□□□□ -0.08
UBR4-210ENST00000466969 TNNQ9UQP3 1299 aa14.54□□□□□ -0.08
UBR4-210ENST00000466969 PCDHGA5Q9Y5G8 931 aa14.54□□□□□ -0.08
UBR4-210ENST00000466969 SPTA1P02549 2419 aa14.53□□□□□ -0.08
UBR4-210ENST00000466969 M0R2C6 588 aa14.53□□□□□ -0.08
UBR4-210ENST00000466969 MAP3K13O43283 966 aa14.53□□□□□ -0.08
UBR4-210ENST00000466969 LILRB3O75022 631 aa14.53□□□□□ -0.08
UBR4-210ENST00000466969 MPLP40238 635 aa14.53□□□□□ -0.08
UBR4-210ENST00000466969 DSC3Q14574 896 aa14.53□□□□□ -0.08
UBR4-210ENST00000466969 PLCB4Q15147 1175 aa14.53□□□□□ -0.08
UBR4-210ENST00000466969 FAM228AQ86W67 206 aa14.53□□□□□ -0.08
UBR4-210ENST00000466969 TMEM57Q8N5G2 664 aa14.53□□□□□ -0.08
UBR4-210ENST00000466969 SAMD3Q8N6K7 520 aa14.53□□□□□ -0.08
UBR4-210ENST00000466969 TRAPPC12Q8WVT3 735 aa14.53□□□□□ -0.08
UBR4-210ENST00000466969 FRAT1Q92837 279 aaPredicted RBP14.53□□□□□ -0.08
UBR4-210ENST00000466969 KXD1Q9BQD3 176 aa14.53□□□□□ -0.08
UBR4-210ENST00000466969 MYH6P13533 1939 aa14.53□□□□□ -0.08
UBR4-210ENST00000466969 ZNF462Q96JM2 2506 aa14.52□□□□□ -0.08
UBR4-210ENST00000466969 CELSR3Q9NYQ7 3312 aa14.52□□□□□ -0.08
UBR4-210ENST00000466969 C2CD2LO14523 706 aa14.52□□□□□ -0.09
UBR4-210ENST00000466969 OPLAHO14841 1288 aa14.52□□□□□ -0.09
UBR4-210ENST00000466969 RNF113AO15541 343 aaKnown RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms