RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 A0A0C4DFX4 3053 aa21.01■□□□□ 0.95
LMNB1-204ENST00000463908 HIP1RO75146 1068 aa21■□□□□ 0.95
LMNB1-204ENST00000463908 RPS6KA5O75582 802 aa21■□□□□ 0.95
LMNB1-204ENST00000463908 GUCY2CP25092 1073 aa21■□□□□ 0.95
LMNB1-204ENST00000463908 CAPSQ13938 189 aa21■□□□□ 0.95
LMNB1-204ENST00000463908 RTN4RL1Q86UN2 441 aaPredicted RBP21■□□□□ 0.95
LMNB1-204ENST00000463908 FAM228AQ86W67 206 aa21■□□□□ 0.95
LMNB1-204ENST00000463908 TDHQ8IZJ6 230 aa21■□□□□ 0.95
LMNB1-204ENST00000463908 RNF149Q8NC42 400 aa21■□□□□ 0.95
LMNB1-204ENST00000463908 SEPT8Q92599 483 aa21■□□□□ 0.95
LMNB1-204ENST00000463908 IFIH1Q9BYX4 1025 aaKnown RBP21■□□□□ 0.95
LMNB1-204ENST00000463908 TMX1Q9H3N1 280 aa21■□□□□ 0.95
LMNB1-204ENST00000463908 MINDY3Q9H8M7 445 aa21■□□□□ 0.95
LMNB1-204ENST00000463908 STK17AQ9UEE5 414 aa21■□□□□ 0.95
LMNB1-204ENST00000463908 ST3GAL5Q9UNP4 418 aa21■□□□□ 0.95
LMNB1-204ENST00000463908 A0A1B0GVL5 298 aa20.99■□□□□ 0.95
LMNB1-204ENST00000463908 SFI1A8K8P3 1242 aa20.99■□□□□ 0.95
LMNB1-204ENST00000463908 FGFR4P22455 802 aa20.99■□□□□ 0.95
LMNB1-204ENST00000463908 PTENP60484 403 aa20.99■□□□□ 0.95
LMNB1-204ENST00000463908 POU5F1BQ06416 359 aa20.99■□□□□ 0.95
LMNB1-204ENST00000463908 RAD51AP2Q09MP3 1159 aa20.99■□□□□ 0.95
LMNB1-204ENST00000463908 GCOM2Q9BZD3 368 aaPredicted RBP20.99■□□□□ 0.95
LMNB1-204ENST00000463908 FAM13BQ9NYF5 915 aa20.99■□□□□ 0.95
LMNB1-204ENST00000463908 HPSEQ9Y251 543 aa20.99■□□□□ 0.95
LMNB1-204ENST00000463908 FAM237AA0A1B0GTK4 181 aa20.98■□□□□ 0.95
LMNB1-204ENST00000463908 A0A1W2PQ27 194 aa20.98■□□□□ 0.95
LMNB1-204ENST00000463908 A0A1W2PQ64 194 aa20.98■□□□□ 0.95
LMNB1-204ENST00000463908 A0A1W2PQD8 194 aa20.98■□□□□ 0.95
LMNB1-204ENST00000463908 POLR2DO15514 142 aaKnown RBP20.98■□□□□ 0.95
LMNB1-204ENST00000463908 STAT6P42226 847 aa20.98■□□□□ 0.95
LMNB1-204ENST00000463908 NFX1Q12986 1120 aaKnown RBP20.98■□□□□ 0.95
LMNB1-204ENST00000463908 GIT2Q14161 759 aa20.98■□□□□ 0.95
LMNB1-204ENST00000463908 IKBKEQ14164 716 aa20.98■□□□□ 0.95
LMNB1-204ENST00000463908 GPBP1Q86WP2 473 aa20.98■□□□□ 0.95
LMNB1-204ENST00000463908 KIFAP3Q92845 792 aa20.98■□□□□ 0.95
LMNB1-204ENST00000463908 SCLT1Q96NL6 688 aa20.98■□□□□ 0.95
LMNB1-204ENST00000463908 KCND2Q9NZV8 630 aa20.98■□□□□ 0.95
LMNB1-204ENST00000463908 KCNH3Q9ULD8 1083 aa20.98■□□□□ 0.95
LMNB1-204ENST00000463908 ABHD14A-ACY1A0A1B0GW23 586 aa20.97■□□□□ 0.95
LMNB1-204ENST00000463908 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.97■□□□□ 0.95
LMNB1-204ENST00000463908 MYMKA6NI61 221 aa20.97■□□□□ 0.95
LMNB1-204ENST00000463908 ENPP3O14638 875 aa20.97■□□□□ 0.95
LMNB1-204ENST00000463908 GPR182O15218 404 aa20.97■□□□□ 0.95
LMNB1-204ENST00000463908 ACTN1P12814 892 aa20.97■□□□□ 0.95
LMNB1-204ENST00000463908 PFKFB1P16118 471 aa20.97■□□□□ 0.95
LMNB1-204ENST00000463908 CACNB1Q02641 598 aaPredicted RBP20.97■□□□□ 0.95
LMNB1-204ENST00000463908 PAK2Q13177 524 aa20.97■□□□□ 0.95
LMNB1-204ENST00000463908 TPRNQ4KMQ1 711 aa20.97■□□□□ 0.95
LMNB1-204ENST00000463908 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.97■□□□□ 0.956e-6■□□□□ 8.1
LMNB1-204ENST00000463908 SV2BQ7L1I2 683 aa20.97■□□□□ 0.95
LMNB1-204ENST00000463908 SRGAP1Q7Z6B7 1085 aa20.97■□□□□ 0.95
LMNB1-204ENST00000463908 IFNLR1Q8IU57 520 aaPredicted RBP20.97■□□□□ 0.95
LMNB1-204ENST00000463908 IQUBQ8NA54 791 aa20.97■□□□□ 0.95
LMNB1-204ENST00000463908 LINC01599Q8WXQ3 324 aa20.97■□□□□ 0.95
LMNB1-204ENST00000463908 APBB2Q92870 758 aa20.97■□□□□ 0.95
LMNB1-204ENST00000463908 DHX58Q96C10 678 aa20.97■□□□□ 0.95
LMNB1-204ENST00000463908 RNPC3Q96LT9 517 aaKnown RBP20.97■□□□□ 0.95
LMNB1-204ENST00000463908 TIPINQ9BVW5 301 aa20.97■□□□□ 0.95
LMNB1-204ENST00000463908 CUL9Q8IWT3 2517 aa20.96■□□□□ 0.95
LMNB1-204ENST00000463908 SOX1O00570 391 aaPredicted RBP20.96■□□□□ 0.95
LMNB1-204ENST00000463908 MGEA5O60502 916 aa20.96■□□□□ 0.95
LMNB1-204ENST00000463908 BAIAP3O94812 1187 aa20.96■□□□□ 0.95
LMNB1-204ENST00000463908 TFDP1Q14186 410 aa20.96■□□□□ 0.95
LMNB1-204ENST00000463908 STAMQ92783 540 aa20.96■□□□□ 0.95
LMNB1-204ENST00000463908 REEP2Q9BRK0 252 aa20.96■□□□□ 0.95
LMNB1-204ENST00000463908 NFKBIZQ9BYH8 718 aa20.96■□□□□ 0.95
LMNB1-204ENST00000463908 GOLPH3LQ9H4A5 285 aa20.96■□□□□ 0.95
LMNB1-204ENST00000463908 KBTBD4Q9NVX7 518 aa20.96■□□□□ 0.95
LMNB1-204ENST00000463908 A0A1W2PPC1 479 aa20.95■□□□□ 0.94
LMNB1-204ENST00000463908 NDUFA8P51970 172 aa20.95■□□□□ 0.94
LMNB1-204ENST00000463908 WDR5P61964 334 aaKnown RBP20.95■□□□□ 0.94
LMNB1-204ENST00000463908 DSC3Q14574 896 aa20.95■□□□□ 0.94
LMNB1-204ENST00000463908 DRC1Q96MC2 740 aa20.95■□□□□ 0.94
LMNB1-204ENST00000463908 NTPCRQ9BSD7 190 aaKnown RBP20.95■□□□□ 0.94
LMNB1-204ENST00000463908 INO80BQ9C086 356 aaPredicted RBP20.95■□□□□ 0.94
LMNB1-204ENST00000463908 LOXHD1Q8IVV2 1947 aa20.95■□□□□ 0.94
LMNB1-204ENST00000463908 LRRIQ4A6NIV6 560 aa20.94■□□□□ 0.94
LMNB1-204ENST00000463908 ZBBXA8MT70 800 aa20.94■□□□□ 0.94
LMNB1-204ENST00000463908 NAMPTP43490 491 aa20.94■□□□□ 0.94
LMNB1-204ENST00000463908 PHKA2P46019 1235 aa20.94■□□□□ 0.94
LMNB1-204ENST00000463908 NPTX2P47972 431 aa20.94■□□□□ 0.94
LMNB1-204ENST00000463908 PEX3P56589 373 aa20.94■□□□□ 0.94
LMNB1-204ENST00000463908 DEFB103AP81534 67 aa20.94■□□□□ 0.94
LMNB1-204ENST00000463908 MBTD1Q05BQ5 628 aa20.94■□□□□ 0.94
LMNB1-204ENST00000463908 LONRF3Q496Y0 759 aa20.94■□□□□ 0.94
LMNB1-204ENST00000463908 CDCA2Q69YH5 1023 aaPredicted RBP20.94■□□□□ 0.94
LMNB1-204ENST00000463908 FAM109BQ6ICB4 259 aaPredicted RBP20.94■□□□□ 0.94
LMNB1-204ENST00000463908 DYMQ7RTS9 669 aa20.94■□□□□ 0.94
LMNB1-204ENST00000463908 FSIP1Q8NA03 581 aa20.94■□□□□ 0.94
LMNB1-204ENST00000463908 DDX12PQ92771 950 aa20.94■□□□□ 0.94
LMNB1-204ENST00000463908 DNAJC19Q96DA6 116 aa20.94■□□□□ 0.94
LMNB1-204ENST00000463908 KIFC3Q9BVG8 833 aa20.94■□□□□ 0.94
LMNB1-204ENST00000463908 CUEDC2Q9H467 287 aa20.94■□□□□ 0.94
LMNB1-204ENST00000463908 SERTAD1Q9UHV2 236 aa20.94■□□□□ 0.94
LMNB1-204ENST00000463908 SLC4A7Q9Y6M7 1214 aa20.94■□□□□ 0.94
LMNB1-204ENST00000463908 ADGRA3Q8IWK6 1321 aa20.94■□□□□ 0.94
LMNB1-204ENST00000463908 GRXCR1A8MXD5 290 aa20.93■□□□□ 0.94
LMNB1-204ENST00000463908 ACTN4O43707 911 aaKnown RBP20.93■□□□□ 0.94
LMNB1-204ENST00000463908 PLS3P13797 630 aa20.93■□□□□ 0.94
LMNB1-204ENST00000463908 HOXA11P31270 313 aaPredicted RBP20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms