RNA–Protein interactions for RNA: ENST00000465655.2

RPL39P28-201, Transcript of ribosomal protein L39 pseudogene 28, humanhuman

BASIC

Gene RPL39P28, Length 155 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P28-201ENST00000465655 RNF169Q8NCN4 708 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 LRRN4CLQ8ND94 238 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 ZNF540Q8NDQ6 660 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 SUPT20HQ8NEM7 779 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 IPMKQ8NFU5 416 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 OR6P1Q8NGX9 317 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 DDX55Q8NHQ9 600 aaKnown RBP eCLIP0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 DNAJB8Q8NHS0 232 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 MYCBPAPQ8TBZ2 947 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 URGCPQ8TCY9 931 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 BCAS4Q8TDM0 211 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 LRRC8CQ8TDW0 803 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 FBXO41Q8TF61 875 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 GRK7Q8WTQ7 553 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 LEO1Q8WVC0 666 aaPredicted RBP0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 CPLX3Q8WVH0 158 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 CAPSLQ8WWF8 208 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 RUFY2Q8WXA3 655 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 IFT81Q8WYA0 676 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 POMGNT1Q8WZA1 660 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 STARD8Q92502 1023 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 HDAC2Q92769 488 aaKnown RBP0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 DPF3Q92784 378 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 INPP5DQ92835 1189 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 TNFRSF25Q93038 417 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 EXT2Q93063 718 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 RILPL2Q969X0 211 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 KIAA1143Q96AT1 154 aaPredicted RBP0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 FAM149B1Q96BN6 582 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 SGK3Q96BR1 496 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 SDCCAG3Q96C92 435 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 INTS12Q96CB8 462 aaKnown RBP0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 TIFAQ96CG3 184 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 NMD3Q96D46 503 aaKnown RBP0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 RMDN1Q96DB5 314 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 ERLEC1Q96DZ1 483 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 MTMR8Q96EF0 704 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 THAP11Q96EK4 314 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 GIMAP5Q96F15 307 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 ACSBG1Q96GR2 724 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 SNF8Q96H20 258 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 MED30Q96HR3 178 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 ZNF845Q96IR2 970 aaPredicted RBP0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 ANKRD36BP1Q96IX9 119 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 RADILQ96JH8 1075 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 L3MBTL3Q96JM7 780 aaPredicted RBP0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 ARL5BQ96KC2 179 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 TNIP3Q96KP6 325 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 FAM167AQ96KS9 214 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 CAPZA3Q96KX2 299 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 TBATAQ96M53 351 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 NSMCE3Q96MG7 304 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 FAM20AQ96MK3 541 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 ZNF570Q96NI8 536 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 SAMD11Q96NU1 681 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 CLIC6Q96NY7 704 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 NLRP3Q96P20 1036 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 SLC2A13Q96QE2 648 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 WDR24Q96S15 920 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 PPP1R16BQ96T49 567 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 SEC62Q99442 399 aaKnown RBP0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 GMLQ99445 158 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 MNTQ99583 582 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 CIB1Q99828 191 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 SH3GL2Q99962 352 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 C7orf25Q9BPX7 421 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 DDX50Q9BQ39 737 aaKnown RBP0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 LPIN3Q9BQK8 851 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 HEPHQ9BQS7 1158 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 SDF4Q9BRK5 362 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 AIFM2Q9BRQ8 373 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 LLPHQ9BRT6 129 aaKnown RBP0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 CENPKQ9BS16 269 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 TSEN34Q9BSV6 310 aaKnown RBP0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 CNPY3Q9BT09 278 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 TRIM62Q9BVG3 475 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 PHF20Q9BVI0 1012 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 NUP58Q9BVL2 599 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 NUP85Q9BW27 656 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 CCDC106Q9BWC9 280 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 APOL5Q9BWW9 433 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 CARD6Q9BX69 1037 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 BBS2Q9BXC9 721 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 HEMGNQ9BXL5 484 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 NUSAP1Q9BXS6 441 aaKnown RBP0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 TDRD1Q9BXT4 1180 aaKnown RBP0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 CALN1Q9BXU9 219 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 RTFDC1Q9BY42 306 aaPredicted RBP0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 FUT8Q9BYC5 575 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 MRPL1Q9BYD6 325 aaKnown RBP0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 SHCBP1LQ9BZQ2 653 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 KRT23Q9C075 422 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 BRINP2Q9C0B6 783 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 SRCIN1Q9C0H9 1055 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 NAT10Q9H0A0 1025 aaKnown RBP0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 KIAA1683Q9H0B3 1180 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 NT5C3AQ9H0P0 336 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 VPS16Q9H269 839 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 EPC1Q9H2F5 836 aa0.97□□□□□ -2.25
RPL39P28-201ENST00000465655 RHBGQ9H310 441 aa0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms