RNA–Protein interactions for RNA: ENST00000464263.1

RAB11FIP3-208, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 329 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-208ENST00000464263 CALML4Q96GE6 196 aa17.11■□□□□ 0.33
RAB11FIP3-208ENST00000464263 SCLT1Q96NL6 688 aa17.11■□□□□ 0.33
RAB11FIP3-208ENST00000464263 POLR3FQ9H1D9 316 aaPredicted RBP17.11■□□□□ 0.33
RAB11FIP3-208ENST00000464263 TSPYL2Q9H2G4 693 aaPredicted RBP17.11■□□□□ 0.33
RAB11FIP3-208ENST00000464263 GPRC5CQ9NQ84 441 aa17.11■□□□□ 0.33
RAB11FIP3-208ENST00000464263 CFAP45Q9UL16 551 aa17.11■□□□□ 0.33
RAB11FIP3-208ENST00000464263 PCDHA11Q9Y5I1 949 aa17.11■□□□□ 0.33
RAB11FIP3-208ENST00000464263 MYH11P35749 1972 aa17.1■□□□□ 0.33
RAB11FIP3-208ENST00000464263 GJB5O95377 273 aa17.1■□□□□ 0.33
RAB11FIP3-208ENST00000464263 MYOGP15173 224 aa17.1■□□□□ 0.33
RAB11FIP3-208ENST00000464263 FGFR4P22455 802 aa17.1■□□□□ 0.33
RAB11FIP3-208ENST00000464263 DNAJB2P25686 324 aa17.1■□□□□ 0.33
RAB11FIP3-208ENST00000464263 CAPSQ13938 189 aa17.1■□□□□ 0.33
RAB11FIP3-208ENST00000464263 IFNLR1Q8IU57 520 aaPredicted RBP17.1■□□□□ 0.33
RAB11FIP3-208ENST00000464263 MYOCDQ8IZQ8 938 aa17.1■□□□□ 0.33
RAB11FIP3-208ENST00000464263 CRIPAKQ8N1N5 446 aa17.1■□□□□ 0.33
RAB11FIP3-208ENST00000464263 RNF149Q8NC42 400 aa17.1■□□□□ 0.33
RAB11FIP3-208ENST00000464263 SYMPKQ92797 1274 aaKnown RBP17.1■□□□□ 0.33
RAB11FIP3-208ENST00000464263 CDK5RAP3Q96JB5 506 aa17.1■□□□□ 0.33
RAB11FIP3-208ENST00000464263 INO80BQ9C086 356 aaPredicted RBP17.1■□□□□ 0.33
RAB11FIP3-208ENST00000464263 MINDY3Q9H8M7 445 aa17.1■□□□□ 0.33
RAB11FIP3-208ENST00000464263 RGS18Q9NS28 235 aa17.1■□□□□ 0.33
RAB11FIP3-208ENST00000464263 BLOC1S4Q9NUP1 217 aa17.1■□□□□ 0.33
RAB11FIP3-208ENST00000464263 RCOR1Q9UKL0 485 aa17.1■□□□□ 0.33
RAB11FIP3-208ENST00000464263 YBX2Q9Y2T7 364 aaKnown RBP17.1■□□□□ 0.33
RAB11FIP3-208ENST00000464263 SZT2Q5T011 3432 aa17.09■□□□□ 0.33
RAB11FIP3-208ENST00000464263 PLA2G4BP0C869 781 aa17.09■□□□□ 0.33
RAB11FIP3-208ENST00000464263 PLCG1P19174 1290 aa17.09■□□□□ 0.33
RAB11FIP3-208ENST00000464263 SLC12A3P55017 1021 aa17.09■□□□□ 0.33
RAB11FIP3-208ENST00000464263 PTENP60484 403 aa17.09■□□□□ 0.33
RAB11FIP3-208ENST00000464263 RAB30Q15771 203 aa17.09■□□□□ 0.33
RAB11FIP3-208ENST00000464263 FAM102BQ5T8I3 360 aa17.09■□□□□ 0.33
RAB11FIP3-208ENST00000464263 SRGAP1Q7Z6B7 1085 aa17.09■□□□□ 0.33
RAB11FIP3-208ENST00000464263 ADAM2Q99965 735 aa17.09■□□□□ 0.33
RAB11FIP3-208ENST00000464263 RUSC1Q9BVN2 902 aa17.09■□□□□ 0.33
RAB11FIP3-208ENST00000464263 POLD4Q9HCU8 107 aa17.09■□□□□ 0.33
RAB11FIP3-208ENST00000464263 MSRAQ9UJ68 235 aa17.09■□□□□ 0.33
RAB11FIP3-208ENST00000464263 TLL1O43897 1013 aa17.08■□□□□ 0.32
RAB11FIP3-208ENST00000464263 FAM189BP81408 668 aa17.08■□□□□ 0.32
RAB11FIP3-208ENST00000464263 HTRA4P83105 476 aaPredicted RBP17.08■□□□□ 0.32
RAB11FIP3-208ENST00000464263 TFDP1Q14186 410 aa17.08■□□□□ 0.32
RAB11FIP3-208ENST00000464263 AXDND1Q5T1B0 1012 aaPredicted RBP17.08■□□□□ 0.32
RAB11FIP3-208ENST00000464263 FAM117BQ6P1L5 589 aa17.08■□□□□ 0.32
RAB11FIP3-208ENST00000464263 BSNDQ8WZ55 320 aa17.08■□□□□ 0.32
RAB11FIP3-208ENST00000464263 CHAMP1Q96JM3 812 aa17.08■□□□□ 0.32
RAB11FIP3-208ENST00000464263 RAD9AQ99638 391 aa17.08■□□□□ 0.32
RAB11FIP3-208ENST00000464263 NFKBIZQ9BYH8 718 aa17.08■□□□□ 0.32
RAB11FIP3-208ENST00000464263 C9IYK1 514 aa17.07■□□□□ 0.32
RAB11FIP3-208ENST00000464263 CUTAO60888 179 aa17.07■□□□□ 0.32
RAB11FIP3-208ENST00000464263 UPP2O95045 317 aa17.07■□□□□ 0.32
RAB11FIP3-208ENST00000464263 SFPQP23246 707 aaKnown RBP eCLIP17.07■□□□□ 0.32
RAB11FIP3-208ENST00000464263 GUCY2CP25092 1073 aa17.07■□□□□ 0.32
RAB11FIP3-208ENST00000464263 PHKA2P46019 1235 aa17.07■□□□□ 0.32
RAB11FIP3-208ENST00000464263 NUCB2P80303 420 aa17.07■□□□□ 0.32
RAB11FIP3-208ENST00000464263 ARSHQ5FYA8 562 aa17.07■□□□□ 0.32
RAB11FIP3-208ENST00000464263 SLC24A5Q71RS6 500 aa17.07■□□□□ 0.32
RAB11FIP3-208ENST00000464263 DAW1Q8N136 415 aa17.07■□□□□ 0.32
RAB11FIP3-208ENST00000464263 KCNG4Q8TDN1 519 aa17.07■□□□□ 0.32
RAB11FIP3-208ENST00000464263 KIFAP3Q92845 792 aa17.07■□□□□ 0.32
RAB11FIP3-208ENST00000464263 TIFAQ96CG3 184 aa17.07■□□□□ 0.32
RAB11FIP3-208ENST00000464263 ZBED2Q9BTP6 218 aa17.07■□□□□ 0.32
RAB11FIP3-208ENST00000464263 NKX2-4Q9H2Z4 354 aa17.07■□□□□ 0.32
RAB11FIP3-208ENST00000464263 TTYH1Q9H313 450 aaPredicted RBP17.07■□□□□ 0.32
RAB11FIP3-208ENST00000464263 CHST12Q9NRB3 414 aa17.07■□□□□ 0.32
RAB11FIP3-208ENST00000464263 C1orf112Q9NSG2 853 aa17.07■□□□□ 0.32
RAB11FIP3-208ENST00000464263 CCDC39Q9UFE4 941 aa17.07■□□□□ 0.32
RAB11FIP3-208ENST00000464263 PCDHA7Q9UN72 937 aa17.07■□□□□ 0.32
RAB11FIP3-208ENST00000464263 TMEM265A0A087WTH1 108 aa17.06■□□□□ 0.32
RAB11FIP3-208ENST00000464263 A0A087X0B3 334 aa17.06■□□□□ 0.32
RAB11FIP3-208ENST00000464263 DENND3A2RUS2 1198 aa17.06■□□□□ 0.32
RAB11FIP3-208ENST00000464263 SSBP05455 408 aaKnown RBP eCLIP17.06■□□□□ 0.32
RAB11FIP3-208ENST00000464263 ZSCAN20P17040 1043 aaPredicted RBP17.06■□□□□ 0.32
RAB11FIP3-208ENST00000464263 SARSP49591 514 aaKnown RBP17.06■□□□□ 0.32
RAB11FIP3-208ENST00000464263 MAPK7Q13164 816 aa17.06■□□□□ 0.32
RAB11FIP3-208ENST00000464263 MCM6Q14566 821 aa17.06■□□□□ 0.32
RAB11FIP3-208ENST00000464263 CATSPER4Q7RTX7 472 aa17.06■□□□□ 0.32
RAB11FIP3-208ENST00000464263 RAD54LQ92698 747 aa17.06■□□□□ 0.32
RAB11FIP3-208ENST00000464263 TIPINQ9BVW5 301 aa17.06■□□□□ 0.32
RAB11FIP3-208ENST00000464263 SEMA6BQ9H3T3 888 aa17.06■□□□□ 0.32
RAB11FIP3-208ENST00000464263 KCND2Q9NZV8 630 aa17.06■□□□□ 0.32
RAB11FIP3-208ENST00000464263 INSL6Q9Y581 213 aa17.06■□□□□ 0.32
RAB11FIP3-208ENST00000464263 ATP6V1DQ9Y5K8 247 aa17.06■□□□□ 0.32
RAB11FIP3-208ENST00000464263 LCHNA4D1U4 455 aa17.05■□□□□ 0.32
RAB11FIP3-208ENST00000464263 HIP1RO75146 1068 aa17.05■□□□□ 0.32
RAB11FIP3-208ENST00000464263 ARHGEF15O94989 841 aa17.05■□□□□ 0.32
RAB11FIP3-208ENST00000464263 CA3P07451 260 aa17.05■□□□□ 0.32
RAB11FIP3-208ENST00000464263 HOXA11P31270 313 aaPredicted RBP17.05■□□□□ 0.32
RAB11FIP3-208ENST00000464263 TXLNAP40222 546 aa17.05■□□□□ 0.32
RAB11FIP3-208ENST00000464263 NAMPTP43490 491 aa17.05■□□□□ 0.32
RAB11FIP3-208ENST00000464263 KRT85P78386 507 aa17.05■□□□□ 0.32
RAB11FIP3-208ENST00000464263 MBTD1Q05BQ5 628 aa17.05■□□□□ 0.32
RAB11FIP3-208ENST00000464263 PCBP1Q15365 356 aaKnown RBP eCLIP17.05■□□□□ 0.32
RAB11FIP3-208ENST00000464263 NAALADL2Q58DX5 795 aa17.05■□□□□ 0.32
RAB11FIP3-208ENST00000464263 RRAGBQ5VZM2 374 aa17.05■□□□□ 0.32
RAB11FIP3-208ENST00000464263 CDCA2Q69YH5 1023 aaPredicted RBP17.05■□□□□ 0.32
RAB11FIP3-208ENST00000464263 SHC4Q6S5L8 630 aa17.05■□□□□ 0.32
RAB11FIP3-208ENST00000464263 Q7L0L9 218 aa17.05■□□□□ 0.32
RAB11FIP3-208ENST00000464263 NPAS4Q8IUM7 802 aa17.05■□□□□ 0.32
RAB11FIP3-208ENST00000464263 RASSF8Q8NHQ8 419 aa17.05■□□□□ 0.32
RAB11FIP3-208ENST00000464263 SP7Q8TDD2 431 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms