RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 LINC00301Q8NCQ3 95 aa19.67■□□□□ 0.74
VPS52-214ENST00000463486 SP7Q8TDD2 431 aaPredicted RBP19.67■□□□□ 0.74
VPS52-214ENST00000463486 NLRP4Q96MN2 994 aa19.67■□□□□ 0.74
VPS52-214ENST00000463486 CSRNP2Q9H175 543 aa19.67■□□□□ 0.74
VPS52-214ENST00000463486 ZNF576Q9H609 170 aa19.67■□□□□ 0.74
VPS52-214ENST00000463486 TFIP11Q9UBB9 837 aaKnown RBP19.67■□□□□ 0.74
VPS52-214ENST00000463486 DNM3Q9UQ16 869 aa19.67■□□□□ 0.74
VPS52-214ENST00000463486 ARHGEF35A5YM69 484 aa19.66■□□□□ 0.74
VPS52-214ENST00000463486 SLC26A4O43511 780 aa19.66■□□□□ 0.74
VPS52-214ENST00000463486 SRGAP2CP0DJJ0 459 aa19.66■□□□□ 0.74
VPS52-214ENST00000463486 PTENP60484 403 aa19.66■□□□□ 0.74
VPS52-214ENST00000463486 TAP1Q03518 808 aa19.66■□□□□ 0.74
VPS52-214ENST00000463486 CAPSQ13938 189 aa19.66■□□□□ 0.74
VPS52-214ENST00000463486 MXD4Q14582 209 aaPredicted RBP19.66■□□□□ 0.74
VPS52-214ENST00000463486 ZNF697Q5TEC3 545 aa19.66■□□□□ 0.74
VPS52-214ENST00000463486 CABP7Q86V35 215 aa19.66■□□□□ 0.74
VPS52-214ENST00000463486 MCPH1Q8NEM0 835 aa19.66■□□□□ 0.74
VPS52-214ENST00000463486 CLIC6Q96NY7 704 aa19.66■□□□□ 0.74
VPS52-214ENST00000463486 ADAM2Q99965 735 aa19.66■□□□□ 0.74
VPS52-214ENST00000463486 COL6A3P12111 3177 aa19.66■□□□□ 0.74
VPS52-214ENST00000463486 UPP2O95045 317 aa19.65■□□□□ 0.74
VPS52-214ENST00000463486 GRIN2CQ14957 1233 aa19.65■□□□□ 0.74
VPS52-214ENST00000463486 ODR4Q5SWX8 454 aa19.65■□□□□ 0.74
VPS52-214ENST00000463486 C1orf186Q6ZWK4 172 aa19.65■□□□□ 0.74
VPS52-214ENST00000463486 MAEAQ7L5Y9 396 aa19.65■□□□□ 0.74
VPS52-214ENST00000463486 DAW1Q8N136 415 aa19.65■□□□□ 0.74
VPS52-214ENST00000463486 RNF149Q8NC42 400 aa19.65■□□□□ 0.74
VPS52-214ENST00000463486 BSNDQ8WZ55 320 aa19.65■□□□□ 0.74
VPS52-214ENST00000463486 ZNF689Q96CS4 500 aaPredicted RBP19.65■□□□□ 0.74
VPS52-214ENST00000463486 EPSTI1Q96J88 318 aa19.65■□□□□ 0.74
VPS52-214ENST00000463486 FAM161BQ96MY7 647 aa19.65■□□□□ 0.74
VPS52-214ENST00000463486 PLIN2Q99541 437 aa19.65■□□□□ 0.74
VPS52-214ENST00000463486 CCSER1Q9C0I3 900 aa19.65■□□□□ 0.74
VPS52-214ENST00000463486 POLR3FQ9H1D9 316 aaPredicted RBP19.65■□□□□ 0.74
VPS52-214ENST00000463486 POLD4Q9HCU8 107 aa19.65■□□□□ 0.74
VPS52-214ENST00000463486 INSL6Q9Y581 213 aa19.65■□□□□ 0.74
VPS52-214ENST00000463486 MYH15Q9Y2K3 1946 aa19.64■□□□□ 0.74
VPS52-214ENST00000463486 DGKIO75912 1065 aa19.64■□□□□ 0.73
VPS52-214ENST00000463486 LINC00271P0C7V0 271 aa19.64■□□□□ 0.73
VPS52-214ENST00000463486 HOXA11P31270 313 aaPredicted RBP19.64■□□□□ 0.73
VPS52-214ENST00000463486 DDIT3P35638 169 aa19.64■□□□□ 0.73
VPS52-214ENST00000463486 SPECC1Q5M775 1068 aa19.64■□□□□ 0.73
VPS52-214ENST00000463486 RINT1Q6NUQ1 792 aa19.64■□□□□ 0.73
VPS52-214ENST00000463486 SLC24A5Q71RS6 500 aa19.64■□□□□ 0.73
VPS52-214ENST00000463486 SRGAP1Q7Z6B7 1085 aa19.64■□□□□ 0.73
VPS52-214ENST00000463486 CCDC43Q96MW1 224 aaKnown RBP19.64■□□□□ 0.73
VPS52-214ENST00000463486 SCLT1Q96NL6 688 aa19.64■□□□□ 0.73
VPS52-214ENST00000463486 ZBED2Q9BTP6 218 aa19.64■□□□□ 0.73
VPS52-214ENST00000463486 RUSC1Q9BVN2 902 aa19.64■□□□□ 0.73
VPS52-214ENST00000463486 NFKBIZQ9BYH8 718 aa19.64■□□□□ 0.73
VPS52-214ENST00000463486 SLC28A3Q9HAS3 691 aa19.64■□□□□ 0.73
VPS52-214ENST00000463486 BLOC1S4Q9NUP1 217 aa19.64■□□□□ 0.73
VPS52-214ENST00000463486 LINC01553A4QN01 128 aa19.63■□□□□ 0.73
VPS52-214ENST00000463486 UBA7P41226 1012 aa19.63■□□□□ 0.73
VPS52-214ENST00000463486 SARSP49591 514 aaKnown RBP19.63■□□□□ 0.73
VPS52-214ENST00000463486 SLC12A3P55017 1021 aa19.63■□□□□ 0.73
VPS52-214ENST00000463486 MAPK7Q13164 816 aa19.63■□□□□ 0.73
VPS52-214ENST00000463486 BECN1Q14457 450 aa19.63■□□□□ 0.73
VPS52-214ENST00000463486 KARSQ15046 597 aaKnown RBP19.63■□□□□ 0.73
VPS52-214ENST00000463486 ZRSR1Q15695 479 aaKnown RBP19.63■□□□□ 0.73
VPS52-214ENST00000463486 AMHR2Q16671 573 aa19.63■□□□□ 0.73
VPS52-214ENST00000463486 NPAS4Q8IUM7 802 aa19.63■□□□□ 0.73
VPS52-214ENST00000463486 SYT2Q8N9I0 419 aaPredicted RBP19.63■□□□□ 0.73
VPS52-214ENST00000463486 ZNF396Q96N95 335 aaPredicted RBP19.63■□□□□ 0.73
VPS52-214ENST00000463486 CDX2Q99626 313 aaPredicted RBP19.63■□□□□ 0.73
VPS52-214ENST00000463486 TRAIPQ9BWF2 469 aa19.63■□□□□ 0.73
VPS52-214ENST00000463486 INO80BQ9C086 356 aaPredicted RBP19.63■□□□□ 0.73
VPS52-214ENST00000463486 NT5C3AQ9H0P0 336 aa19.63■□□□□ 0.73
VPS52-214ENST00000463486 CHST12Q9NRB3 414 aa19.63■□□□□ 0.73
VPS52-214ENST00000463486 C1orf112Q9NSG2 853 aa19.63■□□□□ 0.73
VPS52-214ENST00000463486 MYO9BQ13459 2157 aa19.63■□□□□ 0.73
VPS52-214ENST00000463486 DENND3A2RUS2 1198 aa19.62■□□□□ 0.73
VPS52-214ENST00000463486 SLC34A2O95436 690 aa19.62■□□□□ 0.73
VPS52-214ENST00000463486 SFPQP23246 707 aaKnown RBP eCLIP19.62■□□□□ 0.73
VPS52-214ENST00000463486 MBTD1Q05BQ5 628 aa19.62■□□□□ 0.73
VPS52-214ENST00000463486 ARSHQ5FYA8 562 aa19.62■□□□□ 0.73
VPS52-214ENST00000463486 FAM102BQ5T8I3 360 aa19.62■□□□□ 0.73
VPS52-214ENST00000463486 PPP2R2DQ66LE6 453 aa19.62■□□□□ 0.73
VPS52-214ENST00000463486 CDCA2Q69YH5 1023 aaPredicted RBP19.62■□□□□ 0.73
VPS52-214ENST00000463486 ZNF598Q86UK7 904 aaKnown RBP19.62■□□□□ 0.73
VPS52-214ENST00000463486 KRI1Q8N9T8 703 aaKnown RBP19.62■□□□□ 0.73
VPS52-214ENST00000463486 SYMPKQ92797 1274 aaKnown RBP19.62■□□□□ 0.73
VPS52-214ENST00000463486 EPOPA6NHQ4 379 aa19.61■□□□□ 0.73
VPS52-214ENST00000463486 SPTLC2O15270 562 aa19.61■□□□□ 0.73
VPS52-214ENST00000463486 PPP6R2O75170 966 aa19.61■□□□□ 0.73
VPS52-214ENST00000463486 YEATS4O95619 227 aa19.61■□□□□ 0.73
VPS52-214ENST00000463486 PLA2G4BP0C869 781 aa19.61■□□□□ 0.73
VPS52-214ENST00000463486 ATF7P17544 494 aaPredicted RBP19.61■□□□□ 0.73
VPS52-214ENST00000463486 PLCG1P19174 1290 aa19.61■□□□□ 0.73
VPS52-214ENST00000463486 PHKA2P46019 1235 aa19.61■□□□□ 0.73
VPS52-214ENST00000463486 FOXD4L6Q3SYB3 417 aaPredicted RBP19.61■□□□□ 0.73
VPS52-214ENST00000463486 AXDND1Q5T1B0 1012 aaPredicted RBP19.61■□□□□ 0.73
VPS52-214ENST00000463486 FOXD4L3Q6VB84 417 aaPredicted RBP19.61■□□□□ 0.73
VPS52-214ENST00000463486 CHAMP1Q96JM3 812 aa19.61■□□□□ 0.73
VPS52-214ENST00000463486 ELAC1Q9H777 363 aaKnown RBP19.61■□□□□ 0.73
VPS52-214ENST00000463486 AGPAT5Q9NUQ2 364 aa19.61■□□□□ 0.73
VPS52-214ENST00000463486 RNF19AQ9NV58 838 aa19.61■□□□□ 0.73
VPS52-214ENST00000463486 EYSQ5T1H1 3165 aa19.61■□□□□ 0.73
VPS52-214ENST00000463486 A0A0U1RQF3 1178 aa19.6■□□□□ 0.73
VPS52-214ENST00000463486 TSPAN1O60635 241 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms