RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 ATL3Q6DD88 541 aa10.53□□□□□ -0.72
SDCCAG3-208ENST00000466579 KCNK18Q7Z418 384 aa10.53□□□□□ -0.72
SDCCAG3-208ENST00000466579 SRGAP1Q7Z6B7 1085 aa10.53□□□□□ -0.72
SDCCAG3-208ENST00000466579 TMCO2Q7Z6W1 182 aaPredicted RBP10.53□□□□□ -0.72
SDCCAG3-208ENST00000466579 NPAS4Q8IUM7 802 aa10.53□□□□□ -0.72
SDCCAG3-208ENST00000466579 MYOCDQ8IZQ8 938 aa10.53□□□□□ -0.72
SDCCAG3-208ENST00000466579 DEFB123Q8N688 67 aa10.53□□□□□ -0.72
SDCCAG3-208ENST00000466579 LINC00301Q8NCQ3 95 aa10.53□□□□□ -0.72
SDCCAG3-208ENST00000466579 ASAP3Q8TDY4 903 aa10.53□□□□□ -0.72
SDCCAG3-208ENST00000466579 ZNF689Q96CS4 500 aaPredicted RBP10.53□□□□□ -0.72
SDCCAG3-208ENST00000466579 PPP1R16BQ96T49 567 aa10.53□□□□□ -0.72
SDCCAG3-208ENST00000466579 NT5C3AQ9H0P0 336 aa10.53□□□□□ -0.72
SDCCAG3-208ENST00000466579 BHMT2Q9H2M3 363 aa10.53□□□□□ -0.72
SDCCAG3-208ENST00000466579 NKX2-4Q9H2Z4 354 aa10.53□□□□□ -0.72
SDCCAG3-208ENST00000466579 ZNF576Q9H609 170 aa10.53□□□□□ -0.72
SDCCAG3-208ENST00000466579 CHST12Q9NRB3 414 aa10.53□□□□□ -0.72
SDCCAG3-208ENST00000466579 DNM3Q9UQ16 869 aa10.53□□□□□ -0.72
SDCCAG3-208ENST00000466579 ZDHHC9Q9Y397 364 aa10.53□□□□□ -0.72
SDCCAG3-208ENST00000466579 INSL6Q9Y581 213 aa10.53□□□□□ -0.72
SDCCAG3-208ENST00000466579 TRANK1O15050 2925 aa10.53□□□□□ -0.72
SDCCAG3-208ENST00000466579 E9PMD0 336 aa10.52□□□□□ -0.73
SDCCAG3-208ENST00000466579 HAX1O00165 279 aa10.52□□□□□ -0.73
SDCCAG3-208ENST00000466579 USO1O60763 962 aaKnown RBP10.52□□□□□ -0.73
SDCCAG3-208ENST00000466579 PPP6R2O75170 966 aa10.52□□□□□ -0.73
SDCCAG3-208ENST00000466579 ARHGEF15O94989 841 aa10.52□□□□□ -0.73
SDCCAG3-208ENST00000466579 CA3P07451 260 aa10.52□□□□□ -0.73
SDCCAG3-208ENST00000466579 SFPQP23246 707 aaKnown RBP eCLIP10.52□□□□□ -0.73
SDCCAG3-208ENST00000466579 TAP1Q03518 808 aa10.52□□□□□ -0.73
SDCCAG3-208ENST00000466579 TFDP1Q14186 410 aa10.52□□□□□ -0.73
SDCCAG3-208ENST00000466579 CDCA2Q69YH5 1023 aaPredicted RBP10.52□□□□□ -0.73
SDCCAG3-208ENST00000466579 C1orf186Q6ZWK4 172 aa10.52□□□□□ -0.73
SDCCAG3-208ENST00000466579 SLC24A5Q71RS6 500 aa10.52□□□□□ -0.73
SDCCAG3-208ENST00000466579 Q7L0L9 218 aa10.52□□□□□ -0.73
SDCCAG3-208ENST00000466579 CABP7Q86V35 215 aa10.52□□□□□ -0.73
SDCCAG3-208ENST00000466579 SYT2Q8N9I0 419 aaPredicted RBP10.52□□□□□ -0.73
SDCCAG3-208ENST00000466579 ZNF668Q96K58 619 aaPredicted RBP10.52□□□□□ -0.73
SDCCAG3-208ENST00000466579 NLRP4Q96MN2 994 aa10.52□□□□□ -0.73
SDCCAG3-208ENST00000466579 CCDC43Q96MW1 224 aaKnown RBP10.52□□□□□ -0.73
SDCCAG3-208ENST00000466579 ZNF396Q96N95 335 aaPredicted RBP10.52□□□□□ -0.73
SDCCAG3-208ENST00000466579 GUCD1Q96NT3 240 aa10.52□□□□□ -0.73
SDCCAG3-208ENST00000466579 ADAM2Q99965 735 aa10.52□□□□□ -0.73
SDCCAG3-208ENST00000466579 TIPINQ9BVW5 301 aa10.52□□□□□ -0.73
SDCCAG3-208ENST00000466579 CSRNP2Q9H175 543 aa10.52□□□□□ -0.73
SDCCAG3-208ENST00000466579 POLR3FQ9H1D9 316 aaPredicted RBP10.52□□□□□ -0.73
SDCCAG3-208ENST00000466579 ELAC1Q9H777 363 aaKnown RBP10.52□□□□□ -0.73
SDCCAG3-208ENST00000466579 MINDY3Q9H8M7 445 aa10.52□□□□□ -0.73
SDCCAG3-208ENST00000466579 KCND2Q9NZV8 630 aa10.52□□□□□ -0.73
SDCCAG3-208ENST00000466579 RALGAPA2Q2PPJ7 1873 aa10.52□□□□□ -0.73
SDCCAG3-208ENST00000466579 FNDC1Q4ZHG4 1894 aaPredicted RBP10.52□□□□□ -0.73
SDCCAG3-208ENST00000466579 LCHNA4D1U4 455 aa10.51□□□□□ -0.73
SDCCAG3-208ENST00000466579 LINC01553A4QN01 128 aa10.51□□□□□ -0.73
SDCCAG3-208ENST00000466579 CSDE1O75534 798 aaKnown RBP10.51□□□□□ -0.73
SDCCAG3-208ENST00000466579 DGKIO75912 1065 aa10.51□□□□□ -0.73
SDCCAG3-208ENST00000466579 LINC00271P0C7V0 271 aa10.51□□□□□ -0.73
SDCCAG3-208ENST00000466579 SRGAP2CP0DJJ0 459 aa10.51□□□□□ -0.73
SDCCAG3-208ENST00000466579 GUCY2CP25092 1073 aa10.51□□□□□ -0.73
SDCCAG3-208ENST00000466579 MARCKSP29966 332 aaPredicted RBP10.51□□□□□ -0.73
SDCCAG3-208ENST00000466579 HOXA11P31270 313 aaPredicted RBP10.51□□□□□ -0.73
SDCCAG3-208ENST00000466579 DDIT3P35638 169 aa10.51□□□□□ -0.73
SDCCAG3-208ENST00000466579 UBA7P41226 1012 aa10.51□□□□□ -0.73
SDCCAG3-208ENST00000466579 PHKA2P46019 1235 aa10.51□□□□□ -0.73
SDCCAG3-208ENST00000466579 SLC12A3P55017 1021 aa10.51□□□□□ -0.73
SDCCAG3-208ENST00000466579 MBTD1Q05BQ5 628 aa10.51□□□□□ -0.73
SDCCAG3-208ENST00000466579 MAPK7Q13164 816 aa10.51□□□□□ -0.73
SDCCAG3-208ENST00000466579 AMHR2Q16671 573 aa10.51□□□□□ -0.73
SDCCAG3-208ENST00000466579 RINT1Q6NUQ1 792 aa10.51□□□□□ -0.73
SDCCAG3-208ENST00000466579 USP49Q70CQ1 688 aa10.51□□□□□ -0.73
SDCCAG3-208ENST00000466579 ZNF598Q86UK7 904 aaKnown RBP10.51□□□□□ -0.73
SDCCAG3-208ENST00000466579 DAW1Q8N136 415 aa10.51□□□□□ -0.73
SDCCAG3-208ENST00000466579 KRI1Q8N9T8 703 aaKnown RBP10.51□□□□□ -0.73
SDCCAG3-208ENST00000466579 RNF149Q8NC42 400 aa10.51□□□□□ -0.73
SDCCAG3-208ENST00000466579 SPRYD3Q8NCJ5 442 aa10.51□□□□□ -0.73
SDCCAG3-208ENST00000466579 LRRC15Q8TF66 581 aa10.51□□□□□ -0.73
SDCCAG3-208ENST00000466579 KIFAP3Q92845 792 aa10.51□□□□□ -0.73
SDCCAG3-208ENST00000466579 KCNN1Q92952 543 aa10.51□□□□□ -0.73
SDCCAG3-208ENST00000466579 SCLT1Q96NL6 688 aa10.51□□□□□ -0.73
SDCCAG3-208ENST00000466579 ZBED2Q9BTP6 218 aa10.51□□□□□ -0.73
SDCCAG3-208ENST00000466579 SLC28A3Q9HAS3 691 aa10.51□□□□□ -0.73
SDCCAG3-208ENST00000466579 GPRC5CQ9NQ84 441 aa10.51□□□□□ -0.73
SDCCAG3-208ENST00000466579 BMP2KQ9NSY1 1161 aaPredicted RBP10.51□□□□□ -0.73
SDCCAG3-208ENST00000466579 BLOC1S4Q9NUP1 217 aa10.51□□□□□ -0.73
SDCCAG3-208ENST00000466579 AGPAT5Q9NUQ2 364 aa10.51□□□□□ -0.73
SDCCAG3-208ENST00000466579 NLRC5Q86WI3 1866 aa10.51□□□□□ -0.73
SDCCAG3-208ENST00000466579 MYO9BQ13459 2157 aa10.5□□□□□ -0.73
SDCCAG3-208ENST00000466579 A0A0U1RQF3 1178 aa10.5□□□□□ -0.73
SDCCAG3-208ENST00000466579 DENND3A2RUS2 1198 aa10.5□□□□□ -0.73
SDCCAG3-208ENST00000466579 SPTLC2O15270 562 aa10.5□□□□□ -0.73
SDCCAG3-208ENST00000466579 ZNF623O75123 536 aa10.5□□□□□ -0.73
SDCCAG3-208ENST00000466579 PLA2G4BP0C869 781 aa10.5□□□□□ -0.73
SDCCAG3-208ENST00000466579 STAG3L1P0CL83 205 aa10.5□□□□□ -0.73
SDCCAG3-208ENST00000466579 ZSCAN20P17040 1043 aaPredicted RBP10.5□□□□□ -0.73
SDCCAG3-208ENST00000466579 FGFR4P22455 802 aa10.5□□□□□ -0.73
SDCCAG3-208ENST00000466579 AXLP30530 894 aa10.5□□□□□ -0.73
SDCCAG3-208ENST00000466579 NAMPTP43490 491 aa10.5□□□□□ -0.73
SDCCAG3-208ENST00000466579 ERVK-21P61565 698 aa10.5□□□□□ -0.73
SDCCAG3-208ENST00000466579 GRIN2CQ14957 1233 aa10.5□□□□□ -0.73
SDCCAG3-208ENST00000466579 FAM187BQ17R55 369 aa10.5□□□□□ -0.73
SDCCAG3-208ENST00000466579 PPP2R2DQ66LE6 453 aa10.5□□□□□ -0.73
SDCCAG3-208ENST00000466579 CMTR2Q8IYT2 770 aaKnown RBP10.5□□□□□ -0.73
SDCCAG3-208ENST00000466579 BSNDQ8WZ55 320 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms