RNA–Protein interactions for RNA: ENST00000466829.5

COL16A1-207, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 254 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-207ENST00000466829 EXOC8Q8IYI6 725 aa17.86■□□□□ 0.45
COL16A1-207ENST00000466829 RNF169Q8NCN4 708 aa17.86■□□□□ 0.45
COL16A1-207ENST00000466829 LEO1Q8WVC0 666 aaPredicted RBP17.86■□□□□ 0.45
COL16A1-207ENST00000466829 CLP1Q92989 425 aaKnown RBP17.86■□□□□ 0.45
COL16A1-207ENST00000466829 NLRP4Q96MN2 994 aa17.86■□□□□ 0.45
COL16A1-207ENST00000466829 CCDC43Q96MW1 224 aaKnown RBP17.86■□□□□ 0.45
COL16A1-207ENST00000466829 ZSWIM4Q9H7M6 989 aa17.86■□□□□ 0.45
COL16A1-207ENST00000466829 C9IYK1 514 aa17.85■□□□□ 0.45
COL16A1-207ENST00000466829 C5orf67F2Z3F1 127 aa17.85■□□□□ 0.45
COL16A1-207ENST00000466829 MAFO75444 373 aaPredicted RBP17.85■□□□□ 0.45
COL16A1-207ENST00000466829 CSDE1O75534 798 aaKnown RBP17.85■□□□□ 0.45
COL16A1-207ENST00000466829 SIP14410 1827 aa17.85■□□□□ 0.45
COL16A1-207ENST00000466829 YWHABP31946 246 aaKnown RBP17.85■□□□□ 0.45
COL16A1-207ENST00000466829 MCM7P33993 719 aa17.85■□□□□ 0.45
COL16A1-207ENST00000466829 KCNQ1P51787 676 aa17.85■□□□□ 0.45
COL16A1-207ENST00000466829 ABI1Q8IZP0 508 aa17.85■□□□□ 0.45
COL16A1-207ENST00000466829 UHRF1Q96T88 793 aaPredicted RBP17.85■□□□□ 0.45
COL16A1-207ENST00000466829 PLVAPQ9BX97 442 aa17.85■□□□□ 0.45
COL16A1-207ENST00000466829 TTC12Q9H892 705 aaPredicted RBP17.85■□□□□ 0.45
COL16A1-207ENST00000466829 RC3H2Q9HBD1 1191 aaKnown RBP17.85■□□□□ 0.45
COL16A1-207ENST00000466829 GDPD2Q9HCC8 539 aa17.85■□□□□ 0.45
COL16A1-207ENST00000466829 ALG13Q9NP73 1137 aaKnown RBP17.85■□□□□ 0.45
COL16A1-207ENST00000466829 BMP2KQ9NSY1 1161 aaPredicted RBP17.85■□□□□ 0.45
COL16A1-207ENST00000466829 A0A087WZ62 844 aa17.84■□□□□ 0.45
COL16A1-207ENST00000466829 GRM6O15303 877 aa17.84■□□□□ 0.45
COL16A1-207ENST00000466829 YEATS4O95619 227 aa17.84■□□□□ 0.45
COL16A1-207ENST00000466829 FGFR1P11362 822 aa17.84■□□□□ 0.45
COL16A1-207ENST00000466829 RILPL1Q5EBL4 403 aa17.84■□□□□ 0.45
COL16A1-207ENST00000466829 XKR9Q5GH70 373 aa17.84■□□□□ 0.45
COL16A1-207ENST00000466829 FAM102BQ5T8I3 360 aa17.84■□□□□ 0.45
COL16A1-207ENST00000466829 C4orf19Q8IY42 314 aa17.84■□□□□ 0.45
COL16A1-207ENST00000466829 CRIPAKQ8N1N5 446 aa17.84■□□□□ 0.45
COL16A1-207ENST00000466829 USP28Q96RU2 1077 aa17.84■□□□□ 0.45
COL16A1-207ENST00000466829 EIF2AK1Q9BQI3 630 aaKnown RBP17.84■□□□□ 0.45
COL16A1-207ENST00000466829 FDXACB1Q9BRP7 624 aaPredicted RBP17.84■□□□□ 0.45
COL16A1-207ENST00000466829 INO80BQ9C086 356 aaPredicted RBP17.84■□□□□ 0.45
COL16A1-207ENST00000466829 NSUN3Q9H649 340 aaKnown RBP17.84■□□□□ 0.45
COL16A1-207ENST00000466829 AAASQ9NRG9 546 aa17.84■□□□□ 0.45
COL16A1-207ENST00000466829 TMEM161AQ9NX61 479 aa17.84■□□□□ 0.45
COL16A1-207ENST00000466829 WRAP73Q9P2S5 460 aaPredicted RBP17.84■□□□□ 0.45
COL16A1-207ENST00000466829 TRANK1O15050 2925 aa17.84■□□□□ 0.45
COL16A1-207ENST00000466829 EVPLQ92817 2033 aa17.83■□□□□ 0.45
COL16A1-207ENST00000466829 IGKV6-21A0A0C4DH24 114 aa17.83■□□□□ 0.44
COL16A1-207ENST00000466829 KCNA5P22460 613 aa17.83■□□□□ 0.44
COL16A1-207ENST00000466829 SFPQP23246 707 aaKnown RBP eCLIP17.83■□□□□ 0.44
COL16A1-207ENST00000466829 RFC5P40937 340 aa17.83■□□□□ 0.44
COL16A1-207ENST00000466829 NASPP49321 788 aaPredicted RBP17.83■□□□□ 0.44
COL16A1-207ENST00000466829 DSC3Q14574 896 aa17.83■□□□□ 0.44
COL16A1-207ENST00000466829 TCEAL5Q5H9L2 206 aa17.83■□□□□ 0.44
COL16A1-207ENST00000466829 ZNF410Q86VK4 478 aa17.83■□□□□ 0.44
COL16A1-207ENST00000466829 KSR1Q8IVT5 923 aa17.83■□□□□ 0.44
COL16A1-207ENST00000466829 ZNF579Q8NAF0 562 aaKnown RBP17.83■□□□□ 0.44
COL16A1-207ENST00000466829 TMEM143Q96AN5 459 aa17.83■□□□□ 0.44
COL16A1-207ENST00000466829 CEP89Q96ST8 783 aa17.83■□□□□ 0.44
COL16A1-207ENST00000466829 LMAN2LQ9H0V9 348 aa17.83■□□□□ 0.44
COL16A1-207ENST00000466829 UBE2ZQ9H832 354 aaPredicted RBP17.83■□□□□ 0.44
COL16A1-207ENST00000466829 DACT1Q9NYF0 836 aa17.83■□□□□ 0.44
COL16A1-207ENST00000466829 PPME1Q9Y570 386 aa17.83■□□□□ 0.44
COL16A1-207ENST00000466829 PCDHB12Q9Y5F1 795 aa17.83■□□□□ 0.44
COL16A1-207ENST00000466829 COL4A4P53420 1690 aaPredicted RBP17.83■□□□□ 0.44
COL16A1-207ENST00000466829 TTC3P53804 2025 aa17.82■□□□□ 0.44
COL16A1-207ENST00000466829 CUL9Q8IWT3 2517 aa17.82■□□□□ 0.44
COL16A1-207ENST00000466829 TCHHQ07283 1943 aa17.82■□□□□ 0.44
COL16A1-207ENST00000466829 TNFRSF10AO00220 468 aa17.82■□□□□ 0.44
COL16A1-207ENST00000466829 HOXA2O43364 376 aa17.82■□□□□ 0.44
COL16A1-207ENST00000466829 LINC00271P0C7V0 271 aa17.82■□□□□ 0.44
COL16A1-207ENST00000466829 SRGAP2CP0DJJ0 459 aa17.82■□□□□ 0.44
COL16A1-207ENST00000466829 FAM189BP81408 668 aa17.82■□□□□ 0.44
COL16A1-207ENST00000466829 SPIRE1Q08AE8 756 aa17.82■□□□□ 0.44
COL16A1-207ENST00000466829 ZNF174Q15697 407 aa17.82■□□□□ 0.44
COL16A1-207ENST00000466829 CATSPER4Q7RTX7 472 aa17.82■□□□□ 0.44
COL16A1-207ENST00000466829 KLHL23Q8NBE8 558 aa17.82■□□□□ 0.44
COL16A1-207ENST00000466829 GPT2Q8TD30 523 aa17.82■□□□□ 0.44
COL16A1-207ENST00000466829 KCNG4Q8TDN1 519 aa17.82■□□□□ 0.44
COL16A1-207ENST00000466829 PSPC1Q8WXF1 523 aaKnown RBP17.82■□□□□ 0.44
COL16A1-207ENST00000466829 ELAC1Q9H777 363 aaKnown RBP17.82■□□□□ 0.44
COL16A1-207ENST00000466829 PLAGL2Q9UPG8 496 aa17.82■□□□□ 0.44
COL16A1-207ENST00000466829 COL4A3BPQ9Y5P4 624 aa17.82■□□□□ 0.44
COL16A1-207ENST00000466829 COL4A6Q14031 1691 aa17.82■□□□□ 0.44
COL16A1-207ENST00000466829 VCANP13611 3396 aa17.81■□□□□ 0.44
COL16A1-207ENST00000466829 GOLGA6L4A6NEF3 574 aa17.81■□□□□ 0.44
COL16A1-207ENST00000466829 WNT7AO00755 349 aa17.81■□□□□ 0.44
COL16A1-207ENST00000466829 ZBTB39O15060 712 aa17.81■□□□□ 0.44
COL16A1-207ENST00000466829 GADD45BO75293 160 aaPredicted RBP17.81■□□□□ 0.44
COL16A1-207ENST00000466829 SLITRK3O94933 977 aa17.81■□□□□ 0.44
COL16A1-207ENST00000466829 BMP1P13497 986 aa17.81■□□□□ 0.44
COL16A1-207ENST00000466829 NAALADL2Q58DX5 795 aa17.81■□□□□ 0.44
COL16A1-207ENST00000466829 TWF2Q6IBS0 349 aaKnown RBP17.81■□□□□ 0.44
COL16A1-207ENST00000466829 ECHDC2Q86YB7 292 aa17.81■□□□□ 0.44
COL16A1-207ENST00000466829 LINC00301Q8NCQ3 95 aa17.81■□□□□ 0.44
COL16A1-207ENST00000466829 MICAL1Q8TDZ2 1067 aa17.81■□□□□ 0.44
COL16A1-207ENST00000466829 TCP11Q8WWU5 503 aa17.81■□□□□ 0.44
COL16A1-207ENST00000466829 PRPF31Q8WWY3 499 aaKnown RBP17.81■□□□□ 0.44
COL16A1-207ENST00000466829 P2RX5Q93086 422 aa17.81■□□□□ 0.44
COL16A1-207ENST00000466829 IGFLR1Q9H665 355 aa17.81■□□□□ 0.44
COL16A1-207ENST00000466829 TYW1Q9NV66 732 aaKnown RBP17.81■□□□□ 0.44
COL16A1-207ENST00000466829 NOL7Q9UMY1 257 aaKnown RBP17.81■□□□□ 0.44
COL16A1-207ENST00000466829 PIN4Q9Y237 131 aaKnown RBP17.81■□□□□ 0.44
COL16A1-207ENST00000466829 GAS2O43903 313 aaKnown RBP17.8■□□□□ 0.44
COL16A1-207ENST00000466829 ITGB1P05556 798 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms