RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 PLAGL2Q9UPG8 496 aa15.43■□□□□ 0.06
HDAC6-215ENST00000465457 MRPL42Q9Y6G3 142 aaKnown RBP15.43■□□□□ 0.06
HDAC6-215ENST00000465457 ABCB11O95342 1321 aa15.43■□□□□ 0.06
HDAC6-215ENST00000465457 PRR23AA6NEV1 266 aa15.42■□□□□ 0.06
HDAC6-215ENST00000465457 SMTNL1A8MU46 457 aa15.42■□□□□ 0.06
HDAC6-215ENST00000465457 ACTN4O43707 911 aaKnown RBP15.42■□□□□ 0.06
HDAC6-215ENST00000465457 CCNT1O60563 726 aaKnown RBP15.42■□□□□ 0.06
HDAC6-215ENST00000465457 PPP1R11O60927 126 aaPredicted RBP15.42■□□□□ 0.06
HDAC6-215ENST00000465457 EIF3JO75822 258 aaKnown RBP15.42■□□□□ 0.06
HDAC6-215ENST00000465457 LGALS2P05162 132 aa15.42■□□□□ 0.06
HDAC6-215ENST00000465457 ITGB1P05556 798 aa15.42■□□□□ 0.06
HDAC6-215ENST00000465457 MYL1P05976 194 aa15.42■□□□□ 0.06
HDAC6-215ENST00000465457 GHRP10912 638 aa15.42■□□□□ 0.06
HDAC6-215ENST00000465457 MYCLP12524 364 aaPredicted RBP15.42■□□□□ 0.06
HDAC6-215ENST00000465457 SP100P23497 879 aaPredicted RBP15.42■□□□□ 0.06
HDAC6-215ENST00000465457 NRIP1P48552 1158 aa15.42■□□□□ 0.06
HDAC6-215ENST00000465457 COASYQ13057 564 aa15.42■□□□□ 0.06
HDAC6-215ENST00000465457 TMEM266Q2M3C6 531 aa15.42■□□□□ 0.06
HDAC6-215ENST00000465457 LETM2Q2VYF4 491 aa15.42■□□□□ 0.06
HDAC6-215ENST00000465457 MOXD1Q6UVY6 613 aa15.42■□□□□ 0.06
HDAC6-215ENST00000465457 VN1R2Q8NFZ6 395 aa15.42■□□□□ 0.06
HDAC6-215ENST00000465457 LINC01599Q8WXQ3 324 aa15.42■□□□□ 0.06
HDAC6-215ENST00000465457 SMARCE1Q969G3 411 aa15.42■□□□□ 0.06
HDAC6-215ENST00000465457 CCSER1Q9C0I3 900 aa15.42■□□□□ 0.06
HDAC6-215ENST00000465457 SETD4Q9NVD3 440 aa15.42■□□□□ 0.06
HDAC6-215ENST00000465457 FNDC1Q4ZHG4 1894 aaPredicted RBP15.42■□□□□ 0.06
HDAC6-215ENST00000465457 H3BRB1 525 aa15.41■□□□□ 0.06
HDAC6-215ENST00000465457 WNT7AO00755 349 aa15.41■□□□□ 0.06
HDAC6-215ENST00000465457 SLC26A4O43511 780 aa15.41■□□□□ 0.06
HDAC6-215ENST00000465457 PPFIA4O75335 1185 aa15.41■□□□□ 0.06
HDAC6-215ENST00000465457 CFBP00751 764 aa15.41■□□□□ 0.06
HDAC6-215ENST00000465457 CHRNA1P02708 482 aa15.41■□□□□ 0.06
HDAC6-215ENST00000465457 TPM3P06753 285 aa15.41■□□□□ 0.06
HDAC6-215ENST00000465457 BTG3Q14201 252 aaPredicted RBP15.41■□□□□ 0.06
HDAC6-215ENST00000465457 IQCB1Q15051 598 aa15.41■□□□□ 0.06
HDAC6-215ENST00000465457 JAKMIP3Q5VZ66 844 aa15.41■□□□□ 0.06
HDAC6-215ENST00000465457 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.41■□□□□ 0.06
HDAC6-215ENST00000465457 EFHBQ8N7U6 833 aa15.41■□□□□ 0.06
HDAC6-215ENST00000465457 ZNF689Q96CS4 500 aaPredicted RBP15.41■□□□□ 0.06
HDAC6-215ENST00000465457 PDCD2LQ9BRP1 358 aa15.41■□□□□ 0.06
HDAC6-215ENST00000465457 TUT1Q9H6E5 874 aaKnown RBP15.41■□□□□ 0.06
HDAC6-215ENST00000465457 SERTAD1Q9UHV2 236 aa15.41■□□□□ 0.06
HDAC6-215ENST00000465457 GOLGA6L6A8MZA4 724 aa15.4■□□□□ 0.06
HDAC6-215ENST00000465457 PROB1E7EW31 1015 aa15.4■□□□□ 0.06
HDAC6-215ENST00000465457 IKBKBO14920 756 aa15.4■□□□□ 0.06
HDAC6-215ENST00000465457 ADAMTS3O15072 1205 aa15.4■□□□□ 0.06
HDAC6-215ENST00000465457 UBA7P41226 1012 aa15.4■□□□□ 0.06
HDAC6-215ENST00000465457 USP11P51784 963 aa15.4■□□□□ 0.06
HDAC6-215ENST00000465457 SPECC1Q5M775 1068 aa15.4■□□□□ 0.06
HDAC6-215ENST00000465457 SARM1Q6SZW1 724 aa15.4■□□□□ 0.06
HDAC6-215ENST00000465457 RUFY4Q6ZNE9 571 aa15.4■□□□□ 0.06
HDAC6-215ENST00000465457 C11orf57Q6ZUT1 292 aaPredicted RBP15.4■□□□□ 0.06
HDAC6-215ENST00000465457 LUZP1Q86V48 1076 aa15.4■□□□□ 0.06
HDAC6-215ENST00000465457 MLKLQ8NB16 471 aa15.4■□□□□ 0.06
HDAC6-215ENST00000465457 SPATA20Q8TB22 786 aa15.4■□□□□ 0.06
HDAC6-215ENST00000465457 SPPL3Q8TCT6 385 aa15.4■□□□□ 0.06
HDAC6-215ENST00000465457 LMBR1Q8WVP7 490 aa15.4■□□□□ 0.06
HDAC6-215ENST00000465457 APBB2Q92870 758 aa15.4■□□□□ 0.06
HDAC6-215ENST00000465457 DHX58Q96C10 678 aa15.4■□□□□ 0.06
HDAC6-215ENST00000465457 GSDMAQ96QA5 445 aa15.4■□□□□ 0.06
HDAC6-215ENST00000465457 PHF7Q9BWX1 381 aaPredicted RBP15.4■□□□□ 0.06
HDAC6-215ENST00000465457 GTPBP4Q9BZE4 634 aaKnown RBP15.4■□□□□ 0.06
HDAC6-215ENST00000465457 SMOC2Q9H3U7 446 aa15.4■□□□□ 0.06
HDAC6-215ENST00000465457 CDH22Q9UJ99 828 aa15.4■□□□□ 0.06
HDAC6-215ENST00000465457 ZNF292O60281 2723 aa15.4■□□□□ 0.06
HDAC6-215ENST00000465457 NCOR2Q9Y618 2525 aa15.4■□□□□ 0.06
HDAC6-215ENST00000465457 EP300Q09472 2414 aaPredicted RBP15.39■□□□□ 0.05
HDAC6-215ENST00000465457 PIK3CDO00329 1044 aa15.39■□□□□ 0.05
HDAC6-215ENST00000465457 CAND2O75155 1236 aa15.39■□□□□ 0.05
HDAC6-215ENST00000465457 ADCY5O95622 1261 aa15.39■□□□□ 0.05
HDAC6-215ENST00000465457 ARP10275 920 aa15.39■□□□□ 0.05
HDAC6-215ENST00000465457 HOXA13P31271 388 aaPredicted RBP15.39■□□□□ 0.05
HDAC6-215ENST00000465457 ICAM3P32942 547 aa15.39■□□□□ 0.05
HDAC6-215ENST00000465457 GATMP50440 423 aa15.39■□□□□ 0.05
HDAC6-215ENST00000465457 FXR2P51116 673 aaKnown RBP eCLIP15.39■□□□□ 0.05
HDAC6-215ENST00000465457 PNOCQ13519 176 aa15.39■□□□□ 0.05
HDAC6-215ENST00000465457 LPIN1Q14693 890 aa15.39■□□□□ 0.05
HDAC6-215ENST00000465457 CALCRLQ16602 461 aa15.39■□□□□ 0.05
HDAC6-215ENST00000465457 PTPN21Q16825 1174 aa15.39■□□□□ 0.05
HDAC6-215ENST00000465457 DPCR1Q3MIW9 517 aa15.39■□□□□ 0.05
HDAC6-215ENST00000465457 PAN2Q504Q3 1202 aaKnown RBP15.39■□□□□ 0.05
HDAC6-215ENST00000465457 PDILTQ8N807 584 aa15.39■□□□□ 0.05
HDAC6-215ENST00000465457 TMEM105Q8N8V8 129 aa15.39■□□□□ 0.05
HDAC6-215ENST00000465457 KLHL23Q8NBE8 558 aa15.39■□□□□ 0.05
HDAC6-215ENST00000465457 EPSTI1Q96J88 318 aa15.39■□□□□ 0.05
HDAC6-215ENST00000465457 EHMT1Q9H9B1 1298 aa15.39■□□□□ 0.05
HDAC6-215ENST00000465457 DISC1Q9NRI5 854 aa15.39■□□□□ 0.05
HDAC6-215ENST00000465457 RMND1Q9NWS8 449 aa15.39■□□□□ 0.05
HDAC6-215ENST00000465457 TMEM260Q9NX78 707 aa15.39■□□□□ 0.05
HDAC6-215ENST00000465457 RWDD3Q9Y3V2 267 aa15.39■□□□□ 0.05
HDAC6-215ENST00000465457 PCDHA5Q9Y5H7 936 aa15.39■□□□□ 0.05
HDAC6-215ENST00000465457 PER2O15055 1255 aa15.38■□□□□ 0.05
HDAC6-215ENST00000465457 DGKIO75912 1065 aa15.38■□□□□ 0.05
HDAC6-215ENST00000465457 STAT6P42226 847 aa15.38■□□□□ 0.05
HDAC6-215ENST00000465457 SARSP49591 514 aaKnown RBP15.38■□□□□ 0.05
HDAC6-215ENST00000465457 HSD17B4P51659 736 aa15.38■□□□□ 0.05
HDAC6-215ENST00000465457 ADAM17P78536 824 aa15.38■□□□□ 0.05
HDAC6-215ENST00000465457 MGAT3Q09327 533 aa15.38■□□□□ 0.05
HDAC6-215ENST00000465457 PDIA5Q14554 519 aa15.38■□□□□ 0.05
HDAC6-215ENST00000465457 PGM5Q15124 567 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms