RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 RNF19AQ9NV58 838 aa14.46□□□□□ -0.09
XRN1-203ENST00000463916 PP2D1A8MPX8 630 aa14.45□□□□□ -0.1
XRN1-203ENST00000463916 ZSCAN20P17040 1043 aaPredicted RBP14.45□□□□□ -0.1
XRN1-203ENST00000463916 CDC25AP30304 524 aa14.45□□□□□ -0.1
XRN1-203ENST00000463916 CTNNB1P35222 781 aa14.45□□□□□ -0.1
XRN1-203ENST00000463916 GPM6BQ13491 265 aa14.45□□□□□ -0.1
XRN1-203ENST00000463916 FAM43BQ6ZT52 329 aaPredicted RBP14.45□□□□□ -0.1
XRN1-203ENST00000463916 IGSF22Q8N9C0 903 aa14.45□□□□□ -0.1
XRN1-203ENST00000463916 TMEM161AQ9NX61 479 aa14.45□□□□□ -0.1
XRN1-203ENST00000463916 FNDC1Q4ZHG4 1894 aaPredicted RBP14.45□□□□□ -0.1
XRN1-203ENST00000463916 C5orf67F2Z3F1 127 aa14.45□□□□□ -0.1
XRN1-203ENST00000463916 DGAT1O75907 488 aa14.45□□□□□ -0.1
XRN1-203ENST00000463916 XRCC6P12956 609 aaKnown RBP eCLIP14.45□□□□□ -0.1
XRN1-203ENST00000463916 ATF7P17544 494 aaPredicted RBP14.45□□□□□ -0.1
XRN1-203ENST00000463916 RILPL1Q5EBL4 403 aa14.45□□□□□ -0.1
XRN1-203ENST00000463916 ECHDC2Q86YB7 292 aa14.45□□□□□ -0.1
XRN1-203ENST00000463916 RNF149Q8NC42 400 aa14.45□□□□□ -0.1
XRN1-203ENST00000463916 ASAP3Q8TDY4 903 aa14.45□□□□□ -0.1
XRN1-203ENST00000463916 TCP11Q8WWU5 503 aa14.45□□□□□ -0.1
XRN1-203ENST00000463916 ELAC1Q9H777 363 aaKnown RBP14.45□□□□□ -0.1
XRN1-203ENST00000463916 LMCD1Q9NZU5 365 aa14.45□□□□□ -0.1
XRN1-203ENST00000463916 LRWD1Q9UFC0 647 aa14.45□□□□□ -0.1
XRN1-203ENST00000463916 RALGAPA2Q2PPJ7 1873 aa14.44□□□□□ -0.1
XRN1-203ENST00000463916 A0A0U1RQF3 1178 aa14.44□□□□□ -0.1
XRN1-203ENST00000463916 TBKBP1A7MCY6 615 aa14.44□□□□□ -0.1
XRN1-203ENST00000463916 GRM6O15303 877 aa14.44□□□□□ -0.1
XRN1-203ENST00000463916 GAS2O43903 313 aaKnown RBP14.44□□□□□ -0.1
XRN1-203ENST00000463916 ARL2P36404 184 aa14.44□□□□□ -0.1
XRN1-203ENST00000463916 PDIA5Q14554 519 aa14.44□□□□□ -0.1
XRN1-203ENST00000463916 MAEAQ7L5Y9 396 aa14.44□□□□□ -0.1
XRN1-203ENST00000463916 ZNF598Q86UK7 904 aaKnown RBP14.44□□□□□ -0.1
XRN1-203ENST00000463916 NACC1Q96RE7 527 aa14.44□□□□□ -0.1
XRN1-203ENST00000463916 ATP6V0A4Q9HBG4 840 aa14.44□□□□□ -0.1
XRN1-203ENST00000463916 GPRC5CQ9NQ84 441 aa14.44□□□□□ -0.1
XRN1-203ENST00000463916 KIAA1671Q9BY89 1806 aa14.44□□□□□ -0.1
XRN1-203ENST00000463916 MYO7AQ13402 2215 aa14.44□□□□□ -0.1
XRN1-203ENST00000463916 USO1O60763 962 aaKnown RBP14.43□□□□□ -0.1
XRN1-203ENST00000463916 SFPQP23246 707 aaKnown RBP eCLIP14.43□□□□□ -0.1
XRN1-203ENST00000463916 TFF2Q03403 129 aa14.43□□□□□ -0.1
XRN1-203ENST00000463916 LRRC55Q6ZSA7 311 aa14.43□□□□□ -0.1
XRN1-203ENST00000463916 CATSPER4Q7RTX7 472 aa14.43□□□□□ -0.1
XRN1-203ENST00000463916 RNF169Q8NCN4 708 aa14.43□□□□□ -0.1
XRN1-203ENST00000463916 ERMNQ8TAM6 284 aa14.43□□□□□ -0.1
XRN1-203ENST00000463916 MRPL38Q96DV4 380 aaKnown RBP14.43□□□□□ -0.1
XRN1-203ENST00000463916 INO80BQ9C086 356 aaPredicted RBP14.43□□□□□ -0.1
XRN1-203ENST00000463916 ALG13Q9NP73 1137 aaKnown RBP14.43□□□□□ -0.1
XRN1-203ENST00000463916 CHST12Q9NRB3 414 aa14.43□□□□□ -0.1
XRN1-203ENST00000463916 DBR1Q9UK59 544 aaKnown RBP14.43□□□□□ -0.1
XRN1-203ENST00000463916 PIN4Q9Y237 131 aaKnown RBP14.43□□□□□ -0.1
XRN1-203ENST00000463916 CUL9Q8IWT3 2517 aa14.43□□□□□ -0.1
XRN1-203ENST00000463916 ASAP2O43150 1006 aa14.43□□□□□ -0.1
XRN1-203ENST00000463916 RB1P06400 928 aa14.43□□□□□ -0.1
XRN1-203ENST00000463916 GLRA2P23416 452 aa14.43□□□□□ -0.1
XRN1-203ENST00000463916 HOXA11P31270 313 aaPredicted RBP14.43□□□□□ -0.1
XRN1-203ENST00000463916 CCT6AP40227 531 aaKnown RBP14.43□□□□□ -0.1
XRN1-203ENST00000463916 CAPSQ13938 189 aa14.43□□□□□ -0.1
XRN1-203ENST00000463916 CAMK1Q14012 370 aa14.43□□□□□ -0.1
XRN1-203ENST00000463916 SKIV2LQ15477 1246 aaKnown RBP14.43□□□□□ -0.1
XRN1-203ENST00000463916 LONRF3Q496Y0 759 aa14.43□□□□□ -0.1
XRN1-203ENST00000463916 CLLU1OSQ5K130 101 aa14.43□□□□□ -0.1
XRN1-203ENST00000463916 CASD1Q96PB1 797 aa14.43□□□□□ -0.1
XRN1-203ENST00000463916 MMTAG2Q9BU76 263 aaKnown RBP14.43□□□□□ -0.1
XRN1-203ENST00000463916 POLD4Q9HCU8 107 aa14.43□□□□□ -0.1
XRN1-203ENST00000463916 FOXD4L1Q9NU39 408 aa14.43□□□□□ -0.1
XRN1-203ENST00000463916 TYW1Q9NV66 732 aaKnown RBP14.43□□□□□ -0.1
XRN1-203ENST00000463916 MEIS3P2A8K0S8 358 aa14.42□□□□□ -0.1
XRN1-203ENST00000463916 LAD1O00515 517 aa14.42□□□□□ -0.1
XRN1-203ENST00000463916 DNAJB1P25685 340 aa14.42□□□□□ -0.1
XRN1-203ENST00000463916 PRPHP41219 470 aa14.42□□□□□ -0.1
XRN1-203ENST00000463916 PHKA2P46019 1235 aa14.42□□□□□ -0.1
XRN1-203ENST00000463916 PTENP60484 403 aa14.42□□□□□ -0.1
XRN1-203ENST00000463916 ATP2C1P98194 919 aaPredicted RBP14.42□□□□□ -0.1
XRN1-203ENST00000463916 MXD4Q14582 209 aaPredicted RBP14.42□□□□□ -0.1
XRN1-203ENST00000463916 TWF2Q6IBS0 349 aaKnown RBP14.42□□□□□ -0.1
XRN1-203ENST00000463916 DTHD1Q6ZMT9 781 aa14.42□□□□□ -0.1
XRN1-203ENST00000463916 SRGAP1Q7Z6B7 1085 aa14.42□□□□□ -0.1
XRN1-203ENST00000463916 CCDC43Q96MW1 224 aaKnown RBP14.42□□□□□ -0.1
XRN1-203ENST00000463916 TRAIPQ9BWF2 469 aa14.42□□□□□ -0.1
XRN1-203ENST00000463916 POLR3FQ9H1D9 316 aaPredicted RBP14.42□□□□□ -0.1
XRN1-203ENST00000463916 CWH43Q9H720 699 aa14.42□□□□□ -0.1
XRN1-203ENST00000463916 AGPAT5Q9NUQ2 364 aa14.42□□□□□ -0.1
XRN1-203ENST00000463916 DACT1Q9NYF0 836 aa14.42□□□□□ -0.1
XRN1-203ENST00000463916 PLAGL2Q9UPG8 496 aa14.42□□□□□ -0.1
XRN1-203ENST00000463916 KIAA1024Q9UPX6 916 aa14.42□□□□□ -0.1
XRN1-203ENST00000463916 KLHL23Q8NBE8 558 aa14.42□□□□□ -0.1
XRN1-203ENST00000463916 LPPQ93052 612 aa14.42□□□□□ -0.1
XRN1-203ENST00000463916 C11orf84Q9BUA3 381 aaPredicted RBP14.42□□□□□ -0.1
XRN1-203ENST00000463916 C5orf42Q9H799 3197 aa14.42□□□□□ -0.1
XRN1-203ENST00000463916 DDX19AQ9NUU7 478 aaKnown RBP14.42□□□□□ -0.1
XRN1-203ENST00000463916 THEGQ9P2T0 379 aa14.42□□□□□ -0.1
XRN1-203ENST00000463916 RWDD3Q9Y3V2 267 aa14.42□□□□□ -0.1
XRN1-203ENST00000463916 VPS37CA5D8V6 355 aaPredicted RBP14.41□□□□□ -0.1
XRN1-203ENST00000463916 CSPG5O95196 566 aa14.41□□□□□ -0.1
XRN1-203ENST00000463916 EOMESO95936 686 aa14.41□□□□□ -0.1
XRN1-203ENST00000463916 ITGB1P05556 798 aa14.41□□□□□ -0.1
XRN1-203ENST00000463916 HAUS3Q68CZ6 603 aa14.41□□□□□ -0.1
XRN1-203ENST00000463916 PADI6Q6TGC4 694 aa14.41□□□□□ -0.1
XRN1-203ENST00000463916 SNX29Q8TEQ0 813 aa14.41□□□□□ -0.1
XRN1-203ENST00000463916 PLVAPQ9BX97 442 aa14.41□□□□□ -0.1
XRN1-203ENST00000463916 COL25A1Q9BXS0 654 aaPredicted RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 180.3 ms