RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 VPS52Q8N1B4 723 aa17.73■□□□□ 0.43
SND1-203ENST00000463020 ZNF713Q8N859 430 aaPredicted RBP17.73■□□□□ 0.43
SND1-203ENST00000463020 SLC22A17Q8WUG5 538 aa17.73■□□□□ 0.43
SND1-203ENST00000463020 ZMYND12Q9H0C1 365 aa17.73■□□□□ 0.43
SND1-203ENST00000463020 RNF216Q9NWF9 866 aaPredicted RBP17.73■□□□□ 0.43
SND1-203ENST00000463020 PTPRZ1P23471 2315 aaPredicted RBP17.73■□□□□ 0.43
SND1-203ENST00000463020 DENND4AQ7Z401 1863 aa17.73■□□□□ 0.43
SND1-203ENST00000463020 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.72■□□□□ 0.43
SND1-203ENST00000463020 MAGEB2O15479 319 aa17.72■□□□□ 0.43
SND1-203ENST00000463020 CHMP2AO43633 222 aa17.72■□□□□ 0.43
SND1-203ENST00000463020 PI15O43692 258 aa17.72■□□□□ 0.43
SND1-203ENST00000463020 STBD1O95210 358 aa17.72■□□□□ 0.43
SND1-203ENST00000463020 ZSCAN20P17040 1043 aaPredicted RBP17.72■□□□□ 0.43
SND1-203ENST00000463020 ITIH3Q06033 890 aa17.72■□□□□ 0.43
SND1-203ENST00000463020 DHX32Q7L7V1 743 aaKnown RBP17.72■□□□□ 0.43
SND1-203ENST00000463020 TEX2Q8IWB9 1127 aa17.72■□□□□ 0.43
SND1-203ENST00000463020 UBALD2Q8IYN6 164 aa17.72■□□□□ 0.43
SND1-203ENST00000463020 MAP7D2Q96T17 732 aa17.72■□□□□ 0.43
SND1-203ENST00000463020 UNC45AQ9H3U1 944 aa17.72■□□□□ 0.43
SND1-203ENST00000463020 DNAJB4Q9UDY4 337 aa17.72■□□□□ 0.43
SND1-203ENST00000463020 SAMM50Q9Y512 469 aa17.72■□□□□ 0.43
SND1-203ENST00000463020 ESYT2A0FGR8 921 aa17.71■□□□□ 0.43
SND1-203ENST00000463020 ZC3H11AO75152 810 aaKnown RBP eCLIP17.71■□□□□ 0.43
SND1-203ENST00000463020 NPR3P17342 541 aa17.71■□□□□ 0.43
SND1-203ENST00000463020 CIITAP33076 1130 aa17.71■□□□□ 0.43
SND1-203ENST00000463020 NBL1P41271 181 aa17.71■□□□□ 0.43
SND1-203ENST00000463020 AFF1P51825 1210 aaKnown RBP17.71■□□□□ 0.43
SND1-203ENST00000463020 SETQ01105 290 aaPredicted RBP17.71■□□□□ 0.43
SND1-203ENST00000463020 TARBP2Q15633 366 aaKnown RBP17.71■□□□□ 0.43
SND1-203ENST00000463020 ASTLQ6HA08 431 aaPredicted RBP17.71■□□□□ 0.43
SND1-203ENST00000463020 KIAA1841Q6NSI8 718 aa17.71■□□□□ 0.43
SND1-203ENST00000463020 CES5AQ6NT32 575 aa17.71■□□□□ 0.43
SND1-203ENST00000463020 TMC5Q6UXY8 1006 aa17.71■□□□□ 0.43
SND1-203ENST00000463020 FAM43BQ6ZT52 329 aaPredicted RBP17.71■□□□□ 0.43
SND1-203ENST00000463020 REXO1Q8N1G1 1221 aaKnown RBP17.71■□□□□ 0.43
SND1-203ENST00000463020 NLRP7Q8WX94 980 aa17.71■□□□□ 0.43
SND1-203ENST00000463020 PHKBQ93100 1093 aa17.71■□□□□ 0.43
SND1-203ENST00000463020 NECTIN4Q96NY8 510 aa17.71■□□□□ 0.43
SND1-203ENST00000463020 NRDE2Q9H7Z3 1164 aa17.71■□□□□ 0.43
SND1-203ENST00000463020 DISC1Q9NRI5 854 aa17.71■□□□□ 0.43
SND1-203ENST00000463020 NAP1L2Q9ULW6 460 aaPredicted RBP17.71■□□□□ 0.43
SND1-203ENST00000463020 WDR64B1ANS9 1081 aa17.7■□□□□ 0.42
SND1-203ENST00000463020 MTHFRP42898 656 aa17.7■□□□□ 0.42
SND1-203ENST00000463020 PHKA2P46019 1235 aa17.7■□□□□ 0.42
SND1-203ENST00000463020 ZNF280BQ86YH2 543 aa17.7■□□□□ 0.42
SND1-203ENST00000463020 KSR1Q8IVT5 923 aa17.7■□□□□ 0.42
SND1-203ENST00000463020 ZDHHC14Q8IZN3 488 aa17.7■□□□□ 0.42
SND1-203ENST00000463020 TDRD5Q8NAT2 981 aaKnown RBP17.7■□□□□ 0.42
SND1-203ENST00000463020 TBC1D13Q9NVG8 400 aa17.7■□□□□ 0.42
SND1-203ENST00000463020 CEP131Q9UPN4 1083 aa17.7■□□□□ 0.42
SND1-203ENST00000463020 FAM186AA6NE01 2351 aa17.7■□□□□ 0.42
SND1-203ENST00000463020 A0A087WZ62 844 aa17.69■□□□□ 0.42
SND1-203ENST00000463020 EOMESO95936 686 aa17.69■□□□□ 0.42
SND1-203ENST00000463020 SLC11A1P49279 550 aa17.69■□□□□ 0.42
SND1-203ENST00000463020 IGSF21Q96ID5 467 aa17.69■□□□□ 0.42
SND1-203ENST00000463020 FAM167AQ96KS9 214 aa17.69■□□□□ 0.42
SND1-203ENST00000463020 SCLT1Q96NL6 688 aa17.69■□□□□ 0.42
SND1-203ENST00000463020 FDXACB1Q9BRP7 624 aaPredicted RBP17.69■□□□□ 0.42
SND1-203ENST00000463020 GLT8D2Q9H1C3 349 aa17.69■□□□□ 0.42
SND1-203ENST00000463020 DBR1Q9UK59 544 aaKnown RBP17.69■□□□□ 0.42
SND1-203ENST00000463020 INPP5FQ9Y2H2 1132 aa17.69■□□□□ 0.42
SND1-203ENST00000463020 N4BP1O75113 896 aaKnown RBP17.68■□□□□ 0.42
SND1-203ENST00000463020 GALTP07902 379 aa17.68■□□□□ 0.42
SND1-203ENST00000463020 CTSAP10619 480 aa17.68■□□□□ 0.42
SND1-203ENST00000463020 TMOD1P28289 359 aa17.68■□□□□ 0.42
SND1-203ENST00000463020 ALDH7A1P49419 539 aaKnown RBP17.68■□□□□ 0.42
SND1-203ENST00000463020 NUBP1P53384 320 aa17.68■□□□□ 0.42
SND1-203ENST00000463020 PTPN14Q15678 1187 aa17.68■□□□□ 0.42
SND1-203ENST00000463020 MTERF2Q49AM1 385 aa17.68■□□□□ 0.42
SND1-203ENST00000463020 DDX53Q86TM3 631 aaKnown RBP17.68■□□□□ 0.42
SND1-203ENST00000463020 SLC5A5Q92911 643 aa17.68■□□□□ 0.42
SND1-203ENST00000463020 TMEM169Q96HH4 297 aa17.68■□□□□ 0.42
SND1-203ENST00000463020 GBP3Q9H0R5 595 aa17.68■□□□□ 0.42
SND1-203ENST00000463020 C2orf16Q68DN1 1984 aa17.68■□□□□ 0.42
SND1-203ENST00000463020 IGKV6-21A0A0C4DH24 114 aa17.67■□□□□ 0.42
SND1-203ENST00000463020 NARSO43776 548 aaKnown RBP17.67■□□□□ 0.42
SND1-203ENST00000463020 OFD1O75665 1012 aa17.67■□□□□ 0.42
SND1-203ENST00000463020 SSBP05455 408 aaKnown RBP eCLIP17.67■□□□□ 0.42
SND1-203ENST00000463020 TBC1D8BQ0IIM8 1120 aa17.67■□□□□ 0.42
SND1-203ENST00000463020 NTRK3Q16288 839 aa17.67■□□□□ 0.42
SND1-203ENST00000463020 TSGA10IPQ3SY00 556 aa17.67■□□□□ 0.42
SND1-203ENST00000463020 FLCNQ8NFG4 579 aa17.67■□□□□ 0.42
SND1-203ENST00000463020 MRPL9Q9BYD2 267 aaKnown RBP17.67■□□□□ 0.42
SND1-203ENST00000463020 IRF2BPLQ9H1B7 796 aa17.67■□□□□ 0.42
SND1-203ENST00000463020 C6orf50Q9HD87 102 aa17.67■□□□□ 0.42
SND1-203ENST00000463020 NRBP2Q9NSY0 501 aa17.67■□□□□ 0.42
SND1-203ENST00000463020 DZANK1Q9NVP4 752 aa17.67■□□□□ 0.42
SND1-203ENST00000463020 VPS54Q9P1Q0 977 aa17.67■□□□□ 0.42
SND1-203ENST00000463020 SEPT9Q9UHD8 586 aaPredicted RBP17.67■□□□□ 0.42
SND1-203ENST00000463020 TCEAL9Q9UHQ7 104 aa17.67■□□□□ 0.42
SND1-203ENST00000463020 PIN4Q9Y237 131 aaKnown RBP17.67■□□□□ 0.42
SND1-203ENST00000463020 IRAK3Q9Y616 596 aa17.67■□□□□ 0.42
SND1-203ENST00000463020 CACNA1AO00555 2505 aa17.67■□□□□ 0.42
SND1-203ENST00000463020 NID2Q14112 1375 aa17.66■□□□□ 0.42
SND1-203ENST00000463020 PRPF3O43395 683 aaKnown RBP17.66■□□□□ 0.42
SND1-203ENST00000463020 PSMD10O75832 226 aa17.66■□□□□ 0.42
SND1-203ENST00000463020 DDHD2O94830 711 aa17.66■□□□□ 0.42
SND1-203ENST00000463020 TDP2O95551 362 aa17.66■□□□□ 0.42
SND1-203ENST00000463020 MYBP10242 640 aa17.66■□□□□ 0.42
SND1-203ENST00000463020 NOMO2Q5JPE7 1267 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms