RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 KIF5AQ12840 1032 aa23.74■■□□□ 1.39
PDLIM2-216ENST00000464275 RAPGEF1Q13905 1077 aa23.74■■□□□ 1.39
PDLIM2-216ENST00000464275 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.74■■□□□ 1.395e-6■■■□□ 17.2
PDLIM2-216ENST00000464275 CCDC60Q8IWA6 550 aaPredicted RBP23.74■■□□□ 1.39
PDLIM2-216ENST00000464275 TAF1DQ9H5J8 278 aaPredicted RBP23.74■■□□□ 1.39
PDLIM2-216ENST00000464275 IGSF9BQ9UPX0 1349 aa23.74■■□□□ 1.39
PDLIM2-216ENST00000464275 SOWAHBA6NEL2 793 aa23.74■■□□□ 1.39
PDLIM2-216ENST00000464275 SLC16A4O15374 487 aa23.74■■□□□ 1.39
PDLIM2-216ENST00000464275 TLR2O60603 784 aa23.74■■□□□ 1.39
PDLIM2-216ENST00000464275 ATG7O95352 703 aa23.74■■□□□ 1.39
PDLIM2-216ENST00000464275 ACTN1P12814 892 aa23.74■■□□□ 1.39
PDLIM2-216ENST00000464275 SP2Q02086 613 aa23.74■■□□□ 1.39
PDLIM2-216ENST00000464275 SP4Q02446 784 aa23.74■■□□□ 1.39
PDLIM2-216ENST00000464275 TDRD12Q587J7 1177 aaKnown RBP23.74■■□□□ 1.39
PDLIM2-216ENST00000464275 TXLNBQ8N3L3 684 aa23.74■■□□□ 1.39
PDLIM2-216ENST00000464275 IFIH1Q9BYX4 1025 aaKnown RBP23.74■■□□□ 1.39
PDLIM2-216ENST00000464275 EXOC7Q9UPT5 735 aa23.74■■□□□ 1.39
PDLIM2-216ENST00000464275 IQCA1LA6NCM1 817 aa23.73■■□□□ 1.39
PDLIM2-216ENST00000464275 RCCD1A6NED2 376 aa23.73■■□□□ 1.39
PDLIM2-216ENST00000464275 TUBBP07437 444 aa23.73■■□□□ 1.39
PDLIM2-216ENST00000464275 UCHL3P15374 230 aa23.73■■□□□ 1.39
PDLIM2-216ENST00000464275 PRKCEQ02156 737 aa23.73■■□□□ 1.39
PDLIM2-216ENST00000464275 FSTL1Q12841 308 aa23.73■■□□□ 1.39
PDLIM2-216ENST00000464275 MOGSQ13724 837 aa23.73■■□□□ 1.39
PDLIM2-216ENST00000464275 BRD3Q15059 726 aa23.73■■□□□ 1.39
PDLIM2-216ENST00000464275 ASIC2Q16515 512 aa23.73■■□□□ 1.39
PDLIM2-216ENST00000464275 EAPPQ56P03 285 aaPredicted RBP23.73■■□□□ 1.39
PDLIM2-216ENST00000464275 SEPT14Q6ZU15 432 aa23.73■■□□□ 1.39
PDLIM2-216ENST00000464275 FAM133AQ8N9E0 248 aa23.73■■□□□ 1.39
PDLIM2-216ENST00000464275 MCPH1Q8NEM0 835 aa23.73■■□□□ 1.39
PDLIM2-216ENST00000464275 LACRTQ9GZZ8 138 aa23.73■■□□□ 1.39
PDLIM2-216ENST00000464275 GCNT4Q9P109 453 aa23.73■■□□□ 1.39
PDLIM2-216ENST00000464275 TELO2Q9Y4R8 837 aa23.73■■□□□ 1.39
PDLIM2-216ENST00000464275 CCDC151A5D8V7 595 aa23.72■■□□□ 1.39
PDLIM2-216ENST00000464275 DGAT1O75907 488 aa23.72■■□□□ 1.39
PDLIM2-216ENST00000464275 FMO5P49326 533 aa23.72■■□□□ 1.39
PDLIM2-216ENST00000464275 DMP1Q13316 513 aaPredicted RBP23.72■■□□□ 1.39
PDLIM2-216ENST00000464275 XKR3Q5GH77 459 aa23.72■■□□□ 1.39
PDLIM2-216ENST00000464275 CYFIP1Q7L576 1253 aa23.72■■□□□ 1.39
PDLIM2-216ENST00000464275 SPIRE2Q8WWL2 714 aa23.72■■□□□ 1.39
PDLIM2-216ENST00000464275 SIX2Q9NPC8 291 aa23.72■■□□□ 1.39
PDLIM2-216ENST00000464275 SEPT9Q9UHD8 586 aaPredicted RBP23.72■■□□□ 1.39
PDLIM2-216ENST00000464275 TFR2Q9UP52 801 aa23.72■■□□□ 1.39
PDLIM2-216ENST00000464275 RBAK-RBAKDNI3L0D1 243 aa23.72■■□□□ 1.39
PDLIM2-216ENST00000464275 CHMP4BP1P59074 171 aa23.72■■□□□ 1.39
PDLIM2-216ENST00000464275 BFSP1Q12934 665 aa23.72■■□□□ 1.39
PDLIM2-216ENST00000464275 TEX35Q5T0J7 233 aa23.72■■□□□ 1.39
PDLIM2-216ENST00000464275 ARFGAP3Q9NP61 516 aa23.72■■□□□ 1.39
PDLIM2-216ENST00000464275 PDLIM7Q9NR12 457 aa23.72■■□□□ 1.39
PDLIM2-216ENST00000464275 MCM3APO60318 1980 aa23.72■■□□□ 1.39
PDLIM2-216ENST00000464275 MAPK13O15264 365 aa23.71■■□□□ 1.39
PDLIM2-216ENST00000464275 KRT13P13646 458 aa23.71■■□□□ 1.39
PDLIM2-216ENST00000464275 WHAMMP3Q1A5X7 153 aa23.71■■□□□ 1.39
PDLIM2-216ENST00000464275 LDLRAD1Q5T700 205 aa23.71■■□□□ 1.39
PDLIM2-216ENST00000464275 CC2D1AQ6P1N0 951 aaPredicted RBP23.71■■□□□ 1.39
PDLIM2-216ENST00000464275 SPAG5Q96R06 1193 aa23.71■■□□□ 1.39
PDLIM2-216ENST00000464275 MPHOSPH6Q99547 160 aaKnown RBP23.71■■□□□ 1.39
PDLIM2-216ENST00000464275 NTPCRQ9BSD7 190 aaKnown RBP23.71■■□□□ 1.39
PDLIM2-216ENST00000464275 CYP26B1Q9NR63 512 aa23.71■■□□□ 1.39
PDLIM2-216ENST00000464275 SYNGAP1Q96PV0 1343 aa23.71■■□□□ 1.39
PDLIM2-216ENST00000464275 CCDC169A6NNP5 214 aa23.71■■□□□ 1.39
PDLIM2-216ENST00000464275 PJA2O43164 708 aa23.71■■□□□ 1.39
PDLIM2-216ENST00000464275 SORBS3O60504 671 aa23.71■■□□□ 1.39
PDLIM2-216ENST00000464275 SIP14410 1827 aa23.71■■□□□ 1.39
PDLIM2-216ENST00000464275 MAGEA1P43355 309 aa23.71■■□□□ 1.39
PDLIM2-216ENST00000464275 NPTX2P47972 431 aa23.71■■□□□ 1.39
PDLIM2-216ENST00000464275 RTP1P59025 263 aa23.71■■□□□ 1.39
PDLIM2-216ENST00000464275 INTS8Q75QN2 995 aaKnown RBP23.71■■□□□ 1.39
PDLIM2-216ENST00000464275 PNMA8AQ86V59 439 aaPredicted RBP23.71■■□□□ 1.39
PDLIM2-216ENST00000464275 TMEM161BQ8NDZ6 487 aa23.71■■□□□ 1.39
PDLIM2-216ENST00000464275 ATP6V0A4Q9HBG4 840 aa23.71■■□□□ 1.39
PDLIM2-216ENST00000464275 KMT5AQ9NQR1 393 aa23.71■■□□□ 1.39
PDLIM2-216ENST00000464275 ZNF302Q9NR11 478 aa23.71■■□□□ 1.39
PDLIM2-216ENST00000464275 RBPJLQ9UBG7 517 aa23.71■■□□□ 1.39
PDLIM2-216ENST00000464275 MAFBQ9Y5Q3 323 aaPredicted RBP23.71■■□□□ 1.39
PDLIM2-216ENST00000464275 KLHL30Q0D2K2 578 aa23.7■■□□□ 1.38
PDLIM2-216ENST00000464275 GPAT2Q6NUI2 795 aa23.7■■□□□ 1.38
PDLIM2-216ENST00000464275 ZNF771Q7L3S4 317 aaPredicted RBP23.7■■□□□ 1.38
PDLIM2-216ENST00000464275 XXYLT1Q8NBI6 393 aa23.7■■□□□ 1.38
PDLIM2-216ENST00000464275 PCIF1Q9H4Z3 704 aa23.7■■□□□ 1.38
PDLIM2-216ENST00000464275 TBX20Q9UMR3 447 aa23.7■■□□□ 1.38
PDLIM2-216ENST00000464275 BZW2Q9Y6E2 419 aaKnown RBP23.7■■□□□ 1.38
PDLIM2-216ENST00000464275 GPR162Q16538 588 aa23.69■■□□□ 1.38
PDLIM2-216ENST00000464275 GPIHBP1Q8IV16 184 aa23.69■■□□□ 1.38
PDLIM2-216ENST00000464275 HNRNPLLQ8WVV9 542 aaKnown RBP23.69■■□□□ 1.38
PDLIM2-216ENST00000464275 SECISBP2LQ93073 1101 aaKnown RBP23.69■■□□□ 1.38
PDLIM2-216ENST00000464275 LUC7LQ9NQ29 371 aaKnown RBP23.69■■□□□ 1.38
PDLIM2-216ENST00000464275 HSPBP1Q9NZL4 362 aa23.69■■□□□ 1.38
PDLIM2-216ENST00000464275 DAAM1Q9Y4D1 1078 aa23.69■■□□□ 1.38
PDLIM2-216ENST00000464275 PLXNA1Q9UIW2 1896 aa23.69■■□□□ 1.38
PDLIM2-216ENST00000464275 TGFB3P10600 412 aa23.69■■□□□ 1.38
PDLIM2-216ENST00000464275 UBA1P22314 1058 aaKnown RBP23.69■■□□□ 1.38
PDLIM2-216ENST00000464275 GFPT1Q06210 699 aaPredicted RBP23.69■■□□□ 1.38
PDLIM2-216ENST00000464275 NEDD9Q14511 834 aa23.69■■□□□ 1.38
PDLIM2-216ENST00000464275 MAP4K3Q8IVH8 894 aa23.69■■□□□ 1.38
PDLIM2-216ENST00000464275 CBWD1Q9BRT8 395 aa23.69■■□□□ 1.38
PDLIM2-216ENST00000464275 TXNRD2Q9NNW7 524 aa23.69■■□□□ 1.38
PDLIM2-216ENST00000464275 IGKV6D-21A0A0A0MT36 114 aa23.68■■□□□ 1.38
PDLIM2-216ENST00000464275 TISP43B9A030 160 aa23.68■■□□□ 1.38
PDLIM2-216ENST00000464275 JAM2P57087 298 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms