RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 PIK3AP1Q6ZUJ8 805 aa7.8□□□□□ -1.16
CLDN4-204ENST00000466411 PLA2G4DQ86XP0 818 aa7.8□□□□□ -1.16
CLDN4-204ENST00000466411 TMEM192Q8IY95 271 aa7.8□□□□□ -1.16
CLDN4-204ENST00000466411 OR6J1Q8NGC5 347 aa7.8□□□□□ -1.16
CLDN4-204ENST00000466411 SUSD6Q92537 303 aa7.8□□□□□ -1.16
CLDN4-204ENST00000466411 ZFRQ96KR1 1074 aaKnown RBP7.8□□□□□ -1.16
CLDN4-204ENST00000466411 SAMD11Q96NU1 681 aa7.8□□□□□ -1.16
CLDN4-204ENST00000466411 ZNF577Q9BSK1 485 aa7.8□□□□□ -1.16
CLDN4-204ENST00000466411 JPH1Q9HDC5 661 aaPredicted RBP7.8□□□□□ -1.16
CLDN4-204ENST00000466411 DDX25Q9UHL0 483 aaKnown RBP7.8□□□□□ -1.16
CLDN4-204ENST00000466411 KCNJ14Q9UNX9 436 aa7.8□□□□□ -1.16
CLDN4-204ENST00000466411 CACNA1IQ9P0X4 2223 aa7.79□□□□□ -1.16
CLDN4-204ENST00000466411 VPS37CA5D8V6 355 aaPredicted RBP7.79□□□□□ -1.16
CLDN4-204ENST00000466411 WDR64B1ANS9 1081 aa7.79□□□□□ -1.16
CLDN4-204ENST00000466411 BTBD18B2RXH4 712 aa7.79□□□□□ -1.16
CLDN4-204ENST00000466411 SPTLC1O15269 473 aa7.79□□□□□ -1.16
CLDN4-204ENST00000466411 PI15O43692 258 aa7.79□□□□□ -1.16
CLDN4-204ENST00000466411 GAS7O60861 476 aa7.79□□□□□ -1.16
CLDN4-204ENST00000466411 LGR5O75473 907 aa7.79□□□□□ -1.16
CLDN4-204ENST00000466411 GGPS1O95749 300 aa7.79□□□□□ -1.16
CLDN4-204ENST00000466411 HOXD8P13378 290 aaPredicted RBP7.79□□□□□ -1.16
CLDN4-204ENST00000466411 JAK3P52333 1124 aa7.79□□□□□ -1.16
CLDN4-204ENST00000466411 RBL2Q08999 1139 aa7.79□□□□□ -1.16
CLDN4-204ENST00000466411 ANGPT1Q15389 498 aa7.79□□□□□ -1.16
CLDN4-204ENST00000466411 INF2Q27J81 1249 aa7.79□□□□□ -1.16
CLDN4-204ENST00000466411 LETM2Q2VYF4 491 aa7.79□□□□□ -1.16
CLDN4-204ENST00000466411 FAM160B1Q5W0V3 765 aa7.79□□□□□ -1.16
CLDN4-204ENST00000466411 ZNF746Q6NUN9 644 aaPredicted RBP7.79□□□□□ -1.16
CLDN4-204ENST00000466411 FAM117BQ6P1L5 589 aa7.79□□□□□ -1.16
CLDN4-204ENST00000466411 TRAF7Q6Q0C0 670 aa7.79□□□□□ -1.16
CLDN4-204ENST00000466411 FAM43BQ6ZT52 329 aaPredicted RBP7.79□□□□□ -1.16
CLDN4-204ENST00000466411 EEPD1Q7L9B9 569 aa7.79□□□□□ -1.16
CLDN4-204ENST00000466411 EXOC8Q8IYI6 725 aa7.79□□□□□ -1.16
CLDN4-204ENST00000466411 KCTD17Q8N5Z5 321 aa7.79□□□□□ -1.16
CLDN4-204ENST00000466411 RETREG2Q8NC44 543 aa7.79□□□□□ -1.16
CLDN4-204ENST00000466411 IL31RAQ8NI17 732 aa7.79□□□□□ -1.16
CLDN4-204ENST00000466411 PPP1R13LQ8WUF5 828 aa7.79□□□□□ -1.16
CLDN4-204ENST00000466411 TNFRSF25Q93038 417 aa7.79□□□□□ -1.16
CLDN4-204ENST00000466411 SPATA33Q96N06 139 aa7.79□□□□□ -1.16
CLDN4-204ENST00000466411 MBOAT7Q96N66 472 aa7.79□□□□□ -1.16
CLDN4-204ENST00000466411 AIFM3Q96NN9 605 aa7.79□□□□□ -1.16
CLDN4-204ENST00000466411 TEKT3Q9BXF9 490 aa7.79□□□□□ -1.16
CLDN4-204ENST00000466411 AZI2Q9H6S1 392 aa7.79□□□□□ -1.16
CLDN4-204ENST00000466411 PDGFCQ9NRA1 345 aa7.79□□□□□ -1.16
CLDN4-204ENST00000466411 SLC9A2Q9UBY0 812 aa7.79□□□□□ -1.16
CLDN4-204ENST00000466411 USP15Q9Y4E8 981 aaPredicted RBP7.79□□□□□ -1.16
CLDN4-204ENST00000466411 CNOT1A5YKK6 2376 aaKnown RBP7.79□□□□□ -1.16
CLDN4-204ENST00000466411 GCN1Q92616 2671 aaKnown RBP7.79□□□□□ -1.16
CLDN4-204ENST00000466411 MYH9P35579 1960 aaKnown RBP7.79□□□□□ -1.16
CLDN4-204ENST00000466411 EMSYQ7Z589 1322 aa7.78□□□□□ -1.16
CLDN4-204ENST00000466411 IGLV3-22A0A075B6J6 115 aa7.78□□□□□ -1.16
CLDN4-204ENST00000466411 SOBPA7XYQ1 873 aa7.78□□□□□ -1.16
CLDN4-204ENST00000466411 CYSRT1A8MQ03 144 aa7.78□□□□□ -1.16
CLDN4-204ENST00000466411 FAM86B1E9PN63 330 aa7.78□□□□□ -1.16
CLDN4-204ENST00000466411 GRM6O15303 877 aa7.78□□□□□ -1.16
CLDN4-204ENST00000466411 HOXA2O43364 376 aa7.78□□□□□ -1.16
CLDN4-204ENST00000466411 SLC26A4O43511 780 aa7.78□□□□□ -1.16
CLDN4-204ENST00000466411 PPFIA3O75145 1194 aa7.78□□□□□ -1.16
CLDN4-204ENST00000466411 BRD1O95696 1058 aa7.78□□□□□ -1.16
CLDN4-204ENST00000466411 GLP2RO95838 553 aa7.78□□□□□ -1.16
CLDN4-204ENST00000466411 PSAPP07602 524 aa7.78□□□□□ -1.16
CLDN4-204ENST00000466411 FAM86B2P0C5J1 330 aa7.78□□□□□ -1.16
CLDN4-204ENST00000466411 GNAT1P11488 350 aa7.78□□□□□ -1.16
CLDN4-204ENST00000466411 KCNA2P16389 499 aa7.78□□□□□ -1.16
CLDN4-204ENST00000466411 ATF7P17544 494 aaPredicted RBP7.78□□□□□ -1.16
CLDN4-204ENST00000466411 ITGB5P18084 799 aa7.78□□□□□ -1.16
CLDN4-204ENST00000466411 NDUFV2P19404 249 aa7.78□□□□□ -1.16
CLDN4-204ENST00000466411 SYT1P21579 422 aa7.78□□□□□ -1.16
CLDN4-204ENST00000466411 MUTP22033 750 aa7.78□□□□□ -1.16
CLDN4-204ENST00000466411 PRPHP41219 470 aa7.78□□□□□ -1.16
CLDN4-204ENST00000466411 NUCB2P80303 420 aa7.78□□□□□ -1.16
CLDN4-204ENST00000466411 ARHGAP1Q07960 439 aa7.78□□□□□ -1.16
CLDN4-204ENST00000466411 NR5A1Q13285 461 aa7.78□□□□□ -1.16
CLDN4-204ENST00000466411 BFSP2Q13515 415 aa7.78□□□□□ -1.16
CLDN4-204ENST00000466411 MBTPS1Q14703 1052 aa7.78□□□□□ -1.16
CLDN4-204ENST00000466411 CALCRLQ16602 461 aa7.78□□□□□ -1.16
CLDN4-204ENST00000466411 PRR16Q569H4 304 aa7.78□□□□□ -1.16
CLDN4-204ENST00000466411 LRCH2Q5VUJ6 765 aa7.78□□□□□ -1.16
CLDN4-204ENST00000466411 ARL6IP4Q66PJ3 421 aaKnown RBP7.78□□□□□ -1.16
CLDN4-204ENST00000466411 CWF19L1Q69YN2 538 aaKnown RBP7.78□□□□□ -1.16
CLDN4-204ENST00000466411 MIS18BP1Q6P0N0 1132 aa7.78□□□□□ -1.16
CLDN4-204ENST00000466411 NFRKBQ6P4R8 1299 aa7.78□□□□□ -1.16
CLDN4-204ENST00000466411 ERMNQ8TAM6 284 aa7.78□□□□□ -1.16
CLDN4-204ENST00000466411 SEPT1Q8WYJ6 367 aa7.78□□□□□ -1.16
CLDN4-204ENST00000466411 DHX38Q92620 1227 aaKnown RBP7.78□□□□□ -1.16
CLDN4-204ENST00000466411 SLC5A5Q92911 643 aa7.78□□□□□ -1.16
CLDN4-204ENST00000466411 ATP6V0A1Q93050 837 aa7.78□□□□□ -1.16
CLDN4-204ENST00000466411 RPGRIP1Q96KN7 1286 aa7.78□□□□□ -1.16
CLDN4-204ENST00000466411 FAM167AQ96KS9 214 aa7.78□□□□□ -1.16
CLDN4-204ENST00000466411 PURBQ96QR8 312 aaKnown RBP7.78□□□□□ -1.16
CLDN4-204ENST00000466411 MTG1Q9BT17 334 aaPredicted RBP7.78□□□□□ -1.16
CLDN4-204ENST00000466411 AGO4Q9HCK5 861 aaKnown RBP7.78□□□□□ -1.16
CLDN4-204ENST00000466411 TMEM260Q9NX78 707 aa7.78□□□□□ -1.16
CLDN4-204ENST00000466411 PPME1Q9Y570 386 aa7.78□□□□□ -1.16
CLDN4-204ENST00000466411 MORC2Q9Y6X9 1032 aaPredicted RBP7.78□□□□□ -1.16
CLDN4-204ENST00000466411 WDR81Q562E7 1941 aa7.78□□□□□ -1.16
CLDN4-204ENST00000466411 DOCK5Q9H7D0 1870 aa7.77□□□□□ -1.17
CLDN4-204ENST00000466411 DCDC2BA2VCK2 349 aa7.77□□□□□ -1.17
CLDN4-204ENST00000466411 RNF40O75150 1001 aa7.77□□□□□ -1.17
CLDN4-204ENST00000466411 F2P00734 622 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms