RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 MAEAQ7L5Y9 396 aa28.8■■■□□ 2.2
SMC4-206ENST00000465903 RNF149Q8NC42 400 aa28.8■■■□□ 2.2
SMC4-206ENST00000465903 ZNF689Q96CS4 500 aaPredicted RBP28.8■■■□□ 2.2
SMC4-206ENST00000465903 BHMT2Q9H2M3 363 aa28.8■■■□□ 2.2
SMC4-206ENST00000465903 PRDM12Q9H4Q4 367 aa28.8■■■□□ 2.2
SMC4-206ENST00000465903 MINDY3Q9H8M7 445 aa28.8■■■□□ 2.2
SMC4-206ENST00000465903 GPRC5CQ9NQ84 441 aa28.8■■■□□ 2.2
SMC4-206ENST00000465903 C1orf112Q9NSG2 853 aa28.8■■■□□ 2.2
SMC4-206ENST00000465903 DENND3A2RUS2 1198 aa28.79■■■□□ 2.2
SMC4-206ENST00000465903 ARHGEF35A5YM69 484 aa28.79■■■□□ 2.2
SMC4-206ENST00000465903 PKP1Q13835 747 aa28.79■■■□□ 2.2
SMC4-206ENST00000465903 SLC24A5Q71RS6 500 aa28.79■■■□□ 2.2
SMC4-206ENST00000465903 SRGAP1Q7Z6B7 1085 aa28.79■■■□□ 2.2
SMC4-206ENST00000465903 NPAS4Q8IUM7 802 aa28.79■■■□□ 2.2
SMC4-206ENST00000465903 AK8Q96MA6 479 aa28.79■■■□□ 2.2
SMC4-206ENST00000465903 CERS4Q9HA82 394 aa28.79■■■□□ 2.2
SMC4-206ENST00000465903 DGKIO75912 1065 aa28.78■■■□□ 2.2
SMC4-206ENST00000465903 EYA4O95677 639 aa28.78■■■□□ 2.2
SMC4-206ENST00000465903 PDIA4P13667 645 aaKnown RBP28.78■■■□□ 2.2
SMC4-206ENST00000465903 PTENP60484 403 aa28.78■■■□□ 2.2
SMC4-206ENST00000465903 CEBPZQ03701 1054 aaKnown RBP28.78■■■□□ 2.2
SMC4-206ENST00000465903 CAPSQ13938 189 aa28.78■■■□□ 2.2
SMC4-206ENST00000465903 FOXD4L5Q5VV16 416 aaPredicted RBP28.78■■■□□ 2.2
SMC4-206ENST00000465903 MCPH1Q8NEM0 835 aa28.78■■■□□ 2.2
SMC4-206ENST00000465903 FOXD4L4Q8WXT5 416 aaPredicted RBP28.78■■■□□ 2.2
SMC4-206ENST00000465903 YME1L1Q96TA2 773 aa28.78■■■□□ 2.2
SMC4-206ENST00000465903 POLR3FQ9H1D9 316 aaPredicted RBP28.78■■■□□ 2.2
SMC4-206ENST00000465903 DNM3Q9UQ16 869 aa28.78■■■□□ 2.2
SMC4-206ENST00000465903 RALGAPA2Q2PPJ7 1873 aa28.77■■■□□ 2.2
SMC4-206ENST00000465903 EPOPA6NHQ4 379 aa28.77■■■□□ 2.2
SMC4-206ENST00000465903 ZSCAN22P10073 491 aaPredicted RBP28.77■■■□□ 2.2
SMC4-206ENST00000465903 ZSCAN20P17040 1043 aaPredicted RBP28.77■■■□□ 2.2
SMC4-206ENST00000465903 SFPQP23246 707 aaKnown RBP eCLIP28.77■■■□□ 2.2
SMC4-206ENST00000465903 MARCKSP29966 332 aaPredicted RBP28.77■■■□□ 2.2
SMC4-206ENST00000465903 POU5F1BQ06416 359 aa28.77■■■□□ 2.2
SMC4-206ENST00000465903 CABP7Q86V35 215 aa28.77■■■□□ 2.2
SMC4-206ENST00000465903 IFNLR1Q8IU57 520 aaPredicted RBP28.77■■■□□ 2.2
SMC4-206ENST00000465903 PLIN2Q99541 437 aa28.77■■■□□ 2.2
SMC4-206ENST00000465903 FBXO2Q9UK22 296 aaPredicted RBP28.77■■■□□ 2.2
SMC4-206ENST00000465903 STXBP5LQ9Y2K9 1186 aa28.77■■■□□ 2.2
SMC4-206ENST00000465903 MYH11P35749 1972 aa28.77■■■□□ 2.2
SMC4-206ENST00000465903 STAG3L1P0CL83 205 aa28.76■■■□□ 2.19
SMC4-206ENST00000465903 LONP1P36776 959 aaKnown RBP28.76■■■□□ 2.19
SMC4-206ENST00000465903 ERVK-21P61565 698 aa28.76■■■□□ 2.19
SMC4-206ENST00000465903 ZRSR1Q15695 479 aaKnown RBP28.76■■■□□ 2.19
SMC4-206ENST00000465903 POLD4Q9HCU8 107 aa28.76■■■□□ 2.19
SMC4-206ENST00000465903 CHST12Q9NRB3 414 aa28.76■■■□□ 2.19
SMC4-206ENST00000465903 MORC2Q9Y6X9 1032 aaPredicted RBP28.76■■■□□ 2.19
SMC4-206ENST00000465903 KIAA1671Q9BY89 1806 aa28.76■■■□□ 2.19
SMC4-206ENST00000465903 RFXAPO00287 272 aa28.75■■■□□ 2.19
SMC4-206ENST00000465903 F13A1P00488 732 aa28.75■■■□□ 2.19
SMC4-206ENST00000465903 TFDP1Q14186 410 aa28.75■■■□□ 2.19
SMC4-206ENST00000465903 SLC39A14Q15043 492 aa28.75■■■□□ 2.19
SMC4-206ENST00000465903 TMEM119Q4V9L6 283 aa28.75■■■□□ 2.19
SMC4-206ENST00000465903 FAM102BQ5T8I3 360 aa28.75■■■□□ 2.19
SMC4-206ENST00000465903 CATSPER4Q7RTX7 472 aa28.75■■■□□ 2.19
SMC4-206ENST00000465903 LRRC15Q8TF66 581 aa28.75■■■□□ 2.19
SMC4-206ENST00000465903 ARNTL2Q8WYA1 636 aa28.75■■■□□ 2.19
SMC4-206ENST00000465903 BSNDQ8WZ55 320 aa28.75■■■□□ 2.19
SMC4-206ENST00000465903 SRPRBQ9Y5M8 271 aaKnown RBP28.75■■■□□ 2.19
SMC4-206ENST00000465903 SLC26A4O43511 780 aa28.74■■■□□ 2.19
SMC4-206ENST00000465903 IBSPP21815 317 aaPredicted RBP28.74■■■□□ 2.19
SMC4-206ENST00000465903 PHKA2P46019 1235 aa28.74■■■□□ 2.19
SMC4-206ENST00000465903 NASPP49321 788 aaPredicted RBP28.74■■■□□ 2.19
SMC4-206ENST00000465903 GATMP50440 423 aa28.74■■■□□ 2.19
SMC4-206ENST00000465903 ADGRE1Q14246 886 aa28.74■■■□□ 2.19
SMC4-206ENST00000465903 KCTD17Q8N5Z5 321 aa28.74■■■□□ 2.19
SMC4-206ENST00000465903 TGS1Q96RS0 853 aaKnown RBP28.74■■■□□ 2.19
SMC4-206ENST00000465903 NT5C3AQ9H0P0 336 aa28.74■■■□□ 2.19
SMC4-206ENST00000465903 CSRNP2Q9H175 543 aa28.74■■■□□ 2.19
SMC4-206ENST00000465903 ELAC1Q9H777 363 aaKnown RBP28.74■■■□□ 2.19
SMC4-206ENST00000465903 PCDHB7Q9Y5E2 793 aa28.74■■■□□ 2.19
SMC4-206ENST00000465903 TRANK1O15050 2925 aa28.73■■■□□ 2.19
SMC4-206ENST00000465903 LINC00271P0C7V0 271 aa28.73■■■□□ 2.19
SMC4-206ENST00000465903 UBA7P41226 1012 aa28.73■■■□□ 2.19
SMC4-206ENST00000465903 USP49Q70CQ1 688 aa28.73■■■□□ 2.19
SMC4-206ENST00000465903 ECHDC2Q86YB7 292 aa28.73■■■□□ 2.19
SMC4-206ENST00000465903 CLIC6Q96NY7 704 aa28.73■■■□□ 2.19
SMC4-206ENST00000465903 C17orf80Q9BSJ5 609 aa28.73■■■□□ 2.19
SMC4-206ENST00000465903 NFKBIZQ9BYH8 718 aa28.73■■■□□ 2.19
SMC4-206ENST00000465903 AGPAT5Q9NUQ2 364 aa28.73■■■□□ 2.19
SMC4-206ENST00000465903 TMEM161AQ9NX61 479 aa28.73■■■□□ 2.19
SMC4-206ENST00000465903 TFIP11Q9UBB9 837 aaKnown RBP28.73■■■□□ 2.19
SMC4-206ENST00000465903 LRFN2Q9ULH4 789 aa28.73■■■□□ 2.19
SMC4-206ENST00000465903 ADGRA3Q8IWK6 1321 aa28.72■■■□□ 2.19
SMC4-206ENST00000465903 A0A0U1RQF3 1178 aa28.72■■■□□ 2.19
SMC4-206ENST00000465903 MBTD1Q05BQ5 628 aa28.72■■■□□ 2.19
SMC4-206ENST00000465903 SPECC1Q5M775 1068 aa28.72■■■□□ 2.19
SMC4-206ENST00000465903 RINT1Q6NUQ1 792 aa28.72■■■□□ 2.19
SMC4-206ENST00000465903 C1orf186Q6ZWK4 172 aa28.72■■■□□ 2.19
SMC4-206ENST00000465903 SYT2Q8N9I0 419 aaPredicted RBP28.72■■■□□ 2.19
SMC4-206ENST00000465903 EPSTI1Q96J88 318 aa28.72■■■□□ 2.19
SMC4-206ENST00000465903 RUSC1Q9BVN2 902 aa28.72■■■□□ 2.19
SMC4-206ENST00000465903 TRAIPQ9BWF2 469 aa28.72■■■□□ 2.19
SMC4-206ENST00000465903 CCSER1Q9C0I3 900 aa28.72■■■□□ 2.19
SMC4-206ENST00000465903 RNF19AQ9NV58 838 aa28.72■■■□□ 2.19
SMC4-206ENST00000465903 DACT1Q9NYF0 836 aa28.72■■■□□ 2.19
SMC4-206ENST00000465903 PIN4Q9Y237 131 aaKnown RBP28.72■■■□□ 2.19
SMC4-206ENST00000465903 COL4A4P53420 1690 aaPredicted RBP28.72■■■□□ 2.19
SMC4-206ENST00000465903 HOXA11P31270 313 aaPredicted RBP28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms