RNA–Protein interactions for RNA: ENST00000465057.5

CMTM1-207, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 797 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-207ENST00000465057 MKNK2Q9HBH9 465 aa6.45□□□□□ -1.38
CMTM1-207ENST00000465057 PRDM5Q9NQX1 630 aaPredicted RBP6.45□□□□□ -1.38
CMTM1-207ENST00000465057 ZNF214Q9UL59 606 aaPredicted RBP6.45□□□□□ -1.38
CMTM1-207ENST00000465057 ADAMTS5Q9UNA0 930 aa6.45□□□□□ -1.38
CMTM1-207ENST00000465057 MUC3AQ02505 3323 aa6.45□□□□□ -1.38
CMTM1-207ENST00000465057 LAMA4Q16363 1823 aa6.45□□□□□ -1.38
CMTM1-207ENST00000465057 CCDC171Q6TFL3 1326 aa6.45□□□□□ -1.38
CMTM1-207ENST00000465057 REV3LO60673 3130 aa6.44□□□□□ -1.38
CMTM1-207ENST00000465057 SLC25A27O95847 323 aa6.44□□□□□ -1.38
CMTM1-207ENST00000465057 NDUFB10O96000 172 aa6.44□□□□□ -1.38
CMTM1-207ENST00000465057 PGK1P00558 417 aa6.44□□□□□ -1.38
CMTM1-207ENST00000465057 ADH5P11766 374 aa6.44□□□□□ -1.38
CMTM1-207ENST00000465057 U2AF2P26368 475 aaKnown RBP eCLIP6.44□□□□□ -1.38
CMTM1-207ENST00000465057 SSTR4P31391 388 aa6.44□□□□□ -1.38
CMTM1-207ENST00000465057 STAT3P40763 770 aa6.44□□□□□ -1.38
CMTM1-207ENST00000465057 CD97P48960 835 aa6.44□□□□□ -1.38
CMTM1-207ENST00000465057 USP11P51784 963 aa6.44□□□□□ -1.38
CMTM1-207ENST00000465057 KCTD2Q14681 263 aa6.44□□□□□ -1.38
CMTM1-207ENST00000465057 BMS1Q14692 1282 aaKnown RBP6.44□□□□□ -1.38
CMTM1-207ENST00000465057 LRRC41Q15345 812 aa6.44□□□□□ -1.38
CMTM1-207ENST00000465057 ZNF792Q3KQV3 632 aa6.44□□□□□ -1.38
CMTM1-207ENST00000465057 SBK1Q52WX2 424 aa6.44□□□□□ -1.38
CMTM1-207ENST00000465057 SNRNP48Q6IEG0 339 aaKnown RBP6.44□□□□□ -1.38
CMTM1-207ENST00000465057 RCSD1Q6JBY9 416 aa6.44□□□□□ -1.38
CMTM1-207ENST00000465057 SLC39A5Q6ZMH5 540 aa6.44□□□□□ -1.38
CMTM1-207ENST00000465057 DTHD1Q6ZMT9 781 aa6.44□□□□□ -1.38
CMTM1-207ENST00000465057 RASGRP2Q7LDG7 609 aa6.44□□□□□ -1.38
CMTM1-207ENST00000465057 CPXCR1Q8N123 301 aa6.44□□□□□ -1.38
CMTM1-207ENST00000465057 LRRC47Q8N1G4 583 aaKnown RBP6.44□□□□□ -1.38
CMTM1-207ENST00000465057 MSL3Q8N5Y2 521 aaKnown RBP6.44□□□□□ -1.38
CMTM1-207ENST00000465057 ARRDC4Q8NCT1 418 aa6.44□□□□□ -1.38
CMTM1-207ENST00000465057 SLC17A8Q8NDX2 589 aa6.44□□□□□ -1.38
CMTM1-207ENST00000465057 SHKBP1Q8TBC3 707 aa6.44□□□□□ -1.38
CMTM1-207ENST00000465057 EZH1Q92800 747 aaPredicted RBP6.44□□□□□ -1.38
CMTM1-207ENST00000465057 INTS4Q96HW7 963 aaKnown RBP6.44□□□□□ -1.38
CMTM1-207ENST00000465057 FAM161BQ96MY7 647 aa6.44□□□□□ -1.38
CMTM1-207ENST00000465057 LBHD1Q9BQE6 289 aaPredicted RBP6.44□□□□□ -1.38
CMTM1-207ENST00000465057 DCTPP1Q9H773 170 aa6.44□□□□□ -1.38
CMTM1-207ENST00000465057 XPNPEP3Q9NQH7 507 aa6.44□□□□□ -1.38
CMTM1-207ENST00000465057 PDLIM7Q9NR12 457 aa6.44□□□□□ -1.38
CMTM1-207ENST00000465057 RAD18Q9NS91 495 aa6.44□□□□□ -1.38
CMTM1-207ENST00000465057 CLIP2Q9UDT6 1046 aa6.44□□□□□ -1.38
CMTM1-207ENST00000465057 PRKAG2Q9UGJ0 569 aa6.44□□□□□ -1.38
CMTM1-207ENST00000465057 RIPK3Q9Y572 518 aa6.44□□□□□ -1.38
CMTM1-207ENST00000465057 MORC2Q9Y6X9 1032 aaPredicted RBP6.44□□□□□ -1.38
CMTM1-207ENST00000465057 LOC102724159A0A0B4J2E5 919 aa6.43□□□□□ -1.38
CMTM1-207ENST00000465057 IGKV6D-41A0A0C4DH26 115 aa6.43□□□□□ -1.38
CMTM1-207ENST00000465057 KRTAP9-6A0A140TA67 174 aa6.43□□□□□ -1.38
CMTM1-207ENST00000465057 FAM95CA0A1B0GW59 222 aa6.43□□□□□ -1.38
CMTM1-207ENST00000465057 ANKRD33BA6NCL7 494 aa6.43□□□□□ -1.38
CMTM1-207ENST00000465057 F5H6K3 240 aa6.43□□□□□ -1.38
CMTM1-207ENST00000465057 RNF113AO15541 343 aaKnown RBP6.43□□□□□ -1.38
CMTM1-207ENST00000465057 CTIFO43310 598 aaKnown RBP6.43□□□□□ -1.38
CMTM1-207ENST00000465057 MED26O95402 600 aa6.43□□□□□ -1.38
CMTM1-207ENST00000465057 TUBB4AP04350 444 aa6.43□□□□□ -1.38
CMTM1-207ENST00000465057 APPP05067 770 aa6.43□□□□□ -1.38
CMTM1-207ENST00000465057 SLC3A2P08195 630 aaKnown RBP6.43□□□□□ -1.38
CMTM1-207ENST00000465057 TPM1P09493 284 aa6.43□□□□□ -1.38
CMTM1-207ENST00000465057 ZNF865P0CJ78 1059 aaPredicted RBP6.43□□□□□ -1.38
CMTM1-207ENST00000465057 CCDC192P0DO97 292 aa6.43□□□□□ -1.38
CMTM1-207ENST00000465057 ITGB8P26012 769 aa6.43□□□□□ -1.38
CMTM1-207ENST00000465057 KLRC3Q07444 240 aa6.43□□□□□ -1.38
CMTM1-207ENST00000465057 PWP2Q15269 919 aaKnown RBP6.43□□□□□ -1.38
CMTM1-207ENST00000465057 TPD52L1Q16890 204 aaPredicted RBP6.43□□□□□ -1.38
CMTM1-207ENST00000465057 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.43□□□□□ -1.38
CMTM1-207ENST00000465057 C9orf50Q5SZB4 431 aa6.43□□□□□ -1.38
CMTM1-207ENST00000465057 CCDC129Q6ZRS4 1044 aa6.43□□□□□ -1.38
CMTM1-207ENST00000465057 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.43□□□□□ -1.38
CMTM1-207ENST00000465057 TEX2Q8IWB9 1127 aa6.43□□□□□ -1.38
CMTM1-207ENST00000465057 IFNL3Q8IZI9 196 aa6.43□□□□□ -1.38
CMTM1-207ENST00000465057 PI4K2BQ8TCG2 481 aa6.43□□□□□ -1.38
CMTM1-207ENST00000465057 GPT2Q8TD30 523 aa6.43□□□□□ -1.38
CMTM1-207ENST00000465057 FBLIM1Q8WUP2 373 aa6.43□□□□□ -1.38
CMTM1-207ENST00000465057 BADQ92934 168 aa6.43□□□□□ -1.38
CMTM1-207ENST00000465057 CEP95Q96GE4 821 aa6.43□□□□□ -1.38
CMTM1-207ENST00000465057 GUCD1Q96NT3 240 aa6.43□□□□□ -1.38
CMTM1-207ENST00000465057 SLF1Q9BQI6 1058 aa6.43□□□□□ -1.38
CMTM1-207ENST00000465057 TINF2Q9BSI4 451 aa6.43□□□□□ -1.38
CMTM1-207ENST00000465057 YIPF2Q9BWQ6 316 aa6.43□□□□□ -1.38
CMTM1-207ENST00000465057 NACAP1Q9BZK3 213 aa6.43□□□□□ -1.38
CMTM1-207ENST00000465057 YY1AP1Q9H869 796 aa6.43□□□□□ -1.38
CMTM1-207ENST00000465057 RAVER2Q9HCJ3 691 aaKnown RBP6.43□□□□□ -1.38
CMTM1-207ENST00000465057 PCMTD2Q9NV79 361 aa6.43□□□□□ -1.38
CMTM1-207ENST00000465057 MTMR10Q9NXD2 777 aa6.43□□□□□ -1.38
CMTM1-207ENST00000465057 NYAP2Q9P242 653 aa6.43□□□□□ -1.38
CMTM1-207ENST00000465057 DDX41Q9UJV9 622 aaKnown RBP6.43□□□□□ -1.38
CMTM1-207ENST00000465057 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.43□□□□□ -1.38
CMTM1-207ENST00000465057 XIRP2A4UGR9 3374 aa6.43□□□□□ -1.38
CMTM1-207ENST00000465057 SYNGAP1Q96PV0 1343 aa6.43□□□□□ -1.38
CMTM1-207ENST00000465057 SYNRGQ9UMZ2 1314 aa6.43□□□□□ -1.38
CMTM1-207ENST00000465057 PLIN4Q96Q06 1357 aa6.43□□□□□ -1.38
CMTM1-207ENST00000465057 A0A1W2PQ45 241 aaPredicted RBP6.42□□□□□ -1.38
CMTM1-207ENST00000465057 A0A1W2PQY0 241 aa6.42□□□□□ -1.38
CMTM1-207ENST00000465057 TRIM43BA6NCK2 446 aa6.42□□□□□ -1.38
CMTM1-207ENST00000465057 MYADML2A6NDP7 307 aa6.42□□□□□ -1.38
CMTM1-207ENST00000465057 CCP110O43303 1012 aa6.42□□□□□ -1.38
CMTM1-207ENST00000465057 ADCY6O43306 1168 aa6.42□□□□□ -1.38
CMTM1-207ENST00000465057 ADAMTS4O75173 837 aa6.42□□□□□ -1.38
CMTM1-207ENST00000465057 CAVIN2O95810 425 aa6.42□□□□□ -1.38
CMTM1-207ENST00000465057 SNAI1O95863 264 aaPredicted RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms