RNA–Protein interactions for RNA: ENST00000465756.5

NPHP3-203, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 3,852 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-203ENST00000465756 SRGAP2CP0DJJ0 459 aa11.92□□□□□ -0.5
NPHP3-203ENST00000465756 IGFBP4P22692 258 aa11.92□□□□□ -0.5
NPHP3-203ENST00000465756 RRAGBQ5VZM2 374 aa11.92□□□□□ -0.5
NPHP3-203ENST00000465756 FAM205CA6NFA0 338 aa11.92□□□□□ -0.5
NPHP3-203ENST00000465756 EML1O00423 815 aa11.92□□□□□ -0.5
NPHP3-203ENST00000465756 ZNF862O60290 1169 aa11.92□□□□□ -0.5
NPHP3-203ENST00000465756 ZSCAN22P10073 491 aaPredicted RBP11.92□□□□□ -0.5
NPHP3-203ENST00000465756 NAMPTP43490 491 aa11.92□□□□□ -0.5
NPHP3-203ENST00000465756 RNASELQ05823 741 aaKnown RBP11.92□□□□□ -0.5
NPHP3-203ENST00000465756 MGAT3Q09327 533 aa11.92□□□□□ -0.5
NPHP3-203ENST00000465756 ST3GAL1Q11201 340 aa11.92□□□□□ -0.5
NPHP3-203ENST00000465756 PLA2G4FQ68DD2 849 aa11.92□□□□□ -0.5
NPHP3-203ENST00000465756 RNF169Q8NCN4 708 aa11.92□□□□□ -0.5
NPHP3-203ENST00000465756 HSD17B14Q9BPX1 270 aa11.92□□□□□ -0.5
NPHP3-203ENST00000465756 DDX19AQ9NUU7 478 aaKnown RBP11.92□□□□□ -0.5
NPHP3-203ENST00000465756 R3HCC1Q9Y3T6 440 aaKnown RBP11.92□□□□□ -0.5
NPHP3-203ENST00000465756 PCDHB6Q9Y5E3 794 aa11.92□□□□□ -0.5
NPHP3-203ENST00000465756 RARRES1P49788 294 aa11.92□□□□□ -0.5
NPHP3-203ENST00000465756 ALCAMQ13740 583 aa11.92□□□□□ -0.5
NPHP3-203ENST00000465756 SKIV2LQ15477 1246 aaKnown RBP11.92□□□□□ -0.5
NPHP3-203ENST00000465756 PDE12Q6L8Q7 609 aaKnown RBP11.92□□□□□ -0.5
NPHP3-203ENST00000465756 LRRC43Q8N309 656 aa11.92□□□□□ -0.5
NPHP3-203ENST00000465756 PPP1R13LQ8WUF5 828 aa11.92□□□□□ -0.5
NPHP3-203ENST00000465756 ZMYND15Q9H091 742 aa11.92□□□□□ -0.5
NPHP3-203ENST00000465756 SSX2IPQ9Y2D8 614 aa11.92□□□□□ -0.5
NPHP3-203ENST00000465756 STXBP5LQ9Y2K9 1186 aa11.92□□□□□ -0.5
NPHP3-203ENST00000465756 MORC2Q9Y6X9 1032 aaPredicted RBP11.92□□□□□ -0.5
NPHP3-203ENST00000465756 CCDC169A6NNP5 214 aa11.91□□□□□ -0.5
NPHP3-203ENST00000465756 XPOTO43592 962 aaKnown RBP11.91□□□□□ -0.5
NPHP3-203ENST00000465756 SLITRK3O94933 977 aa11.91□□□□□ -0.5
NPHP3-203ENST00000465756 KIF20AO95235 890 aa11.91□□□□□ -0.5
NPHP3-203ENST00000465756 CTNNB1P35222 781 aa11.91□□□□□ -0.5
NPHP3-203ENST00000465756 YARSP54577 528 aaKnown RBP11.91□□□□□ -0.5
NPHP3-203ENST00000465756 DCAF4L1Q3SXM0 396 aa11.91□□□□□ -0.5
NPHP3-203ENST00000465756 SCAND2PQ9GZW5 306 aaPredicted RBP11.91□□□□□ -0.5
NPHP3-203ENST00000465756 USP25Q9UHP3 1055 aa11.91□□□□□ -0.5
NPHP3-203ENST00000465756 CUTAO60888 179 aa11.91□□□□□ -0.5
NPHP3-203ENST00000465756 CHRNA1P02708 482 aa11.91□□□□□ -0.5
NPHP3-203ENST00000465756 GAP43P17677 238 aa11.91□□□□□ -0.5
NPHP3-203ENST00000465756 ITGB8P26012 769 aa11.91□□□□□ -0.5
NPHP3-203ENST00000465756 MATR3P43243 847 aaKnown RBP eCLIP11.91□□□□□ -0.5
NPHP3-203ENST00000465756 SV2BQ7L1I2 683 aa11.91□□□□□ -0.5
NPHP3-203ENST00000465756 TOP1MTQ969P6 601 aa11.91□□□□□ -0.5
NPHP3-203ENST00000465756 TMEM60Q9H2L4 133 aa11.91□□□□□ -0.5
NPHP3-203ENST00000465756 ODF2LQ9ULJ1 636 aa11.91□□□□□ -0.5
NPHP3-203ENST00000465756 ENPP3O14638 875 aa11.91□□□□□ -0.5
NPHP3-203ENST00000465756 STAT6P42226 847 aa11.91□□□□□ -0.5
NPHP3-203ENST00000465756 EPHB4P54760 987 aa11.91□□□□□ -0.5
NPHP3-203ENST00000465756 LAMTOR4Q0VGL1 99 aa11.91□□□□□ -0.5
NPHP3-203ENST00000465756 UGCGQ16739 394 aa11.91□□□□□ -0.5
NPHP3-203ENST00000465756 PRPF31Q8WWY3 499 aaKnown RBP11.91□□□□□ -0.5
NPHP3-203ENST00000465756 GTPBP4Q9BZE4 634 aaKnown RBP11.91□□□□□ -0.5
NPHP3-203ENST00000465756 SEMA6BQ9H3T3 888 aa11.91□□□□□ -0.5
NPHP3-203ENST00000465756 NOC2LQ9Y3T9 749 aaKnown RBP11.91□□□□□ -0.5
NPHP3-203ENST00000465756 A0A087WZ62 844 aa11.9□□□□□ -0.5
NPHP3-203ENST00000465756 IGKV6-21A0A0C4DH24 114 aa11.9□□□□□ -0.5
NPHP3-203ENST00000465756 ARHGEF37A1IGU5 675 aa11.9□□□□□ -0.5
NPHP3-203ENST00000465756 SPTLC2O15270 562 aa11.9□□□□□ -0.5
NPHP3-203ENST00000465756 ITGA4P13612 1032 aa11.9□□□□□ -0.5
NPHP3-203ENST00000465756 NPEPPSP55786 919 aa11.9□□□□□ -0.5
NPHP3-203ENST00000465756 MARCH8Q5T0T0 291 aa11.9□□□□□ -0.5
NPHP3-203ENST00000465756 BICD1Q96G01 975 aa11.9□□□□□ -0.5
NPHP3-203ENST00000465756 FDXACB1Q9BRP7 624 aaPredicted RBP11.9□□□□□ -0.5
NPHP3-203ENST00000465756 PBX4Q9BYU1 374 aa11.9□□□□□ -0.5
NPHP3-203ENST00000465756 BHMT2Q9H2M3 363 aa11.9□□□□□ -0.5
NPHP3-203ENST00000465756 ZHX3Q9H4I2 956 aa11.9□□□□□ -0.5
NPHP3-203ENST00000465756 RGS18Q9NS28 235 aa11.9□□□□□ -0.5
NPHP3-203ENST00000465756 ADGRA3Q8IWK6 1321 aa11.9□□□□□ -0.5
NPHP3-203ENST00000465756 ANO5Q75V66 913 aa11.9□□□□□ -0.5
NPHP3-203ENST00000465756 CATSPER3Q86XQ3 398 aa11.9□□□□□ -0.5
NPHP3-203ENST00000465756 IGSF22Q8N9C0 903 aa11.9□□□□□ -0.5
NPHP3-203ENST00000465756 ZNF558Q96NG5 402 aa11.9□□□□□ -0.5
NPHP3-203ENST00000465756 TCHPQ9BT92 498 aa11.9□□□□□ -0.5
NPHP3-203ENST00000465756 CCDC94Q9BW85 323 aaPredicted RBP11.9□□□□□ -0.5
NPHP3-203ENST00000465756 NFKBIZQ9BYH8 718 aa11.9□□□□□ -0.5
NPHP3-203ENST00000465756 CCSER1Q9C0I3 900 aa11.9□□□□□ -0.5
NPHP3-203ENST00000465756 KMT5AQ9NQR1 393 aa11.9□□□□□ -0.5
NPHP3-203ENST00000465756 TOPORSQ9NS56 1045 aaPredicted RBP11.9□□□□□ -0.5
NPHP3-203ENST00000465756 LTBP2Q14767 1821 aa11.9□□□□□ -0.5
NPHP3-203ENST00000465756 ZMYM2Q9UBW7 1377 aa11.9□□□□□ -0.5
NPHP3-203ENST00000465756 UBE3AQ05086 875 aa11.9□□□□□ -0.5
NPHP3-203ENST00000465756 CEP57L1Q8IYX8 460 aa11.9□□□□□ -0.5
NPHP3-203ENST00000465756 TMEM143Q96AN5 459 aa11.9□□□□□ -0.5
NPHP3-203ENST00000465756 PPP1R16BQ96T49 567 aa11.9□□□□□ -0.5
NPHP3-203ENST00000465756 TBKBP1A7MCY6 615 aa11.89□□□□□ -0.51
NPHP3-203ENST00000465756 K7ERI5 159 aa11.89□□□□□ -0.51
NPHP3-203ENST00000465756 F13A1P00488 732 aa11.89□□□□□ -0.51
NPHP3-203ENST00000465756 ME1P48163 572 aa11.89□□□□□ -0.51
NPHP3-203ENST00000465756 CCDC65Q8IXS2 484 aa11.89□□□□□ -0.51
NPHP3-203ENST00000465756 PIGOQ8TEQ8 1089 aa11.89□□□□□ -0.51
NPHP3-203ENST00000465756 MRPL4Q9BYD3 311 aaKnown RBP11.89□□□□□ -0.51
NPHP3-203ENST00000465756 GZF1Q9H116 711 aaPredicted RBP11.89□□□□□ -0.51
NPHP3-203ENST00000465756 SEL1LQ9UBV2 794 aa11.89□□□□□ -0.51
NPHP3-203ENST00000465756 DPP7Q9UHL4 492 aa11.89□□□□□ -0.51
NPHP3-203ENST00000465756 TANC1Q9C0D5 1861 aa11.89□□□□□ -0.51
NPHP3-203ENST00000465756 PPP6R2O75170 966 aa11.89□□□□□ -0.51
NPHP3-203ENST00000465756 ATP4AP20648 1035 aa11.89□□□□□ -0.51
NPHP3-203ENST00000465756 PTENP60484 403 aa11.89□□□□□ -0.51
NPHP3-203ENST00000465756 EARS2Q5JPH6 523 aaKnown RBP11.89□□□□□ -0.51
NPHP3-203ENST00000465756 IQUBQ8NA54 791 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms