RNA–Protein interactions for RNA: ENST00000465408.1

UBE4B-205, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-205ENST00000465408 IER5LQ5T953 404 aa9.13□□□□□ -0.95
UBE4B-205ENST00000465408 FOXR2Q6PJQ5 311 aa9.13□□□□□ -0.95
UBE4B-205ENST00000465408 C1orf186Q6ZWK4 172 aa9.13□□□□□ -0.95
UBE4B-205ENST00000465408 GPIHBP1Q8IV16 184 aa9.13□□□□□ -0.95
UBE4B-205ENST00000465408 MYCT1Q8N699 235 aa9.13□□□□□ -0.95
UBE4B-205ENST00000465408 SAMD3Q8N6K7 520 aa9.13□□□□□ -0.95
UBE4B-205ENST00000465408 ACRBPQ8NEB7 543 aa9.13□□□□□ -0.95
UBE4B-205ENST00000465408 NEK9Q8TD19 979 aa9.13□□□□□ -0.95
UBE4B-205ENST00000465408 SMCR8Q8TEV9 937 aaPredicted RBP9.13□□□□□ -0.95
UBE4B-205ENST00000465408 ATRIPQ8WXE1 791 aa9.13□□□□□ -0.95
UBE4B-205ENST00000465408 CEP63Q96MT8 703 aa9.13□□□□□ -0.95
UBE4B-205ENST00000465408 NAA15Q9BXJ9 866 aaKnown RBP9.13□□□□□ -0.95
UBE4B-205ENST00000465408 TEX13BQ9BXU2 312 aa9.13□□□□□ -0.95
UBE4B-205ENST00000465408 IKZF4Q9H2S9 585 aa9.13□□□□□ -0.95
UBE4B-205ENST00000465408 NDST4Q9H3R1 872 aa9.13□□□□□ -0.95
UBE4B-205ENST00000465408 ACAD9Q9H845 621 aa9.13□□□□□ -0.95
UBE4B-205ENST00000465408 CAPN11Q9UMQ6 739 aa9.13□□□□□ -0.95
UBE4B-205ENST00000465408 COG5Q9UP83 839 aa9.13□□□□□ -0.95
UBE4B-205ENST00000465408 LUC7L2Q9Y383 392 aaKnown RBP9.13□□□□□ -0.95
UBE4B-205ENST00000465408 SAMM50Q9Y512 469 aa9.13□□□□□ -0.95
UBE4B-205ENST00000465408 COL4A3BPQ9Y5P4 624 aa9.13□□□□□ -0.95
UBE4B-205ENST00000465408 ADGRG1Q9Y653 693 aa9.13□□□□□ -0.95
UBE4B-205ENST00000465408 PRRC2BQ5JSZ5 2229 aaKnown RBP9.13□□□□□ -0.95
UBE4B-205ENST00000465408 CACNA1HO95180 2353 aa9.12□□□□□ -0.95
UBE4B-205ENST00000465408 A0A0G2JMZ2 1700 aa9.12□□□□□ -0.95
UBE4B-205ENST00000465408 TMEM150BA6NC51 233 aa9.12□□□□□ -0.95
UBE4B-205ENST00000465408 HIP1RO75146 1068 aa9.12□□□□□ -0.95
UBE4B-205ENST00000465408 CCNE2O96020 404 aa9.12□□□□□ -0.95
UBE4B-205ENST00000465408 NR3C2P08235 984 aa9.12□□□□□ -0.95
UBE4B-205ENST00000465408 MUTP22033 750 aa9.12□□□□□ -0.95
UBE4B-205ENST00000465408 CACNB2Q08289 660 aaPredicted RBP9.12□□□□□ -0.95
UBE4B-205ENST00000465408 TCF15Q12870 199 aa9.12□□□□□ -0.95
UBE4B-205ENST00000465408 ACAP1Q15027 740 aa9.12□□□□□ -0.95
UBE4B-205ENST00000465408 TRIM60Q495X7 471 aa9.12□□□□□ -0.95
UBE4B-205ENST00000465408 ZC2HC1CQ53FD0 456 aaPredicted RBP9.12□□□□□ -0.95
UBE4B-205ENST00000465408 CYP26C1Q6V0L0 522 aa9.12□□□□□ -0.95
UBE4B-205ENST00000465408 MAEAQ7L5Y9 396 aa9.12□□□□□ -0.95
UBE4B-205ENST00000465408 NLRX1Q86UT6 975 aa9.12□□□□□ -0.95
UBE4B-205ENST00000465408 TMTC1Q8IUR5 882 aa9.12□□□□□ -0.95
UBE4B-205ENST00000465408 KSR1Q8IVT5 923 aa9.12□□□□□ -0.95
UBE4B-205ENST00000465408 ZC3H3Q8IXZ2 948 aaKnown RBP9.12□□□□□ -0.95
UBE4B-205ENST00000465408 GJD3Q8N144 294 aa9.12□□□□□ -0.95
UBE4B-205ENST00000465408 KCTD17Q8N5Z5 321 aa9.12□□□□□ -0.95
UBE4B-205ENST00000465408 CCDC155Q8N6L0 562 aa9.12□□□□□ -0.95
UBE4B-205ENST00000465408 OR8K1Q8NGG5 319 aa9.12□□□□□ -0.95
UBE4B-205ENST00000465408 KIF18AQ8NI77 898 aa9.12□□□□□ -0.95
UBE4B-205ENST00000465408 ERGIC2Q96RQ1 377 aa9.12□□□□□ -0.95
UBE4B-205ENST00000465408 CHP1Q99653 195 aa9.12□□□□□ -0.95
UBE4B-205ENST00000465408 TTYH3Q9C0H2 523 aa9.12□□□□□ -0.95
UBE4B-205ENST00000465408 ZSWIM4Q9H7M6 989 aa9.12□□□□□ -0.95
UBE4B-205ENST00000465408 A1CFQ9NQ94 594 aaKnown RBP9.12□□□□□ -0.95
UBE4B-205ENST00000465408 TBC1D22BQ9NU19 505 aa9.12□□□□□ -0.95
UBE4B-205ENST00000465408 CYP39A1Q9NYL5 469 aa9.12□□□□□ -0.95
UBE4B-205ENST00000465408 BTBD7Q9P203 1132 aa9.12□□□□□ -0.95
UBE4B-205ENST00000465408 TCEAL9Q9UHQ7 104 aa9.12□□□□□ -0.95
UBE4B-205ENST00000465408 DNAI1Q9UI46 699 aa9.12□□□□□ -0.95
UBE4B-205ENST00000465408 SIK3Q9Y2K2 1263 aa9.12□□□□□ -0.95
UBE4B-205ENST00000465408 PAXBP1Q9Y5B6 917 aa9.12□□□□□ -0.95
UBE4B-205ENST00000465408 PLXNB2O15031 1838 aa9.12□□□□□ -0.95
UBE4B-205ENST00000465408 RLFQ13129 1914 aa9.11□□□□□ -0.95
UBE4B-205ENST00000465408 ASTN1O14525 1302 aa9.11□□□□□ -0.95
UBE4B-205ENST00000465408 DMDP11532 3685 aa9.11□□□□□ -0.95
UBE4B-205ENST00000465408 FAM186AA6NE01 2351 aa9.11□□□□□ -0.95
UBE4B-205ENST00000465408 GPR179Q6PRD1 2367 aa9.11□□□□□ -0.95
UBE4B-205ENST00000465408 BACH1O14867 736 aa9.11□□□□□ -0.95
UBE4B-205ENST00000465408 ATP2A1O14983 1001 aa9.11□□□□□ -0.95
UBE4B-205ENST00000465408 CETN3O15182 167 aa9.11□□□□□ -0.95
UBE4B-205ENST00000465408 EPHB6O15197 1021 aa9.11□□□□□ -0.95
UBE4B-205ENST00000465408 CLIC2O15247 247 aa9.11□□□□□ -0.95
UBE4B-205ENST00000465408 CALUO43852 315 aaPredicted RBP9.11□□□□□ -0.95
UBE4B-205ENST00000465408 USO1O60763 962 aaKnown RBP9.11□□□□□ -0.95
UBE4B-205ENST00000465408 GNA14O95837 355 aa9.11□□□□□ -0.95
UBE4B-205ENST00000465408 P4HBP07237 508 aaKnown RBP9.11□□□□□ -0.95
UBE4B-205ENST00000465408 CCDC175P0C221 793 aa9.11□□□□□ -0.95
UBE4B-205ENST00000465408 TRIM21P19474 475 aaKnown RBP9.11□□□□□ -0.95
UBE4B-205ENST00000465408 NR2F2P24468 414 aa9.11□□□□□ -0.95
UBE4B-205ENST00000465408 QARSP47897 775 aaKnown RBP9.11□□□□□ -0.95
UBE4B-205ENST00000465408 ETF1P62495 437 aaKnown RBP9.11□□□□□ -0.95
UBE4B-205ENST00000465408 KCNA1Q09470 495 aa9.11□□□□□ -0.95
UBE4B-205ENST00000465408 MAPK7Q13164 816 aa9.11□□□□□ -0.95
UBE4B-205ENST00000465408 ADAM9Q13443 819 aa9.11□□□□□ -0.95
UBE4B-205ENST00000465408 KNOP1Q1ED39 458 aaKnown RBP9.11□□□□□ -0.95
UBE4B-205ENST00000465408 BMT2Q1RMZ1 405 aa9.11□□□□□ -0.95
UBE4B-205ENST00000465408 EDRF1Q3B7T1 1238 aa9.11□□□□□ -0.95
UBE4B-205ENST00000465408 XRRA1Q6P2D8 792 aa9.11□□□□□ -0.95
UBE4B-205ENST00000465408 TRIM65Q6PJ69 517 aa9.11□□□□□ -0.95
UBE4B-205ENST00000465408 PADI6Q6TGC4 694 aa9.11□□□□□ -0.95
UBE4B-205ENST00000465408 TRMT1LQ7Z2T5 733 aaKnown RBP9.11□□□□□ -0.95
UBE4B-205ENST00000465408 VSIG10LQ86VR7 867 aa9.11□□□□□ -0.95
UBE4B-205ENST00000465408 TRIM59Q8IWR1 403 aa9.11□□□□□ -0.95
UBE4B-205ENST00000465408 ANKRD13CQ8N6S4 541 aa9.11□□□□□ -0.95
UBE4B-205ENST00000465408 NSUN6Q8TEA1 469 aaKnown RBP9.11□□□□□ -0.95
UBE4B-205ENST00000465408 DNAJC7Q99615 494 aa9.11□□□□□ -0.95
UBE4B-205ENST00000465408 SH2D3AQ9BRG2 576 aa9.11□□□□□ -0.95
UBE4B-205ENST00000465408 PAGR1Q9BTK6 254 aa9.11□□□□□ -0.95
UBE4B-205ENST00000465408 NUP58Q9BVL2 599 aa9.11□□□□□ -0.95
UBE4B-205ENST00000465408 LSM14BQ9BX40 385 aaKnown RBP9.11□□□□□ -0.95
UBE4B-205ENST00000465408 NKX2-4Q9H2Z4 354 aa9.11□□□□□ -0.95
UBE4B-205ENST00000465408 MMRN2Q9H8L6 949 aa9.11□□□□□ -0.95
UBE4B-205ENST00000465408 PARVGQ9HBI0 331 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms