RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 FUCA1P04066 466 aa8.81□□□□□ -1
UBE4B-204ENST00000462658 SERPINB2P05120 415 aa8.81□□□□□ -1
UBE4B-204ENST00000462658 C6orf222P0C671 652 aaPredicted RBP8.81□□□□□ -1
UBE4B-204ENST00000462658 IGHMBP2P38935 993 aaKnown RBP8.81□□□□□ -1
UBE4B-204ENST00000462658 BCL6P41182 706 aa8.81□□□□□ -1
UBE4B-204ENST00000462658 METTL24Q5JXM2 366 aa8.81□□□□□ -1
UBE4B-204ENST00000462658 TEX2Q8IWB9 1127 aa8.81□□□□□ -1
UBE4B-204ENST00000462658 NLGN1Q8N2Q7 840 aa8.81□□□□□ -1
UBE4B-204ENST00000462658 CNBD1Q8NA66 436 aa8.81□□□□□ -1
UBE4B-204ENST00000462658 NLGN2Q8NFZ4 835 aa8.81□□□□□ -1
UBE4B-204ENST00000462658 DCAF4Q8WV16 495 aa8.81□□□□□ -1
UBE4B-204ENST00000462658 RILPL2Q969X0 211 aa8.81□□□□□ -1
UBE4B-204ENST00000462658 NEUROD6Q96NK8 337 aa8.81□□□□□ -1
UBE4B-204ENST00000462658 MPHOSPH8Q99549 860 aa8.81□□□□□ -1
UBE4B-204ENST00000462658 MTA3Q9BTC8 594 aa8.81□□□□□ -1
UBE4B-204ENST00000462658 KCNK12Q9HB15 430 aa8.81□□□□□ -1
UBE4B-204ENST00000462658 PDLIM7Q9NR12 457 aa8.81□□□□□ -1
UBE4B-204ENST00000462658 TIMM13Q9Y5L4 95 aaPredicted RBP8.81□□□□□ -1
UBE4B-204ENST00000462658 RTL9Q8NET4 1388 aa8.81□□□□□ -1
UBE4B-204ENST00000462658 A0A1W2PQJ5 194 aa8.8□□□□□ -1
UBE4B-204ENST00000462658 MAP4K4O95819 1239 aaPredicted RBP8.8□□□□□ -1
UBE4B-204ENST00000462658 FPR2P25090 351 aa8.8□□□□□ -1
UBE4B-204ENST00000462658 PDE6BP35913 854 aa8.8□□□□□ -1
UBE4B-204ENST00000462658 CORO7P57737 925 aa8.8□□□□□ -1
UBE4B-204ENST00000462658 TIMM10P62072 90 aa8.8□□□□□ -1
UBE4B-204ENST00000462658 RPL11P62913 178 aaKnown RBP8.8□□□□□ -1
UBE4B-204ENST00000462658 ZC3H12BQ5HYM0 836 aaKnown RBP8.8□□□□□ -1
UBE4B-204ENST00000462658 BICRALQ6AI39 1079 aa8.8□□□□□ -1
UBE4B-204ENST00000462658 PRR5LQ6MZQ0 368 aa8.8□□□□□ -1
UBE4B-204ENST00000462658 LZTR1Q8N653 840 aa8.8□□□□□ -1
UBE4B-204ENST00000462658 CHAMP1Q96JM3 812 aa8.8□□□□□ -1
UBE4B-204ENST00000462658 CDC5LQ99459 802 aaKnown RBP8.8□□□□□ -1
UBE4B-204ENST00000462658 MTFR1LQ9H019 292 aa8.8□□□□□ -1
UBE4B-204ENST00000462658 SLC6A17Q9H1V8 727 aa8.8□□□□□ -1
UBE4B-204ENST00000462658 SPON1Q9HCB6 807 aa8.8□□□□□ -1
UBE4B-204ENST00000462658 DBNLQ9UJU6 430 aaKnown RBP8.8□□□□□ -1
UBE4B-204ENST00000462658 ABCC12Q96J65 1359 aa8.8□□□□□ -1
UBE4B-204ENST00000462658 MROH5Q6ZUA9 1318 aa8.8□□□□□ -1
UBE4B-204ENST00000462658 A0A1B0GUL7 405 aa8.79□□□□□ -1
UBE4B-204ENST00000462658 POLRMTO00411 1230 aaKnown RBP8.79□□□□□ -1
UBE4B-204ENST00000462658 ATP5JP18859 108 aa8.79□□□□□ -1
UBE4B-204ENST00000462658 ARL4AP40617 200 aa8.79□□□□□ -1
UBE4B-204ENST00000462658 ST5P78524 1137 aa8.79□□□□□ -1
UBE4B-204ENST00000462658 CASC1Q6TDU7 716 aa8.79□□□□□ -1
UBE4B-204ENST00000462658 PRR23BQ6ZRT6 265 aa8.79□□□□□ -1
UBE4B-204ENST00000462658 ANKRD18AQ8IVF6 992 aa8.79□□□□□ -1
UBE4B-204ENST00000462658 CNTROBQ8N137 903 aa8.79□□□□□ -1
UBE4B-204ENST00000462658 PLEKHO2Q8TD55 490 aa8.79□□□□□ -1
UBE4B-204ENST00000462658 USP33Q8TEY7 942 aa8.79□□□□□ -1
UBE4B-204ENST00000462658 DIRC2Q96SL1 478 aa8.79□□□□□ -1
UBE4B-204ENST00000462658 UPF2Q9HAU5 1272 aaKnown RBP8.79□□□□□ -1
UBE4B-204ENST00000462658 TNFRSF12AQ9NP84 129 aa8.79□□□□□ -1
UBE4B-204ENST00000462658 GPR27Q9NS67 375 aa8.79□□□□□ -1
UBE4B-204ENST00000462658 PPARGC1AQ9UBK2 798 aaKnown RBP8.79□□□□□ -1
UBE4B-204ENST00000462658 KIF13BQ9NQT8 1826 aa8.79□□□□□ -1
UBE4B-204ENST00000462658 DDX60Q8IY21 1712 aaKnown RBP8.78□□□□□ -1
UBE4B-204ENST00000462658 MYO1BO43795 1136 aa8.78□□□□□ -1
UBE4B-204ENST00000462658 EIF5BO60841 1220 aaKnown RBP8.78□□□□□ -1
UBE4B-204ENST00000462658 PDE8BO95263 885 aa8.78□□□□□ -1
UBE4B-204ENST00000462658 RPS8P62241 208 aaKnown RBP8.78□□□□□ -1
UBE4B-204ENST00000462658 DDR1Q08345 913 aa8.78□□□□□ -1
UBE4B-204ENST00000462658 CBX2Q14781 532 aaPredicted RBP8.78□□□□□ -1
UBE4B-204ENST00000462658 MLANAQ16655 118 aa8.78□□□□□ -1
UBE4B-204ENST00000462658 ATP2B3Q16720 1220 aa8.78□□□□□ -1
UBE4B-204ENST00000462658 GORABQ5T7V8 394 aa8.78□□□□□ -1
UBE4B-204ENST00000462658 STYK1Q6J9G0 422 aa8.78□□□□□ -1
UBE4B-204ENST00000462658 CEP68Q76N32 757 aa8.78□□□□□ -1
UBE4B-204ENST00000462658 DDX46Q7L014 1031 aaKnown RBP8.78□□□□□ -1
UBE4B-204ENST00000462658 VGLL2Q8N8G2 317 aa8.78□□□□□ -1
UBE4B-204ENST00000462658 BOLA2Q9H3K6 86 aa8.78□□□□□ -1
UBE4B-204ENST00000462658 RXFP1Q9HBX9 757 aa8.78□□□□□ -1
UBE4B-204ENST00000462658 TMEM260Q9NX78 707 aa8.78□□□□□ -1
UBE4B-204ENST00000462658 NUDT19A8MXV4 375 aa8.77□□□□□ -1.01
UBE4B-204ENST00000462658 PPP1R12AO14974 1030 aaPredicted RBP8.77□□□□□ -1.01
UBE4B-204ENST00000462658 CHMLP26374 656 aa8.77□□□□□ -1.01
UBE4B-204ENST00000462658 ERVFRD-1P60508 538 aa8.77□□□□□ -1.01
UBE4B-204ENST00000462658 PUM3Q15397 648 aaKnown RBP8.77□□□□□ -1.01
UBE4B-204ENST00000462658 CCDC158Q5M9N0 1113 aa8.77□□□□□ -1.01
UBE4B-204ENST00000462658 RSPO2Q6UXX9 243 aaPredicted RBP8.77□□□□□ -1.01
UBE4B-204ENST00000462658 LPIN2Q92539 896 aa8.77□□□□□ -1.01
UBE4B-204ENST00000462658 CELF1Q92879 486 aaKnown RBP8.77□□□□□ -1.01
UBE4B-204ENST00000462658 EVI5LQ96CN4 794 aa8.77□□□□□ -1.01
UBE4B-204ENST00000462658 NSUN3Q9H649 340 aaKnown RBP8.77□□□□□ -1.01
UBE4B-204ENST00000462658 FANCLQ9NW38 375 aa8.77□□□□□ -1.01
UBE4B-204ENST00000462658 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.77□□□□□ -1.01
UBE4B-204ENST00000462658 NDOR1Q9UHB4 597 aa8.77□□□□□ -1.01
UBE4B-204ENST00000462658 MYH3P11055 1940 aa8.77□□□□□ -1.01
UBE4B-204ENST00000462658 ZNF609O15014 1411 aa8.77□□□□□ -1.01
UBE4B-204ENST00000462658 RIC1Q4ADV7 1423 aa8.77□□□□□ -1.01
UBE4B-204ENST00000462658 LAMB2P55268 1798 aa8.76□□□□□ -1.01
UBE4B-204ENST00000462658 OR14I1A6ND48 311 aa8.76□□□□□ -1.01
UBE4B-204ENST00000462658 LRRC10BA6NIK2 292 aa8.76□□□□□ -1.01
UBE4B-204ENST00000462658 C22orf46C9J442 243 aa8.76□□□□□ -1.01
UBE4B-204ENST00000462658 TAF5LO75529 589 aa8.76□□□□□ -1.01
UBE4B-204ENST00000462658 ASMTLO95671 621 aa8.76□□□□□ -1.01
UBE4B-204ENST00000462658 DBHP09172 617 aa8.76□□□□□ -1.01
UBE4B-204ENST00000462658 MMP10P09238 476 aa8.76□□□□□ -1.01
UBE4B-204ENST00000462658 FGFR2P21802 821 aa8.76□□□□□ -1.01
UBE4B-204ENST00000462658 ADORA1P30542 326 aa8.76□□□□□ -1.01
UBE4B-204ENST00000462658 CHRNDQ07001 517 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms