RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 NECAB1Q8N987 351 aa12.62□□□□□ -0.39
SSR3-202ENST00000463503 RRP36Q96EU6 259 aaKnown RBP12.62□□□□□ -0.39
SSR3-202ENST00000463503 CASD1Q96PB1 797 aa12.62□□□□□ -0.39
SSR3-202ENST00000463503 RTP3Q9BQQ7 232 aa12.62□□□□□ -0.39
SSR3-202ENST00000463503 ELAC1Q9H777 363 aaKnown RBP12.62□□□□□ -0.39
SSR3-202ENST00000463503 PKD2L1Q9P0L9 805 aa12.62□□□□□ -0.39
SSR3-202ENST00000463503 PUF60Q9UHX1 559 aaKnown RBP12.62□□□□□ -0.39
SSR3-202ENST00000463503 ST3GAL5Q9UNP4 418 aa12.62□□□□□ -0.39
SSR3-202ENST00000463503 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.62□□□□□ -0.39
SSR3-202ENST00000463503 ZZEF1O43149 2961 aa12.61□□□□□ -0.39
SSR3-202ENST00000463503 RPS6KA5O75582 802 aa12.61□□□□□ -0.39
SSR3-202ENST00000463503 DEXIO95424 95 aa12.61□□□□□ -0.39
SSR3-202ENST00000463503 SSRP1Q08945 709 aaKnown RBP12.61□□□□□ -0.39
SSR3-202ENST00000463503 TDGQ13569 410 aa12.61□□□□□ -0.39
SSR3-202ENST00000463503 MTMR1Q13613 665 aa12.61□□□□□ -0.39
SSR3-202ENST00000463503 DSC3Q14574 896 aa12.61□□□□□ -0.39
SSR3-202ENST00000463503 PFKFB3Q16875 520 aaPredicted RBP12.61□□□□□ -0.39
SSR3-202ENST00000463503 TMC7Q7Z402 723 aa12.61□□□□□ -0.39
SSR3-202ENST00000463503 FAM228AQ86W67 206 aa12.61□□□□□ -0.39
SSR3-202ENST00000463503 CCDC83Q8IWF9 413 aa12.61□□□□□ -0.39
SSR3-202ENST00000463503 SIX5Q8N196 739 aa12.61□□□□□ -0.39
SSR3-202ENST00000463503 SLC39A11Q8N1S5 342 aa12.61□□□□□ -0.39
SSR3-202ENST00000463503 PLCD3Q8N3E9 789 aa12.61□□□□□ -0.39
SSR3-202ENST00000463503 NME8Q8N427 588 aa12.61□□□□□ -0.39
SSR3-202ENST00000463503 CYP2W1Q8TAV3 490 aa12.61□□□□□ -0.39
SSR3-202ENST00000463503 CDHR1Q96JP9 859 aa12.61□□□□□ -0.39
SSR3-202ENST00000463503 ZNF558Q96NG5 402 aa12.61□□□□□ -0.39
SSR3-202ENST00000463503 TMEM117Q9H0C3 514 aa12.61□□□□□ -0.39
SSR3-202ENST00000463503 JPH1Q9HDC5 661 aaPredicted RBP12.61□□□□□ -0.39
SSR3-202ENST00000463503 CYP26B1Q9NR63 512 aa12.61□□□□□ -0.39
SSR3-202ENST00000463503 DBR1Q9UK59 544 aaKnown RBP12.61□□□□□ -0.39
SSR3-202ENST00000463503 UBIAD1Q9Y5Z9 338 aa12.61□□□□□ -0.39
SSR3-202ENST00000463503 SPEGQ15772 3267 aa12.61□□□□□ -0.39
SSR3-202ENST00000463503 WDFY3Q8IZQ1 3526 aa12.61□□□□□ -0.39
SSR3-202ENST00000463503 FAM208BQ5VWN6 2430 aa12.61□□□□□ -0.39
SSR3-202ENST00000463503 ATRXP46100 2492 aa12.6□□□□□ -0.39
SSR3-202ENST00000463503 EPCAMP16422 314 aa12.6□□□□□ -0.39
SSR3-202ENST00000463503 PPP1R18Q6NYC8 613 aa12.6□□□□□ -0.39
SSR3-202ENST00000463503 KIAA0319LQ8IZA0 1049 aa12.6□□□□□ -0.39
SSR3-202ENST00000463503 KCNG4Q8TDN1 519 aa12.6□□□□□ -0.39
SSR3-202ENST00000463503 WASF1Q92558 559 aa12.6□□□□□ -0.39
SSR3-202ENST00000463503 ATP6V0A4Q9HBG4 840 aa12.6□□□□□ -0.39
SSR3-202ENST00000463503 SH3GLB2Q9NR46 395 aa12.6□□□□□ -0.39
SSR3-202ENST00000463503 DZANK1Q9NVP4 752 aa12.6□□□□□ -0.39
SSR3-202ENST00000463503 RNF216Q9NWF9 866 aaPredicted RBP12.6□□□□□ -0.39
SSR3-202ENST00000463503 SEC63Q9UGP8 760 aaKnown RBP12.6□□□□□ -0.39
SSR3-202ENST00000463503 GINS2Q9Y248 185 aa12.6□□□□□ -0.39
SSR3-202ENST00000463503 KRBA1A5PL33 1030 aa12.59□□□□□ -0.39
SSR3-202ENST00000463503 ZBTB42B2RXF5 422 aa12.59□□□□□ -0.39
SSR3-202ENST00000463503 NARSO43776 548 aaKnown RBP12.59□□□□□ -0.39
SSR3-202ENST00000463503 FDPSP14324 419 aaKnown RBP12.59□□□□□ -0.39
SSR3-202ENST00000463503 AKAP17AQ02040 695 aaKnown RBP12.59□□□□□ -0.39
SSR3-202ENST00000463503 CLLU1OSQ5K130 101 aa12.59□□□□□ -0.39
SSR3-202ENST00000463503 PLPPR4Q7Z2D5 763 aa12.59□□□□□ -0.39
SSR3-202ENST00000463503 TMEM173Q86WV6 379 aaPredicted RBP12.59□□□□□ -0.39
SSR3-202ENST00000463503 CMTR1Q8N1G2 835 aaKnown RBP12.59□□□□□ -0.39
SSR3-202ENST00000463503 DCLK2Q8N568 766 aa12.59□□□□□ -0.39
SSR3-202ENST00000463503 SLC22A17Q8WUG5 538 aa12.59□□□□□ -0.39
SSR3-202ENST00000463503 PHKBQ93100 1093 aa12.59□□□□□ -0.39
SSR3-202ENST00000463503 SLC26A6Q9BXS9 759 aa12.59□□□□□ -0.39
SSR3-202ENST00000463503 ZBP1Q9H171 429 aa12.59□□□□□ -0.39
SSR3-202ENST00000463503 KCNK12Q9HB15 430 aa12.59□□□□□ -0.39
SSR3-202ENST00000463503 SPG21Q9NZD8 308 aa12.59□□□□□ -0.39
SSR3-202ENST00000463503 DLGAP2Q9P1A6 1054 aa12.59□□□□□ -0.39
SSR3-202ENST00000463503 SLC9A2Q9UBY0 812 aa12.59□□□□□ -0.39
SSR3-202ENST00000463503 KIF3AQ9Y496 699 aa12.59□□□□□ -0.39
SSR3-202ENST00000463503 RBM19Q9Y4C8 960 aaKnown RBP12.59□□□□□ -0.39
SSR3-202ENST00000463503 V9GY48 417 aaPredicted RBP12.59□□□□□ -0.39
SSR3-202ENST00000463503 CEP295Q9C0D2 2601 aa12.59□□□□□ -0.39
SSR3-202ENST00000463503 TDRD15B5MCY1 1934 aaKnown RBP12.58□□□□□ -0.39
SSR3-202ENST00000463503 ESYT2A0FGR8 921 aa12.58□□□□□ -0.4
SSR3-202ENST00000463503 GPR182O15218 404 aa12.58□□□□□ -0.4
SSR3-202ENST00000463503 N4BP1O75113 896 aaKnown RBP12.58□□□□□ -0.4
SSR3-202ENST00000463503 PDIA4P13667 645 aaKnown RBP12.58□□□□□ -0.4
SSR3-202ENST00000463503 ANP32AP39687 249 aaKnown RBP12.58□□□□□ -0.4
SSR3-202ENST00000463503 ACTR2P61160 394 aa12.58□□□□□ -0.4
SSR3-202ENST00000463503 KRT17Q04695 432 aa12.58□□□□□ -0.4
SSR3-202ENST00000463503 ATAT1Q5SQI0 421 aa12.58□□□□□ -0.4
SSR3-202ENST00000463503 CCDC82Q8N4S0 544 aa12.58□□□□□ -0.4
SSR3-202ENST00000463503 PIBF1Q8WXW3 757 aa12.58□□□□□ -0.4
SSR3-202ENST00000463503 RIN2Q8WYP3 895 aaPredicted RBP12.58□□□□□ -0.4
SSR3-202ENST00000463503 RUBCNQ92622 972 aa12.58□□□□□ -0.4
SSR3-202ENST00000463503 OSMRQ99650 979 aa12.58□□□□□ -0.4
SSR3-202ENST00000463503 AZI2Q9H6S1 392 aa12.58□□□□□ -0.4
SSR3-202ENST00000463503 JADE2Q9NQC1 790 aa12.58□□□□□ -0.4
SSR3-202ENST00000463503 BARHL2Q9NY43 387 aa12.58□□□□□ -0.4
SSR3-202ENST00000463503 ORC3Q9UBD5 711 aaPredicted RBP12.58□□□□□ -0.4
SSR3-202ENST00000463503 IRAK3Q9Y616 596 aa12.58□□□□□ -0.4
SSR3-202ENST00000463503 COL1A2P08123 1366 aa12.57□□□□□ -0.4
SSR3-202ENST00000463503 IGKV6D-21A0A0A0MT36 114 aa12.57□□□□□ -0.4
SSR3-202ENST00000463503 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.57□□□□□ -0.4
SSR3-202ENST00000463503 HOXA2O43364 376 aa12.57□□□□□ -0.4
SSR3-202ENST00000463503 JAK2O60674 1132 aa12.57□□□□□ -0.4
SSR3-202ENST00000463503 GPR32O75388 356 aa12.57□□□□□ -0.4
SSR3-202ENST00000463503 KLRC1P26715 233 aa12.57□□□□□ -0.4
SSR3-202ENST00000463503 STAT5BP51692 787 aa12.57□□□□□ -0.4
SSR3-202ENST00000463503 ITGB3BPQ13352 177 aaPredicted RBP12.57□□□□□ -0.4
SSR3-202ENST00000463503 RSPO4Q2I0M5 234 aaPredicted RBP12.57□□□□□ -0.4
SSR3-202ENST00000463503 KIZQ2M2Z5 673 aa12.57□□□□□ -0.4
SSR3-202ENST00000463503 TMC5Q6UXY8 1006 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms