RNA–Protein interactions for RNA: ENST00000464088.5

CD58-204, Transcript of CD58 molecule, humanhuman

TSL 1 (best)

Gene CD58, Length 874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD58-204ENST00000464088 PPME1Q9Y570 386 aa23.22■■□□□ 1.31
CD58-204ENST00000464088 ZNF318Q5VUA4 2279 aa23.22■■□□□ 1.31
CD58-204ENST00000464088 LOXHD1Q8IVV2 1947 aa23.21■■□□□ 1.31
CD58-204ENST00000464088 C19orf67A6NJJ6 358 aa23.21■■□□□ 1.31
CD58-204ENST00000464088 THPOP40225 353 aa23.21■■□□□ 1.31
CD58-204ENST00000464088 RARRES1P49788 294 aa23.21■■□□□ 1.31
CD58-204ENST00000464088 TIGD5Q53EQ6 642 aa23.21■■□□□ 1.31
CD58-204ENST00000464088 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.21■■□□□ 1.31
CD58-204ENST00000464088 KIAA0319LQ8IZA0 1049 aa23.21■■□□□ 1.31
CD58-204ENST00000464088 KRI1Q8N9T8 703 aaKnown RBP23.21■■□□□ 1.31
CD58-204ENST00000464088 DNAJB3Q8WWF6 145 aa23.21■■□□□ 1.31
CD58-204ENST00000464088 CEP170P1Q96L14 293 aa23.21■■□□□ 1.31
CD58-204ENST00000464088 PNMA5Q96PV4 448 aa23.21■■□□□ 1.31
CD58-204ENST00000464088 NACC1Q96RE7 527 aa23.21■■□□□ 1.31
CD58-204ENST00000464088 DBR1Q9UK59 544 aaKnown RBP23.21■■□□□ 1.31
CD58-204ENST00000464088 RCOR1Q9UKL0 485 aa23.21■■□□□ 1.31
CD58-204ENST00000464088 ATP6V1DQ9Y5K8 247 aa23.21■■□□□ 1.31
CD58-204ENST00000464088 COL4A6Q14031 1691 aa23.21■■□□□ 1.31
CD58-204ENST00000464088 NLRC5Q86WI3 1866 aa23.21■■□□□ 1.31
CD58-204ENST00000464088 SLC26A4O43511 780 aa23.2■■□□□ 1.3
CD58-204ENST00000464088 ZP2Q05996 745 aa23.2■■□□□ 1.3
CD58-204ENST00000464088 TBC1D8BQ0IIM8 1120 aa23.2■■□□□ 1.3
CD58-204ENST00000464088 XKR9Q5GH70 373 aa23.2■■□□□ 1.3
CD58-204ENST00000464088 FAM26DQ5JW98 314 aa23.2■■□□□ 1.3
CD58-204ENST00000464088 PABPC5Q96DU9 382 aaKnown RBP23.2■■□□□ 1.3
CD58-204ENST00000464088 CCSER1Q9C0I3 900 aa23.2■■□□□ 1.3
CD58-204ENST00000464088 DHX33Q9H6R0 707 aaKnown RBP23.2■■□□□ 1.3
CD58-204ENST00000464088 KIAA1024Q9UPX6 916 aa23.2■■□□□ 1.3
CD58-204ENST00000464088 FAM50BQ9Y247 325 aa23.2■■□□□ 1.3
CD58-204ENST00000464088 KDM3AQ9Y4C1 1321 aa23.19■■□□□ 1.3
CD58-204ENST00000464088 H3BNC9 293 aa23.19■■□□□ 1.3
CD58-204ENST00000464088 H3BQ06 376 aaPredicted RBP23.19■■□□□ 1.3
CD58-204ENST00000464088 MAFO75444 373 aaPredicted RBP23.19■■□□□ 1.3
CD58-204ENST00000464088 AMHP03971 560 aa23.19■■□□□ 1.3
CD58-204ENST00000464088 RPLP2P05387 115 aaKnown RBP23.19■■□□□ 1.3
CD58-204ENST00000464088 KRT85P78386 507 aa23.19■■□□□ 1.3
CD58-204ENST00000464088 MGAT3Q09327 533 aa23.19■■□□□ 1.3
CD58-204ENST00000464088 TMEM119Q4V9L6 283 aa23.19■■□□□ 1.3
CD58-204ENST00000464088 EPC2Q52LR7 807 aa23.19■■□□□ 1.3
CD58-204ENST00000464088 EFCAB12Q6NXP0 572 aa23.19■■□□□ 1.3
CD58-204ENST00000464088 USP49Q70CQ1 688 aa23.19■■□□□ 1.3
CD58-204ENST00000464088 CABP7Q86V35 215 aa23.19■■□□□ 1.3
CD58-204ENST00000464088 KCNG4Q8TDN1 519 aa23.19■■□□□ 1.3
CD58-204ENST00000464088 FAM49AQ9H0Q0 323 aaPredicted RBP23.19■■□□□ 1.3
CD58-204ENST00000464088 DDX19AQ9NUU7 478 aaKnown RBP23.19■■□□□ 1.3
CD58-204ENST00000464088 RALGAPA2Q2PPJ7 1873 aa23.19■■□□□ 1.3
CD58-204ENST00000464088 TRIOO75962 3097 aa23.19■■□□□ 1.3
CD58-204ENST00000464088 RFC5P40937 340 aa23.18■■□□□ 1.3
CD58-204ENST00000464088 CLCN3P51790 818 aa23.18■■□□□ 1.3
CD58-204ENST00000464088 SPECC1Q5M775 1068 aa23.18■■□□□ 1.3
CD58-204ENST00000464088 AXDND1Q5T1B0 1012 aaPredicted RBP23.18■■□□□ 1.3
CD58-204ENST00000464088 KCNK18Q7Z418 384 aa23.18■■□□□ 1.3
CD58-204ENST00000464088 NME8Q8N427 588 aa23.18■■□□□ 1.3
CD58-204ENST00000464088 LRRC71Q8N4P6 559 aa23.18■■□□□ 1.3
CD58-204ENST00000464088 EPSTI1Q96J88 318 aa23.18■■□□□ 1.3
CD58-204ENST00000464088 CHRNA1P02708 482 aa23.17■■□□□ 1.3
CD58-204ENST00000464088 UBA7P41226 1012 aa23.17■■□□□ 1.3
CD58-204ENST00000464088 DRP2Q13474 957 aa23.17■■□□□ 1.3
CD58-204ENST00000464088 RSPH3Q86UC2 560 aa23.17■■□□□ 1.3
CD58-204ENST00000464088 ADHFE1Q8IWW8 467 aa23.17■■□□□ 1.3
CD58-204ENST00000464088 KCTD17Q8N5Z5 321 aa23.17■■□□□ 1.3
CD58-204ENST00000464088 METTL13Q8N6R0 699 aa23.17■■□□□ 1.3
CD58-204ENST00000464088 DBF4BQ8NFT6 615 aa23.17■■□□□ 1.3
CD58-204ENST00000464088 IPO9Q96P70 1041 aaKnown RBP23.17■■□□□ 1.3
CD58-204ENST00000464088 XPNPEP1Q9NQW7 623 aa23.17■■□□□ 1.3
CD58-204ENST00000464088 C5orf42Q9H799 3197 aa23.16■■□□□ 1.3
CD58-204ENST00000464088 ATG2AQ2TAZ0 1938 aa23.16■■□□□ 1.3
CD58-204ENST00000464088 RSPH10B2B2RC85 870 aa23.16■■□□□ 1.3
CD58-204ENST00000464088 E9PMD0 336 aa23.16■■□□□ 1.3
CD58-204ENST00000464088 CUTAO60888 179 aa23.16■■□□□ 1.3
CD58-204ENST00000464088 CTSHP09668 335 aa23.16■■□□□ 1.3
CD58-204ENST00000464088 RSPH10BP0C881 870 aa23.16■■□□□ 1.3
CD58-204ENST00000464088 MRPS6P82932 125 aaKnown RBP23.16■■□□□ 1.3
CD58-204ENST00000464088 PLEKHG4Q58EX7 1191 aa23.16■■□□□ 1.3
CD58-204ENST00000464088 TCEAL5Q5H9L2 206 aa23.16■■□□□ 1.3
CD58-204ENST00000464088 MYOCDQ8IZQ8 938 aa23.16■■□□□ 1.3
CD58-204ENST00000464088 LRRC15Q8TF66 581 aa23.16■■□□□ 1.3
CD58-204ENST00000464088 LEO1Q8WVC0 666 aaPredicted RBP23.16■■□□□ 1.3
CD58-204ENST00000464088 SLC7A3Q8WY07 619 aa23.16■■□□□ 1.3
CD58-204ENST00000464088 JPH2Q9BR39 696 aaPredicted RBP23.16■■□□□ 1.3
CD58-204ENST00000464088 NT5C3AQ9H0P0 336 aa23.16■■□□□ 1.3
CD58-204ENST00000464088 PCDHA7Q9UN72 937 aa23.16■■□□□ 1.3
CD58-204ENST00000464088 DGAT1O75907 488 aa23.15■■□□□ 1.3
CD58-204ENST00000464088 EYA4O95677 639 aa23.15■■□□□ 1.3
CD58-204ENST00000464088 TMOD1P28289 359 aa23.15■■□□□ 1.3
CD58-204ENST00000464088 POLGP54098 1239 aaPredicted RBP23.15■■□□□ 1.3
CD58-204ENST00000464088 GPM6BQ13491 265 aa23.15■■□□□ 1.3
CD58-204ENST00000464088 EMC2Q15006 297 aa23.15■■□□□ 1.3
CD58-204ENST00000464088 KARSQ15046 597 aaKnown RBP23.15■■□□□ 1.3
CD58-204ENST00000464088 EXOC8Q8IYI6 725 aa23.15■■□□□ 1.3
CD58-204ENST00000464088 TOP1MTQ969P6 601 aa23.15■■□□□ 1.3
CD58-204ENST00000464088 PLIN2Q99541 437 aa23.15■■□□□ 1.3
CD58-204ENST00000464088 OSBPL7Q9BZF2 842 aa23.15■■□□□ 1.3
CD58-204ENST00000464088 BHMT2Q9H2M3 363 aa23.15■■□□□ 1.3
CD58-204ENST00000464088 NSUN3Q9H649 340 aaKnown RBP23.15■■□□□ 1.3
CD58-204ENST00000464088 CHMP5Q9NZZ3 219 aa23.15■■□□□ 1.3
CD58-204ENST00000464088 DNM3Q9UQ16 869 aa23.15■■□□□ 1.3
CD58-204ENST00000464088 CDY2AQ9Y6F7 541 aa23.15■■□□□ 1.3
CD58-204ENST00000464088 RBAK-RBAKDNI3L0D1 243 aa23.14■■□□□ 1.29
CD58-204ENST00000464088 NCLP19338 710 aaKnown RBP23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms