RNA–Protein interactions for RNA: ENST00000465167.1

SSBP1-204, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 517 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-204ENST00000465167 PDLIM7Q9NR12 457 aa6.81□□□□□ -1.32
SSBP1-204ENST00000465167 TOMM22Q9NS69 142 aa6.81□□□□□ -1.32
SSBP1-204ENST00000465167 HOMER2Q9NSB8 354 aa6.81□□□□□ -1.32
SSBP1-204ENST00000465167 MTMR4Q9NYA4 1195 aa6.81□□□□□ -1.32
SSBP1-204ENST00000465167 STX8Q9UNK0 236 aa6.81□□□□□ -1.32
SSBP1-204ENST00000465167 PCDHGC5Q9Y5F6 944 aa6.81□□□□□ -1.32
SSBP1-204ENST00000465167 MRVI1Q9Y6F6 885 aa6.81□□□□□ -1.32
SSBP1-204ENST00000465167 PLIN4Q96Q06 1357 aa6.81□□□□□ -1.32
SSBP1-204ENST00000465167 MKI67P46013 3256 aaKnown RBP6.81□□□□□ -1.32
SSBP1-204ENST00000465167 SYNRGQ9UMZ2 1314 aa6.8□□□□□ -1.32
SSBP1-204ENST00000465167 A0A0U1RQG5 324 aaPredicted RBP6.8□□□□□ -1.32
SSBP1-204ENST00000465167 ASB14A6NK59 587 aa6.8□□□□□ -1.32
SSBP1-204ENST00000465167 TMEM232C9JQI7 657 aa6.8□□□□□ -1.32
SSBP1-204ENST00000465167 FAM229AH3BQW9 127 aa6.8□□□□□ -1.32
SSBP1-204ENST00000465167 ATP2A1O14983 1001 aa6.8□□□□□ -1.32
SSBP1-204ENST00000465167 DUSP11O75319 330 aaKnown RBP6.8□□□□□ -1.32
SSBP1-204ENST00000465167 ATE1O95260 518 aa6.8□□□□□ -1.32
SSBP1-204ENST00000465167 CHGBP05060 677 aa6.8□□□□□ -1.32
SSBP1-204ENST00000465167 ACLYP53396 1101 aa6.8□□□□□ -1.32
SSBP1-204ENST00000465167 SMAD3P84022 425 aaKnown RBP6.8□□□□□ -1.32
SSBP1-204ENST00000465167 TFAP4Q01664 338 aa6.8□□□□□ -1.32
SSBP1-204ENST00000465167 TLE2Q04725 743 aa6.8□□□□□ -1.32
SSBP1-204ENST00000465167 PPIGQ13427 754 aaKnown RBP eCLIP6.8□□□□□ -1.32
SSBP1-204ENST00000465167 ACVR2BQ13705 512 aa6.8□□□□□ -1.32
SSBP1-204ENST00000465167 KCNA10Q16322 511 aa6.8□□□□□ -1.32
SSBP1-204ENST00000465167 IGF2-ASQ6U949 168 aa6.8□□□□□ -1.32
SSBP1-204ENST00000465167 CCDC81Q6ZN84 652 aa6.8□□□□□ -1.32
SSBP1-204ENST00000465167 CCDC129Q6ZRS4 1044 aa6.8□□□□□ -1.32
SSBP1-204ENST00000465167 KIAA1211Q6ZU35 1233 aa6.8□□□□□ -1.32
SSBP1-204ENST00000465167 CYFIP1Q7L576 1253 aa6.8□□□□□ -1.32
SSBP1-204ENST00000465167 DPH6Q7L8W6 267 aa6.8□□□□□ -1.32
SSBP1-204ENST00000465167 ELMO3Q96BJ8 720 aa6.8□□□□□ -1.32
SSBP1-204ENST00000465167 FERD3LQ96RJ6 166 aa6.8□□□□□ -1.32
SSBP1-204ENST00000465167 TMPRSS13Q9BYE2 586 aa6.8□□□□□ -1.32
SSBP1-204ENST00000465167 AP5M1Q9H0R1 490 aa6.8□□□□□ -1.32
SSBP1-204ENST00000465167 ABHD16BQ9H3Z7 469 aa6.8□□□□□ -1.32
SSBP1-204ENST00000465167 SLC38A10Q9HBR0 1119 aa6.8□□□□□ -1.32
SSBP1-204ENST00000465167 RAD18Q9NS91 495 aa6.8□□□□□ -1.32
SSBP1-204ENST00000465167 PNMA2Q9UL42 364 aa6.8□□□□□ -1.32
SSBP1-204ENST00000465167 PCDHB14Q9Y5E9 798 aa6.8□□□□□ -1.32
SSBP1-204ENST00000465167 MCM3APO60318 1980 aa6.8□□□□□ -1.32
SSBP1-204ENST00000465167 BRCA2P51587 3418 aa6.8□□□□□ -1.32
SSBP1-204ENST00000465167 TMEM265A0A087WTH1 108 aa6.79□□□□□ -1.32
SSBP1-204ENST00000465167 B4DLN1 442 aa6.79□□□□□ -1.32
SSBP1-204ENST00000465167 SMIM22K7EJ46 135 aa6.79□□□□□ -1.32
SSBP1-204ENST00000465167 RANBP6O60518 1105 aaKnown RBP6.79□□□□□ -1.32
SSBP1-204ENST00000465167 ZNF865P0CJ78 1059 aaPredicted RBP6.79□□□□□ -1.32
SSBP1-204ENST00000465167 IMPDH2P12268 514 aa6.79□□□□□ -1.32
SSBP1-204ENST00000465167 ALAS1P13196 640 aa6.79□□□□□ -1.32
SSBP1-204ENST00000465167 FOSL2P15408 326 aa6.79□□□□□ -1.32
SSBP1-204ENST00000465167 TAL1P17542 331 aaPredicted RBP6.79□□□□□ -1.32
SSBP1-204ENST00000465167 NCLP19338 710 aaKnown RBP6.79□□□□□ -1.32
SSBP1-204ENST00000465167 CST5P28325 142 aaPredicted RBP6.79□□□□□ -1.32
SSBP1-204ENST00000465167 GIPRP48546 466 aa6.79□□□□□ -1.32
SSBP1-204ENST00000465167 MRPL12P52815 198 aaKnown RBP6.79□□□□□ -1.32
SSBP1-204ENST00000465167 RING1Q06587 406 aa6.79□□□□□ -1.32
SSBP1-204ENST00000465167 SHHQ15465 462 aa6.79□□□□□ -1.32
SSBP1-204ENST00000465167 CCDC144BQ3MJ40 725 aa6.79□□□□□ -1.32
SSBP1-204ENST00000465167 RRP12Q5JTH9 1297 aaKnown RBP6.79□□□□□ -1.32
SSBP1-204ENST00000465167 ANKRD45Q5TZF3 282 aa6.79□□□□□ -1.32
SSBP1-204ENST00000465167 MAMDC4Q6UXC1 1216 aa6.79□□□□□ -1.32
SSBP1-204ENST00000465167 ACAD11Q709F0 780 aa6.79□□□□□ -1.32
SSBP1-204ENST00000465167 CENPQQ7L2Z9 268 aaPredicted RBP6.79□□□□□ -1.32
SSBP1-204ENST00000465167 ARMCX2Q7L311 632 aa6.79□□□□□ -1.32
SSBP1-204ENST00000465167 C12orf40Q86WS4 652 aa6.79□□□□□ -1.32
SSBP1-204ENST00000465167 TMEM199Q8N511 208 aa6.79□□□□□ -1.32
SSBP1-204ENST00000465167 REPS2Q8NFH8 660 aa6.79□□□□□ -1.32
SSBP1-204ENST00000465167 STAG1Q8WVM7 1258 aa6.79□□□□□ -1.32
SSBP1-204ENST00000465167 MKL1Q969V6 931 aa6.79□□□□□ -1.32
SSBP1-204ENST00000465167 LENG1Q96BZ8 264 aaPredicted RBP6.79□□□□□ -1.32
SSBP1-204ENST00000465167 EVI5LQ96CN4 794 aa6.79□□□□□ -1.32
SSBP1-204ENST00000465167 NAP1L5Q96NT1 182 aaPredicted RBP6.79□□□□□ -1.32
SSBP1-204ENST00000465167 RUSC1Q9BVN2 902 aa6.79□□□□□ -1.32
SSBP1-204ENST00000465167 LNPKQ9C0E8 428 aa6.79□□□□□ -1.32
SSBP1-204ENST00000465167 MRPL18Q9H0U6 180 aaKnown RBP6.79□□□□□ -1.32
SSBP1-204ENST00000465167 EPB41L4AQ9HCS5 686 aaPredicted RBP6.79□□□□□ -1.32
SSBP1-204ENST00000465167 RNF146Q9NTX7 359 aa6.79□□□□□ -1.32
SSBP1-204ENST00000465167 CCPG1Q9ULG6 757 aa6.79□□□□□ -1.32
SSBP1-204ENST00000465167 ELP1O95163 1332 aa6.78□□□□□ -1.32
SSBP1-204ENST00000465167 RAD50Q92878 1312 aa6.78□□□□□ -1.32
SSBP1-204ENST00000465167 DNAJC25-GNG10A0A024R161 153 aa6.78□□□□□ -1.32
SSBP1-204ENST00000465167 IGKV6D-41A0A0C4DH26 115 aa6.78□□□□□ -1.32
SSBP1-204ENST00000465167 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.78□□□□□ -1.32
SSBP1-204ENST00000465167 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.78□□□□□ -1.32
SSBP1-204ENST00000465167 TRIM43BA6NCK2 446 aa6.78□□□□□ -1.32
SSBP1-204ENST00000465167 KIAA0355O15063 1070 aa6.78□□□□□ -1.32
SSBP1-204ENST00000465167 CABYRO75952 493 aa6.78□□□□□ -1.32
SSBP1-204ENST00000465167 ASGR1P07306 291 aa6.78□□□□□ -1.32
SSBP1-204ENST00000465167 PTMSP20962 102 aa6.78□□□□□ -1.32
SSBP1-204ENST00000465167 MCCP23508 829 aa6.78□□□□□ -1.32
SSBP1-204ENST00000465167 TNFAIP2Q03169 654 aa6.78□□□□□ -1.32
SSBP1-204ENST00000465167 BRDTQ58F21 947 aaPredicted RBP6.78□□□□□ -1.32
SSBP1-204ENST00000465167 ZMYM1Q5SVZ6 1142 aa6.78□□□□□ -1.32
SSBP1-204ENST00000465167 ANKRD33Q7Z3H0 272 aa6.78□□□□□ -1.32
SSBP1-204ENST00000465167 MTERF4Q7Z6M4 381 aaKnown RBP6.78□□□□□ -1.32
SSBP1-204ENST00000465167 TLK2Q86UE8 772 aa6.78□□□□□ -1.32
SSBP1-204ENST00000465167 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.78□□□□□ -1.32
SSBP1-204ENST00000465167 CCDC144CPQ8IYA2 1237 aa6.78□□□□□ -1.32
SSBP1-204ENST00000465167 BEND7Q8N7W2 519 aaPredicted RBP6.78□□□□□ -1.32
SSBP1-204ENST00000465167 ZSCAN1Q8NBB4 408 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms