RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 POTEMA6NI47 508 aa16.89■□□□□ 0.29
SMC4-204ENST00000462787 PDHBP11177 359 aa16.89■□□□□ 0.29
SMC4-204ENST00000462787 SERPINB4P48594 390 aa16.89■□□□□ 0.29
SMC4-204ENST00000462787 RSBN1LQ6PCB5 846 aaPredicted RBP16.89■□□□□ 0.29
SMC4-204ENST00000462787 SESTD1Q86VW0 696 aa16.89■□□□□ 0.29
SMC4-204ENST00000462787 SLC4A7Q9Y6M7 1214 aa16.89■□□□□ 0.29
SMC4-204ENST00000462787 FTLP02792 175 aaPredicted RBP16.88■□□□□ 0.29
SMC4-204ENST00000462787 BRDTQ58F21 947 aaPredicted RBP16.88■□□□□ 0.29
SMC4-204ENST00000462787 GLYCTKQ8IVS8 523 aa16.88■□□□□ 0.29
SMC4-204ENST00000462787 LRRC43Q8N309 656 aa16.88■□□□□ 0.29
SMC4-204ENST00000462787 DMGDHQ9UI17 866 aaKnown RBP16.88■□□□□ 0.29
SMC4-204ENST00000462787 hCG_2014768A0A024R1R8 64 aa16.88■□□□□ 0.29
SMC4-204ENST00000462787 PNMA6FA0A0J9YX94 578 aa16.88■□□□□ 0.29
SMC4-204ENST00000462787 ECE1P42892 770 aa16.88■□□□□ 0.29
SMC4-204ENST00000462787 DYNLT1P63172 113 aa16.88■□□□□ 0.29
SMC4-204ENST00000462787 KRT17Q04695 432 aa16.88■□□□□ 0.29
SMC4-204ENST00000462787 NSMFQ6X4W1 530 aa16.88■□□□□ 0.29
SMC4-204ENST00000462787 SFR1Q86XK3 245 aa16.88■□□□□ 0.29
SMC4-204ENST00000462787 RNF34Q969K3 372 aa16.88■□□□□ 0.29
SMC4-204ENST00000462787 DBR1Q9UK59 544 aaKnown RBP16.88■□□□□ 0.29
SMC4-204ENST00000462787 GSG1L2A8MUP6 293 aa16.88■□□□□ 0.29
SMC4-204ENST00000462787 EPHB1P54762 984 aa16.88■□□□□ 0.29
SMC4-204ENST00000462787 FIGNQ5HY92 759 aa16.88■□□□□ 0.29
SMC4-204ENST00000462787 RARS2Q5T160 578 aaKnown RBP16.88■□□□□ 0.29
SMC4-204ENST00000462787 TEDDM1Q5T9Z0 273 aa16.88■□□□□ 0.29
SMC4-204ENST00000462787 CDKAL1Q5VV42 579 aa16.88■□□□□ 0.29
SMC4-204ENST00000462787 IZUMO3Q5VZ72 239 aa16.88■□□□□ 0.29
SMC4-204ENST00000462787 JAMLQ86YT9 394 aa16.88■□□□□ 0.29
SMC4-204ENST00000462787 ATP11CQ8NB49 1132 aa16.88■□□□□ 0.29
SMC4-204ENST00000462787 CFAP36Q96G28 342 aa16.88■□□□□ 0.29
SMC4-204ENST00000462787 NUP85Q9BW27 656 aa16.88■□□□□ 0.29
SMC4-204ENST00000462787 SUCLA2Q9P2R7 463 aaPredicted RBP16.88■□□□□ 0.29
SMC4-204ENST00000462787 ROBO2Q9HCK4 1378 aa16.88■□□□□ 0.29
SMC4-204ENST00000462787 HNRNPDLO14979 420 aaKnown RBP16.88■□□□□ 0.29
SMC4-204ENST00000462787 LPXNO60711 386 aa16.88■□□□□ 0.29
SMC4-204ENST00000462787 KPNB1Q14974 876 aaKnown RBP16.88■□□□□ 0.29
SMC4-204ENST00000462787 DDX42Q86XP3 938 aaKnown RBP eCLIP16.88■□□□□ 0.29
SMC4-204ENST00000462787 MRPL46Q9H2W6 279 aaKnown RBP16.88■□□□□ 0.29
SMC4-204ENST00000462787 BARHL2Q9NY43 387 aa16.88■□□□□ 0.29
SMC4-204ENST00000462787 HPS5Q9UPZ3 1129 aa16.88■□□□□ 0.29
SMC4-204ENST00000462787 THRAP3Q9Y2W1 955 aaKnown RBP16.88■□□□□ 0.29
SMC4-204ENST00000462787 ZNF711Q9Y462 761 aa16.88■□□□□ 0.29
SMC4-204ENST00000462787 O00370 1275 aa16.87■□□□□ 0.29
SMC4-204ENST00000462787 HSPA8P11142 646 aaKnown RBP16.87■□□□□ 0.29
SMC4-204ENST00000462787 SLC26A7Q8TE54 656 aa16.87■□□□□ 0.29
SMC4-204ENST00000462787 E9PCH4 1651 aa16.87■□□□□ 0.29
SMC4-204ENST00000462787 OCA2Q04671 838 aa16.87■□□□□ 0.29
SMC4-204ENST00000462787 HIC1Q14526 733 aa16.87■□□□□ 0.29
SMC4-204ENST00000462787 PREPLQ4J6C6 727 aaPredicted RBP16.87■□□□□ 0.29
SMC4-204ENST00000462787 MDM1Q8TC05 714 aa16.87■□□□□ 0.29
SMC4-204ENST00000462787 DTX3LQ8TDB6 740 aa16.87■□□□□ 0.29
SMC4-204ENST00000462787 BHMT2Q9H2M3 363 aa16.87■□□□□ 0.29
SMC4-204ENST00000462787 TULP4Q9NRJ4 1543 aa16.87■□□□□ 0.29
SMC4-204ENST00000462787 EEF1B2P24534 225 aaKnown RBP16.87■□□□□ 0.29
SMC4-204ENST00000462787 CYLC2Q14093 348 aaPredicted RBP16.87■□□□□ 0.29
SMC4-204ENST00000462787 GRM4Q14833 912 aa16.87■□□□□ 0.29
SMC4-204ENST00000462787 FOXP3Q9BZS1 431 aa16.87■□□□□ 0.29
SMC4-204ENST00000462787 RANBP17Q9H2T7 1088 aaKnown RBP16.87■□□□□ 0.29
SMC4-204ENST00000462787 ABCD1P33897 745 aa16.87■□□□□ 0.29
SMC4-204ENST00000462787 HERVK_113P62684 666 aa16.87■□□□□ 0.29
SMC4-204ENST00000462787 LONRF1Q17RB8 773 aa16.87■□□□□ 0.29
SMC4-204ENST00000462787 ATL2Q8NHH9 583 aa16.87■□□□□ 0.29
SMC4-204ENST00000462787 DEPDC1BQ8WUY9 529 aa16.87■□□□□ 0.29
SMC4-204ENST00000462787 MAP3K14Q99558 947 aa16.87■□□□□ 0.29
SMC4-204ENST00000462787 PABPC3Q9H361 631 aaKnown RBP16.87■□□□□ 0.29
SMC4-204ENST00000462787 DDX20Q9UHI6 824 aaKnown RBP16.87■□□□□ 0.29
SMC4-204ENST00000462787 PNPLA7Q6ZV29 1317 aa16.86■□□□□ 0.29
SMC4-204ENST00000462787 CNGA1P29973 690 aa16.86■□□□□ 0.29
SMC4-204ENST00000462787 PAPOLAP51003 745 aaKnown RBP16.86■□□□□ 0.29
SMC4-204ENST00000462787 AENQ8WTP8 325 aaKnown RBP16.86■□□□□ 0.29
SMC4-204ENST00000462787 NAF1Q96HR8 494 aaKnown RBP16.86■□□□□ 0.29
SMC4-204ENST00000462787 HEMGNQ9BXL5 484 aa16.86■□□□□ 0.29
SMC4-204ENST00000462787 EIF2AQ9BY44 585 aaKnown RBP16.86■□□□□ 0.29
SMC4-204ENST00000462787 TRIM15Q9C019 465 aa16.86■□□□□ 0.29
SMC4-204ENST00000462787 NBPF3Q9H094 633 aa16.86■□□□□ 0.29
SMC4-204ENST00000462787 ZNF804BA4D1E1 1349 aa16.86■□□□□ 0.29
SMC4-204ENST00000462787 PYGBP11216 843 aa16.86■□□□□ 0.29
SMC4-204ENST00000462787 KPNA2P52292 529 aaKnown RBP16.86■□□□□ 0.29
SMC4-204ENST00000462787 RAPH1Q70E73 1250 aa16.86■□□□□ 0.29
SMC4-204ENST00000462787 BZW1Q7L1Q6 419 aaKnown RBP16.86■□□□□ 0.29
SMC4-204ENST00000462787 RIBC1Q8N443 379 aaPredicted RBP16.86■□□□□ 0.29
SMC4-204ENST00000462787 KCTD6Q8NC69 237 aa16.86■□□□□ 0.29
SMC4-204ENST00000462787 INTS2Q9H0H0 1204 aaKnown RBP16.86■□□□□ 0.29
SMC4-204ENST00000462787 TFR2Q9UP52 801 aa16.86■□□□□ 0.29
SMC4-204ENST00000462787 AK9Q5TCS8 1911 aa16.86■□□□□ 0.29
SMC4-204ENST00000462787 USP17L8P0C7I0 530 aa16.86■□□□□ 0.29
SMC4-204ENST00000462787 KLRC1P26715 233 aa16.86■□□□□ 0.29
SMC4-204ENST00000462787 IL6STP40189 918 aaPredicted RBP16.86■□□□□ 0.29
SMC4-204ENST00000462787 UBE2SQ16763 222 aa16.86■□□□□ 0.29
SMC4-204ENST00000462787 PAPOLBQ9NRJ5 636 aaKnown RBP16.86■□□□□ 0.29
SMC4-204ENST00000462787 USP17L3A6NCW0 530 aa16.86■□□□□ 0.29
SMC4-204ENST00000462787 USP17L4A6NCW7 530 aa16.86■□□□□ 0.29
SMC4-204ENST00000462787 A6NJR5 290 aa16.86■□□□□ 0.29
SMC4-204ENST00000462787 GNPATO15228 680 aa16.86■□□□□ 0.29
SMC4-204ENST00000462787 USP17L1Q7RTZ2 530 aa16.86■□□□□ 0.29
SMC4-204ENST00000462787 ATG9AQ7Z3C6 839 aa16.86■□□□□ 0.29
SMC4-204ENST00000462787 ZKSCAN4Q969J2 545 aaPredicted RBP16.86■□□□□ 0.29
SMC4-204ENST00000462787 ALKBH8Q96BT7 664 aaKnown RBP16.86■□□□□ 0.29
SMC4-204ENST00000462787 HIC2Q96JB3 615 aa16.86■□□□□ 0.29
SMC4-204ENST00000462787 ZNF577Q9BSK1 485 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms