RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 C1orf186Q6ZWK4 172 aa22.56■■□□□ 1.2
SKA3-205ENST00000465471 RTN4RL1Q86UN2 441 aaPredicted RBP22.56■■□□□ 1.2
SKA3-205ENST00000465471 HERC6Q8IVU3 1022 aa22.56■■□□□ 1.2
SKA3-205ENST00000465471 LRCH3Q96II8 777 aa22.56■■□□□ 1.2
SKA3-205ENST00000465471 SCLT1Q96NL6 688 aa22.56■■□□□ 1.2
SKA3-205ENST00000465471 RUSC1Q9BVN2 902 aa22.56■■□□□ 1.2
SKA3-205ENST00000465471 NFKBIZQ9BYH8 718 aa22.56■■□□□ 1.2
SKA3-205ENST00000465471 ATP6V1DQ9Y5K8 247 aa22.56■■□□□ 1.2
SKA3-205ENST00000465471 ENPP3O14638 875 aa22.55■■□□□ 1.2
SKA3-205ENST00000465471 MGEA5O60502 916 aa22.55■■□□□ 1.2
SKA3-205ENST00000465471 CUTAO60888 179 aa22.55■■□□□ 1.2
SKA3-205ENST00000465471 PLA2G4BP0C869 781 aa22.55■■□□□ 1.2
SKA3-205ENST00000465471 NFX1Q12986 1120 aaKnown RBP22.55■■□□□ 1.2
SKA3-205ENST00000465471 DSC3Q14574 896 aa22.55■■□□□ 1.2
SKA3-205ENST00000465471 GPR153Q6NV75 609 aa22.55■■□□□ 1.2
SKA3-205ENST00000465471 SRGAP1Q7Z6B7 1085 aa22.55■■□□□ 1.2
SKA3-205ENST00000465471 RNF149Q8NC42 400 aa22.55■■□□□ 1.2
SKA3-205ENST00000465471 CHAMP1Q96JM3 812 aa22.55■■□□□ 1.2
SKA3-205ENST00000465471 PBX4Q9BYU1 374 aa22.55■■□□□ 1.2
SKA3-205ENST00000465471 INO80BQ9C086 356 aaPredicted RBP22.55■■□□□ 1.2
SKA3-205ENST00000465471 AMHP03971 560 aa22.54■■□□□ 1.2
SKA3-205ENST00000465471 SRGAP2CP0DJJ0 459 aa22.54■■□□□ 1.2
SKA3-205ENST00000465471 GUCY2CP25092 1073 aa22.54■■□□□ 1.2
SKA3-205ENST00000465471 PTENP60484 403 aa22.54■■□□□ 1.2
SKA3-205ENST00000465471 KRT85P78386 507 aa22.54■■□□□ 1.2
SKA3-205ENST00000465471 FAM102BQ5T8I3 360 aa22.54■■□□□ 1.2
SKA3-205ENST00000465471 MAEAQ7L5Y9 396 aa22.54■■□□□ 1.2
SKA3-205ENST00000465471 DAW1Q8N136 415 aa22.54■■□□□ 1.2
SKA3-205ENST00000465471 CRIPAKQ8N1N5 446 aa22.54■■□□□ 1.2
SKA3-205ENST00000465471 BSNDQ8WZ55 320 aa22.54■■□□□ 1.2
SKA3-205ENST00000465471 RAD54LQ92698 747 aa22.54■■□□□ 1.2
SKA3-205ENST00000465471 TOP1MTQ969P6 601 aa22.54■■□□□ 1.2
SKA3-205ENST00000465471 MINDY3Q9H8M7 445 aa22.54■■□□□ 1.2
SKA3-205ENST00000465471 KCND2Q9NZV8 630 aa22.54■■□□□ 1.2
SKA3-205ENST00000465471 COL4A6Q14031 1691 aa22.54■■□□□ 1.2
SKA3-205ENST00000465471 CSDE1O75534 798 aaKnown RBP22.53■■□□□ 1.2
SKA3-205ENST00000465471 GJB5O95377 273 aa22.53■■□□□ 1.2
SKA3-205ENST00000465471 FGFR4P22455 802 aa22.53■■□□□ 1.2
SKA3-205ENST00000465471 SFPQP23246 707 aaKnown RBP eCLIP22.53■■□□□ 1.2
SKA3-205ENST00000465471 TXLNAP40222 546 aa22.53■■□□□ 1.2
SKA3-205ENST00000465471 PHKA2P46019 1235 aa22.53■■□□□ 1.2
SKA3-205ENST00000465471 MAPK7Q13164 816 aa22.53■■□□□ 1.2
SKA3-205ENST00000465471 TFDP1Q14186 410 aa22.53■■□□□ 1.2
SKA3-205ENST00000465471 NAALADL2Q58DX5 795 aa22.53■■□□□ 1.2
SKA3-205ENST00000465471 CDCA2Q69YH5 1023 aaPredicted RBP22.53■■□□□ 1.2
SKA3-205ENST00000465471 SHC4Q6S5L8 630 aa22.53■■□□□ 1.2
SKA3-205ENST00000465471 TMCO2Q7Z6W1 182 aaPredicted RBP22.53■■□□□ 1.2
SKA3-205ENST00000465471 LEO1Q8WVC0 666 aaPredicted RBP22.53■■□□□ 1.2
SKA3-205ENST00000465471 KIFAP3Q92845 792 aa22.53■■□□□ 1.2
SKA3-205ENST00000465471 TIPINQ9BVW5 301 aa22.53■■□□□ 1.2
SKA3-205ENST00000465471 STK17AQ9UEE5 414 aa22.53■■□□□ 1.2
SKA3-205ENST00000465471 CCDC39Q9UFE4 941 aa22.53■■□□□ 1.2
SKA3-205ENST00000465471 PCDHA7Q9UN72 937 aa22.53■■□□□ 1.2
SKA3-205ENST00000465471 PCDHA11Q9Y5I1 949 aa22.53■■□□□ 1.2
SKA3-205ENST00000465471 CHD9Q3L8U1 2897 aa22.53■■□□□ 1.2
SKA3-205ENST00000465471 A0A087X0B3 334 aa22.52■■□□□ 1.2
SKA3-205ENST00000465471 PBX2P40425 430 aa22.52■■□□□ 1.2
SKA3-205ENST00000465471 RAB30Q15771 203 aa22.52■■□□□ 1.2
SKA3-205ENST00000465471 MYOCDQ8IZQ8 938 aa22.52■■□□□ 1.2
SKA3-205ENST00000465471 RASSF8Q8NHQ8 419 aa22.52■■□□□ 1.2
SKA3-205ENST00000465471 RGS18Q9NS28 235 aa22.52■■□□□ 1.2
SKA3-205ENST00000465471 CIZ1Q9ULV3 898 aaPredicted RBP22.52■■□□□ 1.2
SKA3-205ENST00000465471 YBX2Q9Y2T7 364 aaKnown RBP22.52■■□□□ 1.2
SKA3-205ENST00000465471 HIP1RO75146 1068 aa22.51■■□□□ 1.19
SKA3-205ENST00000465471 DNAJB2P25686 324 aa22.51■■□□□ 1.19
SKA3-205ENST00000465471 RABGGTBP53611 331 aa22.51■■□□□ 1.19
SKA3-205ENST00000465471 HTRA4P83105 476 aaPredicted RBP22.51■■□□□ 1.19
SKA3-205ENST00000465471 MBTD1Q05BQ5 628 aa22.51■■□□□ 1.19
SKA3-205ENST00000465471 PCBP1Q15365 356 aaKnown RBP eCLIP22.51■■□□□ 1.19
SKA3-205ENST00000465471 ARSHQ5FYA8 562 aa22.51■■□□□ 1.19
SKA3-205ENST00000465471 LARP4BQ92615 738 aaKnown RBP22.51■■□□□ 1.19
SKA3-205ENST00000465471 ADAM2Q99965 735 aa22.51■■□□□ 1.19
SKA3-205ENST00000465471 C1orf112Q9NSG2 853 aa22.51■■□□□ 1.19
SKA3-205ENST00000465471 TMEM265A0A087WTH1 108 aa22.5■■□□□ 1.19
SKA3-205ENST00000465471 C9IYK1 514 aa22.5■■□□□ 1.19
SKA3-205ENST00000465471 SSBP05455 408 aaKnown RBP eCLIP22.5■■□□□ 1.19
SKA3-205ENST00000465471 NAMPTP43490 491 aa22.5■■□□□ 1.19
SKA3-205ENST00000465471 ME1P48163 572 aa22.5■■□□□ 1.19
SKA3-205ENST00000465471 MCM6Q14566 821 aa22.5■■□□□ 1.19
SKA3-205ENST00000465471 CCDC73Q6ZRK6 1079 aa22.5■■□□□ 1.19
SKA3-205ENST00000465471 DRC1Q96MC2 740 aa22.5■■□□□ 1.19
SKA3-205ENST00000465471 RC3H2Q9HBD1 1191 aaKnown RBP22.5■■□□□ 1.19
SKA3-205ENST00000465471 CHST12Q9NRB3 414 aa22.5■■□□□ 1.19
SKA3-205ENST00000465471 AGPAT5Q9NUQ2 364 aa22.5■■□□□ 1.19
SKA3-205ENST00000465471 MYH11P35749 1972 aa22.5■■□□□ 1.19
SKA3-205ENST00000465471 DENND3A2RUS2 1198 aa22.49■■□□□ 1.19
SKA3-205ENST00000465471 SARSP49591 514 aaKnown RBP22.49■■□□□ 1.19
SKA3-205ENST00000465471 FAM189BP81408 668 aa22.49■■□□□ 1.19
SKA3-205ENST00000465471 PPP2R5AQ15172 486 aa22.49■■□□□ 1.19
SKA3-205ENST00000465471 E2F4Q16254 413 aa22.49■■□□□ 1.19
SKA3-205ENST00000465471 AMHR2Q16671 573 aa22.49■■□□□ 1.19
SKA3-205ENST00000465471 RRAGBQ5VZM2 374 aa22.49■■□□□ 1.19
SKA3-205ENST00000465471 RESP18Q5W5W9 173 aa22.49■■□□□ 1.19
SKA3-205ENST00000465471 SLC24A5Q71RS6 500 aa22.49■■□□□ 1.19
SKA3-205ENST00000465471 CATSPER4Q7RTX7 472 aa22.49■■□□□ 1.19
SKA3-205ENST00000465471 SPATA32Q96LK8 384 aa22.49■■□□□ 1.19
SKA3-205ENST00000465471 RAD9AQ99638 391 aa22.49■■□□□ 1.19
SKA3-205ENST00000465471 TRAIPQ9BWF2 469 aa22.49■■□□□ 1.19
SKA3-205ENST00000465471 SCAND2PQ9GZW5 306 aaPredicted RBP22.49■■□□□ 1.19
SKA3-205ENST00000465471 C17orf75Q9HAS0 396 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms