RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 FDXACB1Q9BRP7 624 aaPredicted RBP19.62■□□□□ 0.73
COL7A1-206ENST00000466591 LRFN3Q9BTN0 628 aa19.62■□□□□ 0.73
COL7A1-206ENST00000466591 CYP26B1Q9NR63 512 aa19.62■□□□□ 0.73
COL7A1-206ENST00000466591 CHST12Q9NRB3 414 aa19.62■□□□□ 0.73
COL7A1-206ENST00000466591 GJB4Q9NTQ9 266 aa19.62■□□□□ 0.73
COL7A1-206ENST00000466591 HCSTQ9UBK5 93 aa19.62■□□□□ 0.73
COL7A1-206ENST00000466591 RAPGEFL1Q9UHV5 662 aa19.62■□□□□ 0.73
COL7A1-206ENST00000466591 PI4K2BG5E9Z4 385 aa19.61■□□□□ 0.73
COL7A1-206ENST00000466591 PER2O15055 1255 aa19.61■□□□□ 0.73
COL7A1-206ENST00000466591 TBX3O15119 743 aa19.61■□□□□ 0.73
COL7A1-206ENST00000466591 MAFO75444 373 aaPredicted RBP19.61■□□□□ 0.73
COL7A1-206ENST00000466591 EOMESO95936 686 aa19.61■□□□□ 0.73
COL7A1-206ENST00000466591 ALDH7A1P49419 539 aaKnown RBP19.61■□□□□ 0.73
COL7A1-206ENST00000466591 NEK4P51957 841 aa19.61■□□□□ 0.73
COL7A1-206ENST00000466591 RNASELQ05823 741 aaKnown RBP19.61■□□□□ 0.73
COL7A1-206ENST00000466591 ZP2Q05996 745 aa19.61■□□□□ 0.73
COL7A1-206ENST00000466591 CAMK1Q14012 370 aa19.61■□□□□ 0.73
COL7A1-206ENST00000466591 NPY5RQ15761 445 aa19.61■□□□□ 0.73
COL7A1-206ENST00000466591 SMAD2Q15796 467 aaKnown RBP19.61■□□□□ 0.73
COL7A1-206ENST00000466591 KCNT2Q6UVM3 1135 aa19.61■□□□□ 0.73
COL7A1-206ENST00000466591 POTEDQ86YR6 584 aa19.61■□□□□ 0.73
COL7A1-206ENST00000466591 OXER1Q8TDS5 423 aa19.61■□□□□ 0.73
COL7A1-206ENST00000466591 BMP2KQ9NSY1 1161 aaPredicted RBP19.61■□□□□ 0.73
COL7A1-206ENST00000466591 PCDHGC5Q9Y5F6 944 aa19.61■□□□□ 0.73
COL7A1-206ENST00000466591 A0A0U1RQF3 1178 aa19.6■□□□□ 0.73
COL7A1-206ENST00000466591 DCXO43602 365 aa19.6■□□□□ 0.73
COL7A1-206ENST00000466591 SAFBQ15424 915 aaKnown RBP eCLIP19.6■□□□□ 0.73
COL7A1-206ENST00000466591 XKR9Q5GH70 373 aa19.6■□□□□ 0.73
COL7A1-206ENST00000466591 GLB1LQ6UWU2 654 aa19.6■□□□□ 0.73
COL7A1-206ENST00000466591 ANO5Q75V66 913 aa19.6■□□□□ 0.73
COL7A1-206ENST00000466591 TMC7Q7Z402 723 aa19.6■□□□□ 0.73
COL7A1-206ENST00000466591 TCP11Q8WWU5 503 aa19.6■□□□□ 0.73
COL7A1-206ENST00000466591 PSPC1Q8WXF1 523 aaKnown RBP19.6■□□□□ 0.73
COL7A1-206ENST00000466591 MRPS27Q92552 414 aaKnown RBP19.6■□□□□ 0.73
COL7A1-206ENST00000466591 FAM122AQ96E09 287 aa19.6■□□□□ 0.73
COL7A1-206ENST00000466591 CASD1Q96PB1 797 aa19.6■□□□□ 0.73
COL7A1-206ENST00000466591 CDCA3Q99618 268 aaPredicted RBP19.6■□□□□ 0.73
COL7A1-206ENST00000466591 LXNQ9BS40 222 aa19.6■□□□□ 0.73
COL7A1-206ENST00000466591 KCNMB3Q9NPA1 279 aa19.6■□□□□ 0.73
COL7A1-206ENST00000466591 SPG21Q9NZD8 308 aa19.6■□□□□ 0.73
COL7A1-206ENST00000466591 BARX2Q9UMQ3 279 aaPredicted RBP19.6■□□□□ 0.73
COL7A1-206ENST00000466591 INPP5FQ9Y2H2 1132 aa19.6■□□□□ 0.73
COL7A1-206ENST00000466591 COL4A3BPQ9Y5P4 624 aa19.6■□□□□ 0.73
COL7A1-206ENST00000466591 BRWD1Q9NSI6 2320 aa19.6■□□□□ 0.73
COL7A1-206ENST00000466591 NCOR1O75376 2440 aa19.6■□□□□ 0.73
COL7A1-206ENST00000466591 MUC3AQ02505 3323 aa19.59■□□□□ 0.73
COL7A1-206ENST00000466591 FNDC1Q4ZHG4 1894 aaPredicted RBP19.59■□□□□ 0.73
COL7A1-206ENST00000466591 EML1O00423 815 aa19.59■□□□□ 0.73
COL7A1-206ENST00000466591 SRGAP2CP0DJJ0 459 aa19.59■□□□□ 0.73
COL7A1-206ENST00000466591 YWHABP31946 246 aaKnown RBP19.59■□□□□ 0.73
COL7A1-206ENST00000466591 RFC5P40937 340 aa19.59■□□□□ 0.73
COL7A1-206ENST00000466591 RAB27AP51159 221 aa19.59■□□□□ 0.73
COL7A1-206ENST00000466591 CYP4A11Q02928 519 aa19.59■□□□□ 0.73
COL7A1-206ENST00000466591 EPHA7Q15375 998 aa19.59■□□□□ 0.73
COL7A1-206ENST00000466591 CALCRLQ16602 461 aa19.59■□□□□ 0.73
COL7A1-206ENST00000466591 LONRF3Q496Y0 759 aa19.59■□□□□ 0.73
COL7A1-206ENST00000466591 KSR1Q8IVT5 923 aa19.59■□□□□ 0.73
COL7A1-206ENST00000466591 TPH2Q8IWU9 490 aa19.59■□□□□ 0.73
COL7A1-206ENST00000466591 KHSRPQ92945 711 aaKnown RBP eCLIP19.59■□□□□ 0.73
COL7A1-206ENST00000466591 GTF3C6Q969F1 213 aa19.59■□□□□ 0.73
COL7A1-206ENST00000466591 PGBD4Q96DM1 585 aa19.59■□□□□ 0.73
COL7A1-206ENST00000466591 TMEM169Q96HH4 297 aa19.59■□□□□ 0.73
COL7A1-206ENST00000466591 CWH43Q9H720 699 aa19.59■□□□□ 0.73
COL7A1-206ENST00000466591 ZSWIM4Q9H7M6 989 aa19.59■□□□□ 0.73
COL7A1-206ENST00000466591 NGRNQ9NPE2 291 aaKnown RBP19.59■□□□□ 0.73
COL7A1-206ENST00000466591 VAV3Q9UKW4 847 aa19.59■□□□□ 0.73
COL7A1-206ENST00000466591 LZTS1Q9Y250 596 aa19.59■□□□□ 0.73
COL7A1-206ENST00000466591 PPME1Q9Y570 386 aa19.59■□□□□ 0.73
COL7A1-206ENST00000466591 WDR81Q562E7 1941 aa19.59■□□□□ 0.73
COL7A1-206ENST00000466591 GPR37L1O60883 481 aa19.58■□□□□ 0.72
COL7A1-206ENST00000466591 ZC3H11AO75152 810 aaKnown RBP eCLIP19.58■□□□□ 0.72
COL7A1-206ENST00000466591 PBX3P40426 434 aa19.58■□□□□ 0.72
COL7A1-206ENST00000466591 NPEPPSP55786 919 aa19.58■□□□□ 0.72
COL7A1-206ENST00000466591 ERVFC1P60507 584 aa19.58■□□□□ 0.72
COL7A1-206ENST00000466591 PLCB3Q01970 1234 aa19.58■□□□□ 0.72
COL7A1-206ENST00000466591 NCBP1Q09161 790 aaKnown RBP19.58■□□□□ 0.72
COL7A1-206ENST00000466591 NR5A1Q13285 461 aa19.58■□□□□ 0.72
COL7A1-206ENST00000466591 LLGL2Q6P1M3 1020 aa19.58■□□□□ 0.72
COL7A1-206ENST00000466591 B3GNT9Q6UX72 402 aa19.58■□□□□ 0.72
COL7A1-206ENST00000466591 URGCPQ8TCY9 931 aa19.58■□□□□ 0.72
COL7A1-206ENST00000466591 PLXNA4Q9HCM2 1894 aa19.57■□□□□ 0.72
COL7A1-206ENST00000466591 IGKV6-21A0A0C4DH24 114 aa19.57■□□□□ 0.72
COL7A1-206ENST00000466591 CARNS1A5YM72 827 aa19.57■□□□□ 0.72
COL7A1-206ENST00000466591 GAS2O43903 313 aaKnown RBP19.57■□□□□ 0.72
COL7A1-206ENST00000466591 ERLIN2O94905 339 aa19.57■□□□□ 0.72
COL7A1-206ENST00000466591 CENPBP07199 599 aaPredicted RBP19.57■□□□□ 0.72
COL7A1-206ENST00000466591 PHKA2P46019 1235 aa19.57■□□□□ 0.72
COL7A1-206ENST00000466591 GNL2Q13823 731 aaKnown RBP19.57■□□□□ 0.72
COL7A1-206ENST00000466591 CTTNQ14247 550 aaKnown RBP19.57■□□□□ 0.72
COL7A1-206ENST00000466591 SMC1AQ14683 1233 aaKnown RBP19.57■□□□□ 0.72
COL7A1-206ENST00000466591 ME3Q16798 604 aa19.57■□□□□ 0.72
COL7A1-206ENST00000466591 CLLU1OSQ5K130 101 aa19.57■□□□□ 0.72
COL7A1-206ENST00000466591 RSPH1Q8WYR4 309 aa19.57■□□□□ 0.72
COL7A1-206ENST00000466591 TMEM143Q96AN5 459 aa19.57■□□□□ 0.72
COL7A1-206ENST00000466591 DYDC2Q96IM9 177 aa19.57■□□□□ 0.72
COL7A1-206ENST00000466591 FAM193BQ96PV7 902 aaPredicted RBP19.57■□□□□ 0.72
COL7A1-206ENST00000466591 MTRQ99707 1265 aa19.57■□□□□ 0.72
COL7A1-206ENST00000466591 GBP3Q9H0R5 595 aa19.57■□□□□ 0.72
COL7A1-206ENST00000466591 RGL1Q9NZL6 768 aa19.57■□□□□ 0.72
COL7A1-206ENST00000466591 PCDHA12Q9UN75 941 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms